Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is 187735940
Identifier: 187735940
GI number: 187735940
Start: 1740272
End: 1740733
Strand: Direct
Name: 187735940
Synonym: Amuc_1449
Alternate gene names: NA
Gene position: 1740272-1740733 (Clockwise)
Preceding gene: 187735939
Following gene: 187735946
Centisome position: 65.32
GC content: 67.32
Gene sequence:
>462_bases ATGGCCCCCGCCGCCGGGATGCTGATGGAGGTGCGGCGCCTTCTGGATGAAGGCGCCTTCCGCGCTTCCCGTGCCCAACG TTTCTGTACCGGTGCGGCGGATTGCTGCCGGTTCCGCCTGACCGGGGAGACGCCGCATGTAACGCTGGGGGAGGCATGGG TGGCCTGGAAGGCGTGGCGTGCTTCCGGACGCACCCGGTTGGAGCTGCCTCCGGACGGGAGCTGCCCTTTCTTGAGCGGT CAGGGAAGATGCATGATTTATGAAGGCAGGCCGTTGGCGTGCCGCACTCATTTCTGCGTACCGGCCGGGGGCGCCTTGCC CCGCCGGGAGGTTATTGACCTGATCCATGCGCTGGAAGATATTGACGCAGCGCTGGGCGGCGATGGCGCAGCCCGGCTGC CGGAGGCCGTGGAACGGCTGTCCCGAAAAGGCCCGGCGGATGGAAGGAAGAGGCGGCGATGA
Upstream 100 bases:
>100_bases CCGAGTATGCATACTGGAACCAGGCGAAAGCGGACGGCCTGACCTGTTAACCGTTTCTGTCATGGCGCGTGGCAAATGCC GCCAGGGAAAGGCGGGGGGA
Downstream 100 bases:
>100_bases TGATCCGGGGGTGACGGCAGTCAGGCGTCTATTTCCAAGCGGAAGCACATTTTTTCAGGCCATGGGAACATGTTTTCCCT TCGTGTGTCCATGGCTGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAPAAGMLMEVRRLLDEGAFRASRAQRFCTGAADCCRFRLTGETPHVTLGEAWVAWKAWRASGRTRLELPPDGSCPFLSG QGRCMIYEGRPLACRTHFCVPAGGALPRREVIDLIHALEDIDAALGGDGAARLPEAVERLSRKGPADGRKRRR
Sequences:
>Translated_153_residues MAPAAGMLMEVRRLLDEGAFRASRAQRFCTGAADCCRFRLTGETPHVTLGEAWVAWKAWRASGRTRLELPPDGSCPFLSG QGRCMIYEGRPLACRTHFCVPAGGALPRREVIDLIHALEDIDAALGGDGAARLPEAVERLSRKGPADGRKRRR >Mature_152_residues APAAGMLMEVRRLLDEGAFRASRAQRFCTGAADCCRFRLTGETPHVTLGEAWVAWKAWRASGRTRLELPPDGSCPFLSGQ GRCMIYEGRPLACRTHFCVPAGGALPRREVIDLIHALEDIDAALGGDGAARLPEAVERLSRKGPADGRKRRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16714; Mature: 16583
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPAAGMLMEVRRLLDEGAFRASRAQRFCTGAADCCRFRLTGETPHVTLGEAWVAWKAWR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCEEEECHHHHHHHHHH ASGRTRLELPPDGSCPFLSGQGRCMIYEGRPLACRTHFCVPAGGALPRREVIDLIHALED CCCCEEEECCCCCCCCEECCCCCEEEECCCCCEEECEEECCCCCCCCHHHHHHHHHHHHH IDAALGGDGAARLPEAVERLSRKGPADGRKRRR HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure APAAGMLMEVRRLLDEGAFRASRAQRFCTGAADCCRFRLTGETPHVTLGEAWVAWKAWR CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCEEEECHHHHHHHHHH ASGRTRLELPPDGSCPFLSGQGRCMIYEGRPLACRTHFCVPAGGALPRREVIDLIHALED CCCCEEEECCCCCCCCEECCCCCEEEECCCCCEEECEEECCCCCCCCHHHHHHHHHHHHH IDAALGGDGAARLPEAVERLSRKGPADGRKRRR HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA