Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is lepB2 [H]

Identifier: 187735956

GI number: 187735956

Start: 1756581

End: 1757876

Strand: Reverse

Name: lepB2 [H]

Synonym: Amuc_1465

Alternate gene names: 187735956

Gene position: 1757876-1756581 (Counterclockwise)

Preceding gene: 187735957

Following gene: 187735955

Centisome position: 65.98

GC content: 57.72

Gene sequence:

>1296_bases
ATGCCGTACTTCATGAATAGCCCGCACAAGTCCATCCTAGCTGCCCTTTACGATTGCTTTCCGGCTGCAAACGCCGTTCT
GGTGTTTCTTCTGGATCATCCTCTGGCCTGGTTCACGCCCAAATGGCGCCGGAAAGGACGTATGGCCCTGAAAGCAGTGC
GCCGCTACATCAACTACAATCGCGATCTTCTGCCTCCCGAACGCCTGGCGGAGTTTGAAGAAAGCCGCAACCTGCTGAAA
ACGGCCCTTTACCGGGGTGACAGGCAGCAGGCGGAAACCATTACCGCCAAACTGGAATCCACGCTGGAATCCATCCCCGG
AGCGATTCCTTCCGCCCTGGCGGAAAACGTGGAAGTTCTGTTCGTGATTCTGGCCATTTTCCTGGGTTTGCGCTGTTATG
TAGTCCAGCCCTTCCGCATCCCGACCGGTTCCATGCAGCCCTCCCTGAACGGAATCCGCGCCCTTCCCCAGGAAGGGGAT
CCCACCCTGATGCAGAAAATCGGGGACATGATTCTGTACGGCGGCTCCTATGTGCACGAAACGGCCTCCAAGGAAAAGAA
AATCGTCCGTTTCGAACCTGCCACCAAGTATCTTCTGCTCACGGTGACCAACGTGATTTTCGATGACGGCTCCAAGCTGG
AAATCCCGGCAGCGGAAGCGGAAACGCGCCGCTACTTCCTCAATCAGGAACCGCGCTTTGAAGCCGAACGGCACACCCCG
TTCAGAAGCTACCTGCCCGGAGACACAATCGTCAATGCCCGTTTTGACGCCGGGGACCTAATCGTGGTGAATAAAATGGC
CTACCACTTCCGCAAGCCGGAACGAGGGGAAGTCTTCGTCTTTGATACACGCGGCATCGAAGGCATCGCCAATAAGGGAA
GCAGCACCGGCCAGGAAGGAGGAACCCACTACGTCAAACGCCTCTGCGGCATTCCGGGAGATACCCTCTCCATTCAGGAC
TCCCAGCTAATCGTCAATGGGAAACCAGCCACGGAATGGACTATCCAGAGGGTTGCTTCCGGCAAGCCCCCCTACCAGCC
CTGCGGCTACGTGGCCCTTCCCGCCCCCCTGAGCCTGCTGGACGGCAGAGCTTACATCACGGAAGGGGGAACCGTGCATC
TGTCCAACGACAGCAAACGCCCCTATCTGCGTGAATACGTGGCACTGGGGGACAATTCCACCCGCGAAAATTCCTTTGAT
TCCCGGTACTGGGGCCCCGTCCGCCAGTACAACATCGTAGGCCCCGCCAGCTTCTGCCTGTGGCCCTTTACTTCCCACTG
GGGCCTTATTCCATGA

Upstream 100 bases:

>100_bases
AAATCCGCCCTGGACCCAAAAAATTTGCTGAATCCTGGAAAAATGGGGCTTCCGTAACGTAAAATAAACTTCCATGACGC
CTCCGGACGGGGCATCATGA

Downstream 100 bases:

>100_bases
TTTTTATCCTTTTCGCAGGCACGTTTTTTCCGTCAAGACATGACTCAAGCCCAAACCATCACCAGCAAGGCCAAGTCCAA
CCTGGCCTTTGCCCTCATTG

Product: signal peptidase I

Products: NA

Alternate protein names: SPase I-2; Leader peptidase I-2 [H]

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLK
TALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGD
PTLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP
FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQD
SQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFD
SRYWGPVRQYNIVGPASFCLWPFTSHWGLIP

Sequences:

>Translated_431_residues
MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLK
TALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGD
PTLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP
FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQD
SQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFD
SRYWGPVRQYNIVGPASFCLWPFTSHWGLIP
>Mature_430_residues
PYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLKT
ALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDP
TLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTPF
RSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQDS
QLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDS
RYWGPVRQYNIVGPASFCLWPFTSHWGLIP

Specific function: Unknown

COG id: COG0681

COG function: function code U; Signal peptidase I

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S26 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000223
- InterPro:   IPR019758
- InterPro:   IPR019757
- InterPro:   IPR019756
- InterPro:   IPR019759
- InterPro:   IPR015927
- InterPro:   IPR011056 [H]

Pfam domain/function: PF00717 Peptidase_S24 [H]

EC number: =3.4.21.89 [H]

Molecular weight: Translated: 48441; Mature: 48310

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYN
CCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC
RDLLPPERLAEFEESRNLLKTALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDPTLMQKIGDMILYGGSYVHE
HHHHHHHHCCEEEEEECEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCHHHH
TASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP
HHHCCCCEEEECCCCCEEHEEEHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHCCC
FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEG
HHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCC
GTHYVKRLCGIPGDTLSIQDSQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLL
HHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHH
DGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDSRYWGPVRQYNIVGPASFCL
CCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHEE
WPFTSHWGLIP
CCCCCCCCCCC
>Mature Secondary Structure 
PYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYN
CCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC
RDLLPPERLAEFEESRNLLKTALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVL
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
FVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDPTLMQKIGDMILYGGSYVHE
HHHHHHHHCCEEEEEECEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCHHHH
TASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP
HHHCCCCEEEECCCCCEEHEEEHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHCCC
FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEG
HHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCC
GTHYVKRLCGIPGDTLSIQDSQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLL
HHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHH
DGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDSRYWGPVRQYNIVGPASFCL
CCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHEE
WPFTSHWGLIP
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]