Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735916
Identifier: 187735916
GI number: 187735916
Start: 1711344
End: 1712327
Strand: Reverse
Name: 187735916
Synonym: Amuc_1425
Alternate gene names: NA
Gene position: 1712327-1711344 (Counterclockwise)
Preceding gene: 187735918
Following gene: 187735915
Centisome position: 64.27
GC content: 62.3
Gene sequence:
>984_bases ATGAGCCGCTATTCTTCATCCTGGACACCTTTACCCGCCCTTCCCGATCCGGAAGGCTTCGCCGGCATGTACGCAGGGAC CTGCGGAGAAATAATGATTTGTGCAGGAGGTACCAATTTCCCGGAAAAGCCCATGCTTGAAGGAGGAGCCAAAACGTGGA CGGACCGTATCTTTACGCTCTCTCCGGGGGAAAACGAATGGAAAGAGGCCGGAACATTGCCCGTGCCTTATGCATACGGC GCCTCCGCCGGCATCAGGGAAGGCCTGCTGTGCATCGGCGGCTGCGGCAAGGAAGGGCACCGGAAAGACGTTTACCTGCT GAACCTCGCGGAGGGAACTGTCACCACGCATCCTTTCCCTTCCCTCCCTATCGCCCTGGCATATACGGCGGCTGCCGTCC TGGACGGGAAAGTCTATCTTACAGGAGGGTGCGAACGCCCCGGCGAGCAGGACTGCACCAACCGGGTCTTCATGCTGGAC ACACGCCGGACGGAACAGGGATGGCTGGAACAGGCCCCGCTGCCGGGCCGCGGCCGCTTCCTGCATCAGATGGCCGCAAC AGACGGAGCCCTGTACGTGCTCGGCGGCATCGGCCTGCGGGAACAGGACGGCCAACAGGTCCGGGAACTGCTGAAGGAAG CCTGGAGCTATACTCCGGAACACGGATGGACGCGCCTGCCGGACATGCCTTACGCCATCGCCGCAGCCCCCACCCCGGCC CCGGTTTCCGGAAACGGCGTCATTTACCTGCTTGGGGGGGATGACGGCTCCGGAAAAAAATACACTCCCCAAACTAATCC CGGCTTCAATAACCAATCCCTGTGCCTGGACACGGCAGACATGACATGGCACGACGCAGGCCCCATCGCCGCGCCCAGGG CTGTCCTTCCGTGTTGCGCGTGGCAGGACCGTTTCGCGGCCGTGAACGGAGAGCTCAAACCCGGCAGGCGCTCTCCTGAA GTGTGGAGCATCTCCCTCCCCTGA
Upstream 100 bases:
>100_bases GCGCAAGGAAAGGAATTTATTCAAAAAAATAGGACCAGAGGTTAATACTGGCGCAGCCGCCGGTTTTTAGCTAGTATATG GCGAGTCATTTACACGTATT
Downstream 100 bases:
>100_bases TTTGACCGGAATCCAATTAAACCTCTCAACATATGCACATGACACGCTCCCTTACCCGAATTTCCAAGGCTTGCGGCTCC GCTCTGGCAGCCCTGCTTCT
Product: Kelch repeat-containing protein
Products: NA
Alternate protein names: Cyclically-Permuted Mutarotase Family Protein; Kelch Repeat Protein; SSS Sodium Solute Transporter Superfamily; Sialate O-Acetylesterase; SodiumSolute Symporter; Lipoprotein
Number of amino acids: Translated: 327; Mature: 326
Protein sequence:
>327_residues MSRYSSSWTPLPALPDPEGFAGMYAGTCGEIMICAGGTNFPEKPMLEGGAKTWTDRIFTLSPGENEWKEAGTLPVPYAYG ASAGIREGLLCIGGCGKEGHRKDVYLLNLAEGTVTTHPFPSLPIALAYTAAAVLDGKVYLTGGCERPGEQDCTNRVFMLD TRRTEQGWLEQAPLPGRGRFLHQMAATDGALYVLGGIGLREQDGQQVRELLKEAWSYTPEHGWTRLPDMPYAIAAAPTPA PVSGNGVIYLLGGDDGSGKKYTPQTNPGFNNQSLCLDTADMTWHDAGPIAAPRAVLPCCAWQDRFAAVNGELKPGRRSPE VWSISLP
Sequences:
>Translated_327_residues MSRYSSSWTPLPALPDPEGFAGMYAGTCGEIMICAGGTNFPEKPMLEGGAKTWTDRIFTLSPGENEWKEAGTLPVPYAYG ASAGIREGLLCIGGCGKEGHRKDVYLLNLAEGTVTTHPFPSLPIALAYTAAAVLDGKVYLTGGCERPGEQDCTNRVFMLD TRRTEQGWLEQAPLPGRGRFLHQMAATDGALYVLGGIGLREQDGQQVRELLKEAWSYTPEHGWTRLPDMPYAIAAAPTPA PVSGNGVIYLLGGDDGSGKKYTPQTNPGFNNQSLCLDTADMTWHDAGPIAAPRAVLPCCAWQDRFAAVNGELKPGRRSPE VWSISLP >Mature_326_residues SRYSSSWTPLPALPDPEGFAGMYAGTCGEIMICAGGTNFPEKPMLEGGAKTWTDRIFTLSPGENEWKEAGTLPVPYAYGA SAGIREGLLCIGGCGKEGHRKDVYLLNLAEGTVTTHPFPSLPIALAYTAAAVLDGKVYLTGGCERPGEQDCTNRVFMLDT RRTEQGWLEQAPLPGRGRFLHQMAATDGALYVLGGIGLREQDGQQVRELLKEAWSYTPEHGWTRLPDMPYAIAAAPTPAP VSGNGVIYLLGGDDGSGKKYTPQTNPGFNNQSLCLDTADMTWHDAGPIAAPRAVLPCCAWQDRFAAVNGELKPGRRSPEV WSISLP
Specific function: Unknown
COG id: COG3055
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35134; Mature: 35003
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRYSSSWTPLPALPDPEGFAGMYAGTCGEIMICAGGTNFPEKPMLEGGAKTWTDRIFTL CCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE SPGENEWKEAGTLPVPYAYGASAGIREGLLCIGGCGKEGHRKDVYLLNLAEGTVTTHPFP CCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEECCCCC SLPIALAYTAAAVLDGKVYLTGGCERPGEQDCTNRVFMLDTRRTEQGWLEQAPLPGRGRF CCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCCCHHHCCCCCCCCHH LHQMAATDGALYVLGGIGLREQDGQQVRELLKEAWSYTPEHGWTRLPDMPYAIAAAPTPA HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC PVSGNGVIYLLGGDDGSGKKYTPQTNPGFNNQSLCLDTADMTWHDAGPIAAPRAVLPCCA CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCC WQDRFAAVNGELKPGRRSPEVWSISLP CCCCEEEECCCCCCCCCCCCEEEEECC >Mature Secondary Structure SRYSSSWTPLPALPDPEGFAGMYAGTCGEIMICAGGTNFPEKPMLEGGAKTWTDRIFTL CCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEEE SPGENEWKEAGTLPVPYAYGASAGIREGLLCIGGCGKEGHRKDVYLLNLAEGTVTTHPFP CCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCEECCCCC SLPIALAYTAAAVLDGKVYLTGGCERPGEQDCTNRVFMLDTRRTEQGWLEQAPLPGRGRF CCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHCCCEEEEECCCCCCCHHHCCCCCCCCHH LHQMAATDGALYVLGGIGLREQDGQQVRELLKEAWSYTPEHGWTRLPDMPYAIAAAPTPA HHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCC PVSGNGVIYLLGGDDGSGKKYTPQTNPGFNNQSLCLDTADMTWHDAGPIAAPRAVLPCCA CCCCCCEEEEEECCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHCC WQDRFAAVNGELKPGRRSPEVWSISLP CCCCEEEECCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA