Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is menA [H]
Identifier: 187735985
GI number: 187735985
Start: 1784027
End: 1784953
Strand: Reverse
Name: menA [H]
Synonym: Amuc_1494
Alternate gene names: 187735985
Gene position: 1784953-1784027 (Counterclockwise)
Preceding gene: 187735986
Following gene: 187735984
Centisome position: 67.0
GC content: 59.98
Gene sequence:
>927_bases ATGAATATCATTACTTCCGCCTTTCTGGCGGCACGCCCCAAGACGCTCACCGCCTCCCTGATTCCGGTATGGGCAGGCTG CATGGTGGTGCAGAAACTGACCGGCAGCTGGAATGCGTCCCTGGCCCTCCTGACACTGACTTCCTGCCTGTGCCTCCAGA TTGCCTGCAATTTTTTCAATGACGCCATTGACCATGCCAAGCACGCCGATACGGAACGGCGAACCGGGCCCGTGCGCATG ACGGCCAGCGGAGCCCTCTCCCACAGAACAGTCATGCTCATCGGCCTCTTCTTCCTGCTGGGAGCGTGCCTTCTGGCCTT TCCCCTTATCGAACTGCGCGGCTGGCCCATCCTCGCCATCGGCATCCCGTCCCTCTACTTCACCTATGGCTATACGGGAG GGCCGTGGCCGCTGGCCTACAAGGGCCTGGGGGAAATATTCGTCATCCTCTTCTTCGGACTGGTTGCCGTACTGGGAACC ATTCTGGTGCAGATAGGCACGGCGCCCGTCGTACCCGGCACGCTGGTGGAATCGCTTGCGGTGTACAATGCCGGCATCGT AACAGGCATTCAATGCGGCCTCCTGTGCGCCGTCATGATATCCGTCAACAATATCCGCGACAGAAAGGAAGACCTCACTA CGGGCAAGCGCACGCTGGCCGTGCGGCTGGGGGAAGGAAAGGCGCGCGCCATGGCCCAGTCTTTCATCCTGGCTGCCTAC ATCACGCTGCCCACATCCAGCCGGGCCCTTCACCTGAACCTGTCCCATACGTGGTGGATGTGGATACCCTCCATCCTCTT CGGCGGGTATCTGATGCTCCTAATCCGCAAAACGCCCGCGGACAGCCGCATGAACAGGGTACTGGCACTCTCCTCCCTCC ATTTGCTCCTGTATCTGGCTACCTACACAATTCTTCCCACACGCTGA
Upstream 100 bases:
>100_bases GAAGAGGAAACGGCCCCCGGGCAATGGCACGTCTCACTCATTAAGGAAACCCTCCGCCGCCTCGGCCCCATCCTCCGCTG ATTACGGAGCCTTCCCTCAC
Downstream 100 bases:
>100_bases AAAACGCTTAACCCCGCCAGCGTAGTTAACTACGTTCATCATGAATCCGCTTCCATTCATTCCCGCTTTTCTTATTCTCC CTGTCCTTTTCTCCTGCACC
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MNIITSAFLAARPKTLTASLIPVWAGCMVVQKLTGSWNASLALLTLTSCLCLQIACNFFNDAIDHAKHADTERRTGPVRM TASGALSHRTVMLIGLFFLLGACLLAFPLIELRGWPILAIGIPSLYFTYGYTGGPWPLAYKGLGEIFVILFFGLVAVLGT ILVQIGTAPVVPGTLVESLAVYNAGIVTGIQCGLLCAVMISVNNIRDRKEDLTTGKRTLAVRLGEGKARAMAQSFILAAY ITLPTSSRALHLNLSHTWWMWIPSILFGGYLMLLIRKTPADSRMNRVLALSSLHLLLYLATYTILPTR
Sequences:
>Translated_308_residues MNIITSAFLAARPKTLTASLIPVWAGCMVVQKLTGSWNASLALLTLTSCLCLQIACNFFNDAIDHAKHADTERRTGPVRM TASGALSHRTVMLIGLFFLLGACLLAFPLIELRGWPILAIGIPSLYFTYGYTGGPWPLAYKGLGEIFVILFFGLVAVLGT ILVQIGTAPVVPGTLVESLAVYNAGIVTGIQCGLLCAVMISVNNIRDRKEDLTTGKRTLAVRLGEGKARAMAQSFILAAY ITLPTSSRALHLNLSHTWWMWIPSILFGGYLMLLIRKTPADSRMNRVLALSSLHLLLYLATYTILPTR >Mature_308_residues MNIITSAFLAARPKTLTASLIPVWAGCMVVQKLTGSWNASLALLTLTSCLCLQIACNFFNDAIDHAKHADTERRTGPVRM TASGALSHRTVMLIGLFFLLGACLLAFPLIELRGWPILAIGIPSLYFTYGYTGGPWPLAYKGLGEIFVILFFGLVAVLGT ILVQIGTAPVVPGTLVESLAVYNAGIVTGIQCGLLCAVMISVNNIRDRKEDLTTGKRTLAVRLGEGKARAMAQSFILAAY ITLPTSSRALHLNLSHTWWMWIPSILFGGYLMLLIRKTPADSRMNRVLALSSLHLLLYLATYTILPTR
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Escherichia coli, GI1790365, Length=267, Percent_Identity=31.4606741573034, Blast_Score=98, Evalue=6e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33467; Mature: 33467
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIITSAFLAARPKTLTASLIPVWAGCMVVQKLTGSWNASLALLTLTSCLCLQIACNFFN CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH DAIDHAKHADTERRTGPVRMTASGALSHRTVMLIGLFFLLGACLLAFPLIELRGWPILAI HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GIPSLYFTYGYTGGPWPLAYKGLGEIFVILFFGLVAVLGTILVQIGTAPVVPGTLVESLA ECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VYNAGIVTGIQCGLLCAVMISVNNIRDRKEDLTTGKRTLAVRLGEGKARAMAQSFILAAY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH ITLPTSSRALHLNLSHTWWMWIPSILFGGYLMLLIRKTPADSRMNRVLALSSLHLLLYLA EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TYTILPTR HHHHCCCC >Mature Secondary Structure MNIITSAFLAARPKTLTASLIPVWAGCMVVQKLTGSWNASLALLTLTSCLCLQIACNFFN CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH DAIDHAKHADTERRTGPVRMTASGALSHRTVMLIGLFFLLGACLLAFPLIELRGWPILAI HHHHHHHCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE GIPSLYFTYGYTGGPWPLAYKGLGEIFVILFFGLVAVLGTILVQIGTAPVVPGTLVESLA ECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH VYNAGIVTGIQCGLLCAVMISVNNIRDRKEDLTTGKRTLAVRLGEGKARAMAQSFILAAY HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHHH ITLPTSSRALHLNLSHTWWMWIPSILFGGYLMLLIRKTPADSRMNRVLALSSLHLLLYLA EECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TYTILPTR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]