Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is mosC [H]
Identifier: 187736042
GI number: 187736042
Start: 1864700
End: 1865860
Strand: Direct
Name: mosC [H]
Synonym: Amuc_1552
Alternate gene names: 187736042
Gene position: 1864700-1865860 (Clockwise)
Preceding gene: 187736041
Following gene: 187736043
Centisome position: 69.99
GC content: 56.5
Gene sequence:
>1161_bases ATGAATATGCCTCTTCCTAAAACGACGCAAGGTGTTTATCGTCTGTCGGTCAGTACCTTTTATTTTCTTCAGGGTTTGGT GTTCGCCAGTTGGGCATCCCGCATCCCGGACATCAAAAGTGCATTGGGGTTGAACGATGCCGACTTGGGGTCCGTTCTCT TTGCCGTCCCGGTGGGGCAGATGTCCGCCATGGCGCTATCCGGTTACCTGGTTGGCCGTTGCGGCAGCCGGAAAATACTG ATGGCGGCATCCGTCTTTTATCCTGCCGTGCTTGTATGCCTGGGTATGGCGGGGTCTTTCTGGGAACTGGCGGCCGGGTT ATTTTTCTTTGGGGTAGCCGCAAATCTGACGAATATATCCGTCAATACGCAGGGAGTGGGAGTGGAACGGCTGTACCAGT GCAGCATCATGGCCCGGTTCCACGGTTTATGGAGCCTGGCGGGTTTTTTCGGAGCTTTGCTGGGAGCTGCCATGGTGGAC TGGCATATTTCTGCGGAAACGCATTTCATCGCCATTTTCCTGATATGCATGATTATTCTGGCCGTTTTTTCCCCCTCTCT TCTGCCGAGGGATGCCCGGCGTTCCTCCTCCCAGGGAGGCGGCATGTTCCGGAGCATGGATGCTTATGTACTGGTCATCG GGCTGATCGCCTTCGGAAGCATGGTGAGCGAAGGAACCATGTTTGACTGGAGCGGCGTGTACTTTGAAAGCGTGGTAAAA CCCGGTCCGGGGCTGGTGCAGATGGGATACGTGGCATTCATGAGCACCATGGCCCTGGGGCGTTTTACGGCAGACCGCCT GGTGATGCGCTTCGGGCCTGTGCGGGTTCTGCGCGCCAGCGGCATCCTTATTGCCTCCGGATTGCTCGTCTCCGTCCTGT TCCCGATGCTGTGGTCCGCCACGCTGGGCTTTCTGCTGGTGGGTTTTGGCACCTCTTCCATTGTCCCGCTCTGCTACAGC ATGGCCGGGAAATCCCGGAAAATGATTCCCAGCATGGCGCTGGCTTCCGTTTCTACCATCGGCTTTCTGGGGTTCCTGAT GGGGCCGCCGGTCATTGGTCATATTGCCCATGCTTCCTCCCTCCGGTGGTCTTTCTCCCTGATTGCCCTGGTTGGACTGG GGACGGCATTCATTGCCCCTTTCCTCAAGAAATATAGGTAA
Upstream 100 bases:
>100_bases CGGATGCCTGTTTGCATGTAAAATCATATTGTACAAAAGATGATTTCTCTTGCCAGAAGAGTGGAATAGGGATAGCGTTT GCGCGATCAGGAAATTCATC
Downstream 100 bases:
>100_bases TCACTGTTAATGATATGCCTATATTGTGAAATGGTGCGCCTGGCAGGACTCGAACCTGTACGCCTTTCGGCACCAGATCC TAAGTCTGGCGCGTCTACCA
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 386
Protein sequence:
>386_residues MNMPLPKTTQGVYRLSVSTFYFLQGLVFASWASRIPDIKSALGLNDADLGSVLFAVPVGQMSAMALSGYLVGRCGSRKIL MAASVFYPAVLVCLGMAGSFWELAAGLFFFGVAANLTNISVNTQGVGVERLYQCSIMARFHGLWSLAGFFGALLGAAMVD WHISAETHFIAIFLICMIILAVFSPSLLPRDARRSSSQGGGMFRSMDAYVLVIGLIAFGSMVSEGTMFDWSGVYFESVVK PGPGLVQMGYVAFMSTMALGRFTADRLVMRFGPVRVLRASGILIASGLLVSVLFPMLWSATLGFLLVGFGTSSIVPLCYS MAGKSRKMIPSMALASVSTIGFLGFLMGPPVIGHIAHASSLRWSFSLIALVGLGTAFIAPFLKKYR
Sequences:
>Translated_386_residues MNMPLPKTTQGVYRLSVSTFYFLQGLVFASWASRIPDIKSALGLNDADLGSVLFAVPVGQMSAMALSGYLVGRCGSRKIL MAASVFYPAVLVCLGMAGSFWELAAGLFFFGVAANLTNISVNTQGVGVERLYQCSIMARFHGLWSLAGFFGALLGAAMVD WHISAETHFIAIFLICMIILAVFSPSLLPRDARRSSSQGGGMFRSMDAYVLVIGLIAFGSMVSEGTMFDWSGVYFESVVK PGPGLVQMGYVAFMSTMALGRFTADRLVMRFGPVRVLRASGILIASGLLVSVLFPMLWSATLGFLLVGFGTSSIVPLCYS MAGKSRKMIPSMALASVSTIGFLGFLMGPPVIGHIAHASSLRWSFSLIALVGLGTAFIAPFLKKYR >Mature_386_residues MNMPLPKTTQGVYRLSVSTFYFLQGLVFASWASRIPDIKSALGLNDADLGSVLFAVPVGQMSAMALSGYLVGRCGSRKIL MAASVFYPAVLVCLGMAGSFWELAAGLFFFGVAANLTNISVNTQGVGVERLYQCSIMARFHGLWSLAGFFGALLGAAMVD WHISAETHFIAIFLICMIILAVFSPSLLPRDARRSSSQGGGMFRSMDAYVLVIGLIAFGSMVSEGTMFDWSGVYFESVVK PGPGLVQMGYVAFMSTMALGRFTADRLVMRFGPVRVLRASGILIASGLLVSVLFPMLWSATLGFLLVGFGTSSIVPLCYS MAGKSRKMIPSMALASVSTIGFLGFLMGPPVIGHIAHASSLRWSFSLIALVGLGTAFIAPFLKKYR
Specific function: May be a membrane transport protein that could either transport a precursor for rhizopine biosynthesis into bacteroids or the finished product from the bacteroids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787068, Length=352, Percent_Identity=29.8295454545455, Blast_Score=138, Evalue=6e-34,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41297; Mature: 41297
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPLPKTTQGVYRLSVSTFYFLQGLVFASWASRIPDIKSALGLNDADLGSVLFAVPVGQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCH MSAMALSGYLVGRCGSRKILMAASVFYPAVLVCLGMAGSFWELAAGLFFFGVAANLTNIS HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEE VNTQGVGVERLYQCSIMARFHGLWSLAGFFGALLGAAMVDWHISAETHFIAIFLICMIIL ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH AVFSPSLLPRDARRSSSQGGGMFRSMDAYVLVIGLIAFGSMVSEGTMFDWSGVYFESVVK HHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHC PGPGLVQMGYVAFMSTMALGRFTADRLVMRFGPVRVLRASGILIASGLLVSVLFPMLWSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH TLGFLLVGFGTSSIVPLCYSMAGKSRKMIPSMALASVSTIGFLGFLMGPPVIGHIAHASS HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LRWSFSLIALVGLGTAFIAPFLKKYR HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNMPLPKTTQGVYRLSVSTFYFLQGLVFASWASRIPDIKSALGLNDADLGSVLFAVPVGQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHCCCH MSAMALSGYLVGRCGSRKILMAASVFYPAVLVCLGMAGSFWELAAGLFFFGVAANLTNIS HHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEE VNTQGVGVERLYQCSIMARFHGLWSLAGFFGALLGAAMVDWHISAETHFIAIFLICMIIL ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHH AVFSPSLLPRDARRSSSQGGGMFRSMDAYVLVIGLIAFGSMVSEGTMFDWSGVYFESVVK HHHCCCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHC PGPGLVQMGYVAFMSTMALGRFTADRLVMRFGPVRVLRASGILIASGLLVSVLFPMLWSA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH TLGFLLVGFGTSSIVPLCYSMAGKSRKMIPSMALASVSTIGFLGFLMGPPVIGHIAHASS HHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LRWSFSLIALVGLGTAFIAPFLKKYR HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8349559; 7551036 [H]