Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735990

Identifier: 187735990

GI number: 187735990

Start: 1789023

End: 1789754

Strand: Direct

Name: 187735990

Synonym: Amuc_1499

Alternate gene names: NA

Gene position: 1789023-1789754 (Clockwise)

Preceding gene: 187735987

Following gene: 187735991

Centisome position: 67.15

GC content: 54.51

Gene sequence:

>732_bases
ATGCTGCGCAGGTATTCTTTACTTTCCACTTTTTTTGCGGGAATGGCCGCCGTGTTTTTTTCCTTTGCTGCCTCCTTGGC
CCAGGAGGCTTCTCCGGATGCCGGGCAGCTGCTGAAAAGGGTGCGCCAGGGGGCAACTCTTCAGGAAAACAAGGACATTA
AGGGGCAAATACGCAAACGCAGCGTCAAAATTCCCTTTTCCATGAGTCTGCGCGGCAATCTGATAGCCTTCCAGTACCAG
CTCAATAATGTCTGGAACAGGTTCGACCTGAAATTCAAGGACCGCGGCCAGGAGATCCTTTCCTGGAAGGACGGGAAAGC
CGGTGTTTTGCCGGTTGCCCAGTATGCGGTGCCCATTGCGGGGACGGACGTAACGTACGAAGATCTTTCCATGCGCTACC
TGTACTGGCCCCAGGCAAAAATTGTCCGGGATGATGCGGCGAGCACCGTCAAGGGGCGGGATTGCTGGATTGTCCAGATA
CCGAATCCTAATTCCGGGGTGGGGCAATATGCCTGGGTGCGCGTCTGGATTGATAAGGAGAACGGCGCCATGTGGCAGGT
GGATGGCATTGACCGCCGCGGGGAGCTGGCTAAAAGGTTCATGATTGATTCCGTGATGAAATTGAAGGACGGATCCTGGT
TTTTCAAACGGATGAAGGTGGAGGTCCGGGATCCTTCCAATCCGCGCAGAACGGTCTCCGTCAGCTACATAGATATGGAC
AGCCCAGAATAG

Upstream 100 bases:

>100_bases
ATTACCTAGTCGAGCAAAATTTGGTGTAAAATGTCACGGACGCCGCCCGGTGACTGAGAAAAGGTTTTTTTCCGCCTTTC
CGGAGTGATATGAGCAATTC

Downstream 100 bases:

>100_bases
CCTTCCGGTTCCCGTTCCATTCCCCGCGGAGCTTTCGGATTATTCTTTCCGGGGCATGGGGGCGGATTCCTTTTCATGCC
GCACAGATGGATGATTTAGG

Product: sigma E regulatory protein, MucB/RseB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MLRRYSLLSTFFAGMAAVFFSFAASLAQEASPDAGQLLKRVRQGATLQENKDIKGQIRKRSVKIPFSMSLRGNLIAFQYQ
LNNVWNRFDLKFKDRGQEILSWKDGKAGVLPVAQYAVPIAGTDVTYEDLSMRYLYWPQAKIVRDDAASTVKGRDCWIVQI
PNPNSGVGQYAWVRVWIDKENGAMWQVDGIDRRGELAKRFMIDSVMKLKDGSWFFKRMKVEVRDPSNPRRTVSVSYIDMD
SPE

Sequences:

>Translated_243_residues
MLRRYSLLSTFFAGMAAVFFSFAASLAQEASPDAGQLLKRVRQGATLQENKDIKGQIRKRSVKIPFSMSLRGNLIAFQYQ
LNNVWNRFDLKFKDRGQEILSWKDGKAGVLPVAQYAVPIAGTDVTYEDLSMRYLYWPQAKIVRDDAASTVKGRDCWIVQI
PNPNSGVGQYAWVRVWIDKENGAMWQVDGIDRRGELAKRFMIDSVMKLKDGSWFFKRMKVEVRDPSNPRRTVSVSYIDMD
SPE
>Mature_243_residues
MLRRYSLLSTFFAGMAAVFFSFAASLAQEASPDAGQLLKRVRQGATLQENKDIKGQIRKRSVKIPFSMSLRGNLIAFQYQ
LNNVWNRFDLKFKDRGQEILSWKDGKAGVLPVAQYAVPIAGTDVTYEDLSMRYLYWPQAKIVRDDAASTVKGRDCWIVQI
PNPNSGVGQYAWVRVWIDKENGAMWQVDGIDRRGELAKRFMIDSVMKLKDGSWFFKRMKVEVRDPSNPRRTVSVSYIDMD
SPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27820; Mature: 27820

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRRYSLLSTFFAGMAAVFFSFAASLAQEASPDAGQLLKRVRQGATLQENKDIKGQIRKR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHEEECC
SVKIPFSMSLRGNLIAFQYQLNNVWNRFDLKFKDRGQEILSWKDGKAGVLPVAQYAVPIA
EEECCEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEHHHEEEEEC
GTDVTYEDLSMRYLYWPQAKIVRDDAASTVKGRDCWIVQIPNPNSGVGQYAWVRVWIDKE
CCCCCHHHCEEEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECC
NGAMWQVDGIDRRGELAKRFMIDSVMKLKDGSWFFKRMKVEVRDPSNPRRTVSVSYIDMD
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEECC
SPE
CCC
>Mature Secondary Structure
MLRRYSLLSTFFAGMAAVFFSFAASLAQEASPDAGQLLKRVRQGATLQENKDIKGQIRKR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHEEECC
SVKIPFSMSLRGNLIAFQYQLNNVWNRFDLKFKDRGQEILSWKDGKAGVLPVAQYAVPIA
EEECCEEECCCCCEEEEEEEECCCCCCEEEEECCCCCCEEEECCCCCCCEEHHHEEEEEC
GTDVTYEDLSMRYLYWPQAKIVRDDAASTVKGRDCWIVQIPNPNSGVGQYAWVRVWIDKE
CCCCCHHHCEEEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEEECC
NGAMWQVDGIDRRGELAKRFMIDSVMKLKDGSWFFKRMKVEVRDPSNPRRTVSVSYIDMD
CCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCEEEEEEEEECC
SPE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA