Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is aroD [H]

Identifier: 187735986

GI number: 187735986

Start: 1784973

End: 1785680

Strand: Reverse

Name: aroD [H]

Synonym: Amuc_1495

Alternate gene names: 187735986

Gene position: 1785680-1784973 (Counterclockwise)

Preceding gene: 187735988

Following gene: 187735985

Centisome position: 67.03

GC content: 58.33

Gene sequence:

>708_bases
ATGCAGCAGATTGTACGTGAACATCAGGCCTATCCGCCGAAAATCGTTGCGTCCGTTACCTCGTGGGAGCTATGGAAAAC
GCTGAAAGGAAAAGATTTAACAGACCAGTGCGATCTAGTAGAACTGCGCGTGGATGCCCTTCCCCCGGAACTCACGACTG
AACAGGTTATGGAGTTCCGGCCGGAGATGCCCCTGCTGGTCACCGTGCGCTGCCATGAGGAAGGAGGGCTGCGCCGCATC
CCGGAAGAAGAGCGCTTTGCCCTGCTCCGGGCCTATATGCCGTATGCCGCCGCCATGGACATTGAAATCAAGGCCATGCG
CCACGCCAGGGAACTGGTTATGGAAGCGCGGGAGCGGGACGTCATCATCATCGGCTCCACCCATGATTTCCAAATCACTC
CGGGTGTGGATTACCTGCGCGAACAGGAAAAAAAGGCGCGCTCCTACAAGGCGGATATCGTCAAATTTGCATTCACGCCC
TGCCTGGCCTCGGACATCCAGACAGGAGTACAGCTTTTCACCAAGCCCAAGGGGCCGATCGCCGTCATGGGAATGGGGCC
CATGGGACCCGTCTCCCGCCTGCTTTACTCTCAACTGGGTTCCTGCCTGGTATATGGCTACCTGGGAGAAGAGGAAACGG
CCCCCGGGCAATGGCACGTCTCACTCATTAAGGAAACCCTCCGCCGCCTCGGCCCCATCCTCCGCTGA

Upstream 100 bases:

>100_bases
AGGGGAAAAGGCAGGCGAACTGACATACTCGGCCCCAAAATGAAGTGGAACTCATCAATAGAAGATTGACCTTCCTTCCT
TTGCTGGGATAGTAGGATGT

Downstream 100 bases:

>100_bases
TTACGGAGCCTTCCCTCACATGAATATCATTACTTCCGCCTTTCTGGCGGCACGCCCCAAGACGCTCACCGCCTCCCTGA
TTCCGGTATGGGCAGGCTGC

Product: 3-dehydroquinate dehydratase

Products: NA

Alternate protein names: 3-dehydroquinase; Type I DHQase [H]

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MQQIVREHQAYPPKIVASVTSWELWKTLKGKDLTDQCDLVELRVDALPPELTTEQVMEFRPEMPLLVTVRCHEEGGLRRI
PEEERFALLRAYMPYAAAMDIEIKAMRHARELVMEARERDVIIIGSTHDFQITPGVDYLREQEKKARSYKADIVKFAFTP
CLASDIQTGVQLFTKPKGPIAVMGMGPMGPVSRLLYSQLGSCLVYGYLGEEETAPGQWHVSLIKETLRRLGPILR

Sequences:

>Translated_235_residues
MQQIVREHQAYPPKIVASVTSWELWKTLKGKDLTDQCDLVELRVDALPPELTTEQVMEFRPEMPLLVTVRCHEEGGLRRI
PEEERFALLRAYMPYAAAMDIEIKAMRHARELVMEARERDVIIIGSTHDFQITPGVDYLREQEKKARSYKADIVKFAFTP
CLASDIQTGVQLFTKPKGPIAVMGMGPMGPVSRLLYSQLGSCLVYGYLGEEETAPGQWHVSLIKETLRRLGPILR
>Mature_235_residues
MQQIVREHQAYPPKIVASVTSWELWKTLKGKDLTDQCDLVELRVDALPPELTTEQVMEFRPEMPLLVTVRCHEEGGLRRI
PEEERFALLRAYMPYAAAMDIEIKAMRHARELVMEARERDVIIIGSTHDFQITPGVDYLREQEKKARSYKADIVKFAFTP
CLASDIQTGVQLFTKPKGPIAVMGMGPMGPVSRLLYSQLGSCLVYGYLGEEETAPGQWHVSLIKETLRRLGPILR

Specific function: Aromatic amino acids biosynthesis; shikimate pathway; third step. [C]

COG id: COG0710

COG function: function code E; 3-dehydroquinate dehydratase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I 3-dehydroquinase family [H]

Homologues:

Organism=Escherichia coli, GI1787984, Length=236, Percent_Identity=30.9322033898305, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018508
- InterPro:   IPR013785
- InterPro:   IPR001381 [H]

Pfam domain/function: PF01487 DHquinase_I [H]

EC number: =4.2.1.10 [H]

Molecular weight: Translated: 26741; Mature: 26741

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQIVREHQAYPPKIVASVTSWELWKTLKGKDLTDQCDLVELRVDALPPELTTEQVMEFR
CHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHC
PEMPLLVTVRCHEEGGLRRIPEEERFALLRAYMPYAAAMDIEIKAMRHARELVMEARERD
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCC
VIIIGSTHDFQITPGVDYLREQEKKARSYKADIVKFAFTPCLASDIQTGVQLFTKPKGPI
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVMGMGPMGPVSRLLYSQLGSCLVYGYLGEEETAPGQWHVSLIKETLRRLGPILR
EEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQQIVREHQAYPPKIVASVTSWELWKTLKGKDLTDQCDLVELRVDALPPELTTEQVMEFR
CHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHC
PEMPLLVTVRCHEEGGLRRIPEEERFALLRAYMPYAAAMDIEIKAMRHARELVMEARERD
CCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHCCC
VIIIGSTHDFQITPGVDYLREQEKKARSYKADIVKFAFTPCLASDIQTGVQLFTKPKGPI
EEEEECCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
AVMGMGPMGPVSRLLYSQLGSCLVYGYLGEEETAPGQWHVSLIKETLRRLGPILR
EEEECCCCCHHHHHHHHHHHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA