Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735984

Identifier: 187735984

GI number: 187735984

Start: 1783555

End: 1783986

Strand: Reverse

Name: 187735984

Synonym: Amuc_1493

Alternate gene names: NA

Gene position: 1783986-1783555 (Counterclockwise)

Preceding gene: 187735985

Following gene: 187735983

Centisome position: 66.96

GC content: 55.09

Gene sequence:

>432_bases
ATGAATCCGCTTCCATTCATTCCCGCTTTTCTTATTCTCCCTGTCCTTTTCTCCTGCACCCAAAAAAGCAATCTGGAAAT
CGCCACCGGCAAAGTGACGACCATCAAGCTGGGCAACGTGGTCCGCATCAAGGAAATCAACGTCCTTACCTCCACGGACG
ATGGCACCTTTGCCAACATGGCCGGAACGGCGGCGGAGGCCATGACTCCCGGCATCATCGGCATGGGGACCTCAAAACTG
GCTTCCGCCACAGGCTCCATCGTGGACGGCAGGGTGGAAGCCGTCAAAATGATCCGCGTGCGCGTCAAGCTCAAGGATAC
GAACGAACTTGTGGAAGTACAGCAGGAAGTAACGCCAAACTTCACCCTGAAAATAGGCCAGGAAGTCGTCATTACCCAGG
GAAGCACGCCCGGCAATGTCTGGCCCGATTAA

Upstream 100 bases:

>100_bases
CTCTCCTCCCTCCATTTGCTCCTGTATCTGGCTACCTACACAATTCTTCCCACACGCTGAAAAACGCTTAACCCCGCCAG
CGTAGTTAACTACGTTCATC

Downstream 100 bases:

>100_bases
CGGATATATGAACCACGCCGCGGCACCAGCCCCGCCGCCCCGGGGCCTCCTGATTAAGAGCACGGGCCTCCTGACGGCCG
TCTCCCCCCTCTGCACATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MNPLPFIPAFLILPVLFSCTQKSNLEIATGKVTTIKLGNVVRIKEINVLTSTDDGTFANMAGTAAEAMTPGIIGMGTSKL
ASATGSIVDGRVEAVKMIRVRVKLKDTNELVEVQQEVTPNFTLKIGQEVVITQGSTPGNVWPD

Sequences:

>Translated_143_residues
MNPLPFIPAFLILPVLFSCTQKSNLEIATGKVTTIKLGNVVRIKEINVLTSTDDGTFANMAGTAAEAMTPGIIGMGTSKL
ASATGSIVDGRVEAVKMIRVRVKLKDTNELVEVQQEVTPNFTLKIGQEVVITQGSTPGNVWPD
>Mature_143_residues
MNPLPFIPAFLILPVLFSCTQKSNLEIATGKVTTIKLGNVVRIKEINVLTSTDDGTFANMAGTAAEAMTPGIIGMGTSKL
ASATGSIVDGRVEAVKMIRVRVKLKDTNELVEVQQEVTPNFTLKIGQEVVITQGSTPGNVWPD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15228; Mature: 15228

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPLPFIPAFLILPVLFSCTQKSNLEIATGKVTTIKLGNVVRIKEINVLTSTDDGTFANM
CCCCCCHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCEEEEEEEEEEECCCCCCEECC
AGTAAEAMTPGIIGMGTSKLASATGSIVDGRVEAVKMIRVRVKLKDTNELVEVQQEVTPN
CCCHHHHCCCCEEECCCHHHHHCCCCCCCCHHHHEEEEEEEEEECCCHHHHHHHHHCCCC
FTLKIGQEVVITQGSTPGNVWPD
EEEEECCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MNPLPFIPAFLILPVLFSCTQKSNLEIATGKVTTIKLGNVVRIKEINVLTSTDDGTFANM
CCCCCCHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCEEEEEEEEEEECCCCCCEECC
AGTAAEAMTPGIIGMGTSKLASATGSIVDGRVEAVKMIRVRVKLKDTNELVEVQQEVTPN
CCCHHHHCCCCEEECCCHHHHHCCCCCCCCHHHHEEEEEEEEEECCCHHHHHHHHHCCCC
FTLKIGQEVVITQGSTPGNVWPD
EEEEECCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA