Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is lepB2 [H]
Identifier: 187735956
GI number: 187735956
Start: 1756581
End: 1757876
Strand: Reverse
Name: lepB2 [H]
Synonym: Amuc_1465
Alternate gene names: 187735956
Gene position: 1757876-1756581 (Counterclockwise)
Preceding gene: 187735957
Following gene: 187735955
Centisome position: 65.98
GC content: 57.72
Gene sequence:
>1296_bases ATGCCGTACTTCATGAATAGCCCGCACAAGTCCATCCTAGCTGCCCTTTACGATTGCTTTCCGGCTGCAAACGCCGTTCT GGTGTTTCTTCTGGATCATCCTCTGGCCTGGTTCACGCCCAAATGGCGCCGGAAAGGACGTATGGCCCTGAAAGCAGTGC GCCGCTACATCAACTACAATCGCGATCTTCTGCCTCCCGAACGCCTGGCGGAGTTTGAAGAAAGCCGCAACCTGCTGAAA ACGGCCCTTTACCGGGGTGACAGGCAGCAGGCGGAAACCATTACCGCCAAACTGGAATCCACGCTGGAATCCATCCCCGG AGCGATTCCTTCCGCCCTGGCGGAAAACGTGGAAGTTCTGTTCGTGATTCTGGCCATTTTCCTGGGTTTGCGCTGTTATG TAGTCCAGCCCTTCCGCATCCCGACCGGTTCCATGCAGCCCTCCCTGAACGGAATCCGCGCCCTTCCCCAGGAAGGGGAT CCCACCCTGATGCAGAAAATCGGGGACATGATTCTGTACGGCGGCTCCTATGTGCACGAAACGGCCTCCAAGGAAAAGAA AATCGTCCGTTTCGAACCTGCCACCAAGTATCTTCTGCTCACGGTGACCAACGTGATTTTCGATGACGGCTCCAAGCTGG AAATCCCGGCAGCGGAAGCGGAAACGCGCCGCTACTTCCTCAATCAGGAACCGCGCTTTGAAGCCGAACGGCACACCCCG TTCAGAAGCTACCTGCCCGGAGACACAATCGTCAATGCCCGTTTTGACGCCGGGGACCTAATCGTGGTGAATAAAATGGC CTACCACTTCCGCAAGCCGGAACGAGGGGAAGTCTTCGTCTTTGATACACGCGGCATCGAAGGCATCGCCAATAAGGGAA GCAGCACCGGCCAGGAAGGAGGAACCCACTACGTCAAACGCCTCTGCGGCATTCCGGGAGATACCCTCTCCATTCAGGAC TCCCAGCTAATCGTCAATGGGAAACCAGCCACGGAATGGACTATCCAGAGGGTTGCTTCCGGCAAGCCCCCCTACCAGCC CTGCGGCTACGTGGCCCTTCCCGCCCCCCTGAGCCTGCTGGACGGCAGAGCTTACATCACGGAAGGGGGAACCGTGCATC TGTCCAACGACAGCAAACGCCCCTATCTGCGTGAATACGTGGCACTGGGGGACAATTCCACCCGCGAAAATTCCTTTGAT TCCCGGTACTGGGGCCCCGTCCGCCAGTACAACATCGTAGGCCCCGCCAGCTTCTGCCTGTGGCCCTTTACTTCCCACTG GGGCCTTATTCCATGA
Upstream 100 bases:
>100_bases AAATCCGCCCTGGACCCAAAAAATTTGCTGAATCCTGGAAAAATGGGGCTTCCGTAACGTAAAATAAACTTCCATGACGC CTCCGGACGGGGCATCATGA
Downstream 100 bases:
>100_bases TTTTTATCCTTTTCGCAGGCACGTTTTTTCCGTCAAGACATGACTCAAGCCCAAACCATCACCAGCAAGGCCAAGTCCAA CCTGGCCTTTGCCCTCATTG
Product: signal peptidase I
Products: NA
Alternate protein names: SPase I-2; Leader peptidase I-2 [H]
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLK TALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGD PTLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQD SQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFD SRYWGPVRQYNIVGPASFCLWPFTSHWGLIP
Sequences:
>Translated_431_residues MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLK TALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGD PTLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQD SQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFD SRYWGPVRQYNIVGPASFCLWPFTSHWGLIP >Mature_430_residues PYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYNRDLLPPERLAEFEESRNLLKT ALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVLFVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDP TLMQKIGDMILYGGSYVHETASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTPF RSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEGGTHYVKRLCGIPGDTLSIQDS QLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLLDGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDS RYWGPVRQYNIVGPASFCLWPFTSHWGLIP
Specific function: Unknown
COG id: COG0681
COG function: function code U; Signal peptidase I
Gene ontology:
Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S26 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000223 - InterPro: IPR019758 - InterPro: IPR019757 - InterPro: IPR019756 - InterPro: IPR019759 - InterPro: IPR015927 - InterPro: IPR011056 [H]
Pfam domain/function: PF00717 Peptidase_S24 [H]
EC number: =3.4.21.89 [H]
Molecular weight: Translated: 48441; Mature: 48310
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYN CCCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC RDLLPPERLAEFEESRNLLKTALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVL CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDPTLMQKIGDMILYGGSYVHE HHHHHHHHCCEEEEEECEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCHHHH TASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP HHHCCCCEEEECCCCCEEHEEEHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHCCC FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEG HHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCC GTHYVKRLCGIPGDTLSIQDSQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLL HHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHH DGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDSRYWGPVRQYNIVGPASFCL CCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHEE WPFTSHWGLIP CCCCCCCCCCC >Mature Secondary Structure PYFMNSPHKSILAALYDCFPAANAVLVFLLDHPLAWFTPKWRRKGRMALKAVRRYINYN CCCCCCCHHHHHHHHHHHHCCHHHEEEEEECCCHHHCCHHHHHHHHHHHHHHHHHHCCC RDLLPPERLAEFEESRNLLKTALYRGDRQQAETITAKLESTLESIPGAIPSALAENVEVL CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH FVILAIFLGLRCYVVQPFRIPTGSMQPSLNGIRALPQEGDPTLMQKIGDMILYGGSYVHE HHHHHHHHCCEEEEEECEECCCCCCCCCCCHHHCCCCCCCHHHHHHHHHEEEECCCHHHH TASKEKKIVRFEPATKYLLLTVTNVIFDDGSKLEIPAAEAETRRYFLNQEPRFEAERHTP HHHCCCCEEEECCCCCEEHEEEHHHHHCCCCEEECCCCHHHHHHHHCCCCCCCCCHHCCC FRSYLPGDTIVNARFDAGDLIVVNKMAYHFRKPERGEVFVFDTRGIEGIANKGSSTGQEG HHHHCCCCCEEEEEECCCCEEEEEHHHHHCCCCCCCCEEEEECCCCCHHHCCCCCCCCCC GTHYVKRLCGIPGDTLSIQDSQLIVNGKPATEWTIQRVASGKPPYQPCGYVALPAPLSLL HHHHHHHHHCCCCCEEEECCCEEEECCCCCHHHHHHHHHCCCCCCCCCCCEECCCCHHHH DGRAYITEGGTVHLSNDSKRPYLREYVALGDNSTRENSFDSRYWGPVRQYNIVGPASFCL CCCEEEECCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCHHEE WPFTSHWGLIP CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]