Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is exuT [H]
Identifier: 187735915
GI number: 187735915
Start: 1708759
End: 1711311
Strand: Reverse
Name: exuT [H]
Synonym: Amuc_1424
Alternate gene names: 187735915
Gene position: 1711311-1708759 (Counterclockwise)
Preceding gene: 187735916
Following gene: 187735914
Centisome position: 64.24
GC content: 62.91
Gene sequence:
>2553_bases ATGCACATGACACGCTCCCTTACCCGAATTTCCAAGGCTTGCGGCTCCGCTCTGGCAGCCCTGCTTCTCATCGCGGCTCC GGCCGCTGACGCCTCCTTTTCCGTGGATGTCCGGACGTCCGGAACTGTTCCCGACCTTCCGGACCCGGCAGGCCGCGCCG GCATGGTTGCCGGAACCGTCACGGAAGACGACGGCAGCCAGTCCGTCATCGCCGCAGGGGGCGCCAACTTCCCCCAGGCT GCGCCGGGCGCCTCAACTCCGGAGGAACGCGGCCCCAAAACCTACTACCAGGATATTTTCAAGCTTCGCAACGGCCAGTG GAGCAAGGCGGGAACATTGCCCGTCCCGCTGGGTTACGCCGCCTTTGCCAGCGTGGGCAAGGGGCTGGCTGTGGCCGGAG GCCACAATGCTCAGGGCATCCTGAAAGATGCCCTGCTGATTAAAACGGACGGCTCCGTAGAAAAGCTTCCTCCCCTTCCC GTCCCCGTAACGGAAGCCTCCTGCGCCGCCCACGGGAACAAATTGTTCGTCATCGGCGGCAGAGACCGGGAGCAGCCGGA AACCGCACTCAATACCATCTACATGCTGGACACCACGCCGGACACGGATAAAATGAAATGGGTTTCCCTTCCCCCTTTTC CCGGAGAGGGGCGCATTCTCTCCACCGCTGCCGTCTGCGACAGCACCCTGTTCATCATAGGCGGCTGTTCCCTGTCCAGG GATAACTCCGGAGAAACCTCCAGGACGTATCTTTCCGACATGATCGGCTACGACATGACGTCCAAGGACCCTTCCAAATG GGGCTCCTCCGGCAGGCAGCAGCTTGCCGGACCGGGAATGCCCGTAGCCGCCGCCGCGGGTCCCGCCCCGGTGCGGGAAA ACTCCATTCTCCTGATCGGCGGAGACAAGCGCGGCAACTCGCCGGACCCGTCCAGGCCTGTGGCGCAGTCCCGGGATATC CTGGTCTATGACGTCATCGGAAACACATGGACGCGCCAGGGGGAATGGCCCGTGGGCATCGCCACGGTTCCCGCCGTTGT CAGGGGCTCTGAAATCATGACCATCAGCGGGGAAACGGCCCCGGGCGTCCGGACCCCGGCAAACGCCTCCGCCTCCGCAG GTTACCACTTTGAAATGAGCACGGTTGATTACGCCGTTCTCATTCTGACCATCATCGTCCTGGCGATCATCATCGTCTCC GCCGTGCGCAACGGCGTTAAAAATGTTGCCTCCGTCACGGACCCGAACACCAAACCGGGCCTGTGGGCCTGGGTAGCCGT CATTGTCCTGTGGTTTGTGGTCATGCTGAACTATTTTGACCGCCAGCTCCTTTCCGCCCTGCATGAACCCATCGTACGGG ACATTCCGCAGACGGAAGCCCAGTTCGGCATGGTCACCTCCGTTTTCCTGCTGATTTACGCCCTGCTCAGCCCGGTGGGC GGCTTTCTGGCGGACCGCTACAGCCGCCGGCTGATGATCCTCTGCTCTCTCGTCGTCTGGTCCGTGGTCACATGGTGGAC CGGCCATGCGGAAGATTACACTTCCCTGCTCATTGCGCGCGGAGCAATGGGCATCAGCGAGGCATTCTACATCCCCGCCG CCCTGGCCCTGATTACGGACTACCACCGCGGCAGCACGCGCTCCATCGCTACGGGCCTGCACATGAGCGGCATCTATGTA GGCATGGCCGTCGCCGGCTTCGGTGCCACCATGGCTTCATGGACGGGATGGCGCATGACGTTCGCCCTGTTCGGCCTCAT CGGCGTGGCGTACGCCGTCATCCTCATCCTGTTCCTGAAAGATCCGGCCAAGGCCCCGGCGGATACGGCCCAGGCAAAAA AACCGTCCGTACCGGAGGAAAAAACGGTGCTGCTCAATGTGGACAATGACGAACAGGCCATCAAGGAACCCTCTTCCAAA CTTTCCACCGGAGCCGTCCTTTCCAGCCTGCTGAGCGGACGCCCCATGTGGATGCTGCTGGCCGTAGTGGCCTTTGCCGG AGCCGGAAACTGGTTCCTTCTCACCTGGTATCCCACCCTGCTTCAGGACAAATACCAGCTCTCCTCCGCGGAAGCGGGCC CCGCCGCCACCCTGTGGAGCTCCGTGGCCAAATACGTCGCCGTGCTGGGAGGCGCCATCCTGGCGGATATGTGGTACAGG CGCAACGCCCGCGCCCGCGCCCTGGTGCCGGGCATCACCTTCACCATATCCGGCCCATTAGTGGTTCTGGCGCTGCTGCC CGGCATCTTCGGCTGGGACATCACCGTTCCGCTCGTGCTCATGCTGGGTCTGGTCGCCACGCAGGGGCTGGCGCAGGGAT CACTGGACGCCACCCTCATGCCTGTGCTACGCTCCCATATCGACGAGCGTTATTCCGCAACCGGCTATGGCCTCCTCAAC CTCACATCCGCCGGCGTGGGCGCCCTCATCTCCTTCTTTGGGGGATGGTTCAAGGATCAGGGCGTTCCGCTGACCACCAC CCTGGCGGCGGCAGGATGCCTGATGCTGTTCTGCGGGCTGCTGCTCCTGATGCTGCCGCGTCCCAAACATTAA
Upstream 100 bases:
>100_bases CGGCCGTGAACGGAGAGCTCAAACCCGGCAGGCGCTCTCCTGAAGTGTGGAGCATCTCCCTCCCCTGATTTGACCGGAAT CCAATTAAACCTCTCAACAT
Downstream 100 bases:
>100_bases ACGCAATTATGTTCATGCCTCCCGTCTTACCCCTGATGAAAAAGCCCGCACGCCTCTGCCTGGCGGCGGGAACTCTGTTC ACCCTTTTCCTTACCCCCCT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 850; Mature: 850
Protein sequence:
>850_residues MHMTRSLTRISKACGSALAALLLIAAPAADASFSVDVRTSGTVPDLPDPAGRAGMVAGTVTEDDGSQSVIAAGGANFPQA APGASTPEERGPKTYYQDIFKLRNGQWSKAGTLPVPLGYAAFASVGKGLAVAGGHNAQGILKDALLIKTDGSVEKLPPLP VPVTEASCAAHGNKLFVIGGRDREQPETALNTIYMLDTTPDTDKMKWVSLPPFPGEGRILSTAAVCDSTLFIIGGCSLSR DNSGETSRTYLSDMIGYDMTSKDPSKWGSSGRQQLAGPGMPVAAAAGPAPVRENSILLIGGDKRGNSPDPSRPVAQSRDI LVYDVIGNTWTRQGEWPVGIATVPAVVRGSEIMTISGETAPGVRTPANASASAGYHFEMSTVDYAVLILTIIVLAIIIVS AVRNGVKNVASVTDPNTKPGLWAWVAVIVLWFVVMLNYFDRQLLSALHEPIVRDIPQTEAQFGMVTSVFLLIYALLSPVG GFLADRYSRRLMILCSLVVWSVVTWWTGHAEDYTSLLIARGAMGISEAFYIPAALALITDYHRGSTRSIATGLHMSGIYV GMAVAGFGATMASWTGWRMTFALFGLIGVAYAVILILFLKDPAKAPADTAQAKKPSVPEEKTVLLNVDNDEQAIKEPSSK LSTGAVLSSLLSGRPMWMLLAVVAFAGAGNWFLLTWYPTLLQDKYQLSSAEAGPAATLWSSVAKYVAVLGGAILADMWYR RNARARALVPGITFTISGPLVVLALLPGIFGWDITVPLVLMLGLVATQGLAQGSLDATLMPVLRSHIDERYSATGYGLLN LTSAGVGALISFFGGWFKDQGVPLTTTLAAAGCLMLFCGLLLLMLPRPKH
Sequences:
>Translated_850_residues MHMTRSLTRISKACGSALAALLLIAAPAADASFSVDVRTSGTVPDLPDPAGRAGMVAGTVTEDDGSQSVIAAGGANFPQA APGASTPEERGPKTYYQDIFKLRNGQWSKAGTLPVPLGYAAFASVGKGLAVAGGHNAQGILKDALLIKTDGSVEKLPPLP VPVTEASCAAHGNKLFVIGGRDREQPETALNTIYMLDTTPDTDKMKWVSLPPFPGEGRILSTAAVCDSTLFIIGGCSLSR DNSGETSRTYLSDMIGYDMTSKDPSKWGSSGRQQLAGPGMPVAAAAGPAPVRENSILLIGGDKRGNSPDPSRPVAQSRDI LVYDVIGNTWTRQGEWPVGIATVPAVVRGSEIMTISGETAPGVRTPANASASAGYHFEMSTVDYAVLILTIIVLAIIIVS AVRNGVKNVASVTDPNTKPGLWAWVAVIVLWFVVMLNYFDRQLLSALHEPIVRDIPQTEAQFGMVTSVFLLIYALLSPVG GFLADRYSRRLMILCSLVVWSVVTWWTGHAEDYTSLLIARGAMGISEAFYIPAALALITDYHRGSTRSIATGLHMSGIYV GMAVAGFGATMASWTGWRMTFALFGLIGVAYAVILILFLKDPAKAPADTAQAKKPSVPEEKTVLLNVDNDEQAIKEPSSK LSTGAVLSSLLSGRPMWMLLAVVAFAGAGNWFLLTWYPTLLQDKYQLSSAEAGPAATLWSSVAKYVAVLGGAILADMWYR RNARARALVPGITFTISGPLVVLALLPGIFGWDITVPLVLMLGLVATQGLAQGSLDATLMPVLRSHIDERYSATGYGLLN LTSAGVGALISFFGGWFKDQGVPLTTTLAAAGCLMLFCGLLLLMLPRPKH >Mature_850_residues MHMTRSLTRISKACGSALAALLLIAAPAADASFSVDVRTSGTVPDLPDPAGRAGMVAGTVTEDDGSQSVIAAGGANFPQA APGASTPEERGPKTYYQDIFKLRNGQWSKAGTLPVPLGYAAFASVGKGLAVAGGHNAQGILKDALLIKTDGSVEKLPPLP VPVTEASCAAHGNKLFVIGGRDREQPETALNTIYMLDTTPDTDKMKWVSLPPFPGEGRILSTAAVCDSTLFIIGGCSLSR DNSGETSRTYLSDMIGYDMTSKDPSKWGSSGRQQLAGPGMPVAAAAGPAPVRENSILLIGGDKRGNSPDPSRPVAQSRDI LVYDVIGNTWTRQGEWPVGIATVPAVVRGSEIMTISGETAPGVRTPANASASAGYHFEMSTVDYAVLILTIIVLAIIIVS AVRNGVKNVASVTDPNTKPGLWAWVAVIVLWFVVMLNYFDRQLLSALHEPIVRDIPQTEAQFGMVTSVFLLIYALLSPVG GFLADRYSRRLMILCSLVVWSVVTWWTGHAEDYTSLLIARGAMGISEAFYIPAALALITDYHRGSTRSIATGLHMSGIYV GMAVAGFGATMASWTGWRMTFALFGLIGVAYAVILILFLKDPAKAPADTAQAKKPSVPEEKTVLLNVDNDEQAIKEPSSK LSTGAVLSSLLSGRPMWMLLAVVAFAGAGNWFLLTWYPTLLQDKYQLSSAEAGPAATLWSSVAKYVAVLGGAILADMWYR RNARARALVPGITFTISGPLVVLALLPGIFGWDITVPLVLMLGLVATQGLAQGSLDATLMPVLRSHIDERYSATGYGLLN LTSAGVGALISFFGGWFKDQGVPLTTTLAAAGCLMLFCGLLLLMLPRPKH
Specific function: Aldohexuronate transport system [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]
Homologues:
Organism=Homo sapiens, GI215490096, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI14042968, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI215490102, Length=137, Percent_Identity=32.1167883211679, Blast_Score=71, Evalue=4e-12, Organism=Escherichia coli, GI1789515, Length=353, Percent_Identity=25.2124645892351, Blast_Score=91, Evalue=5e-19, Organism=Escherichia coli, GI87082320, Length=309, Percent_Identity=27.1844660194175, Blast_Score=89, Evalue=9e-19, Organism=Escherichia coli, GI2367379, Length=276, Percent_Identity=25.3623188405797, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1789152, Length=342, Percent_Identity=23.9766081871345, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI2367193, Length=381, Percent_Identity=23.0971128608924, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17557872, Length=339, Percent_Identity=23.598820058997, Blast_Score=94, Evalue=3e-19, Organism=Caenorhabditis elegans, GI17539092, Length=405, Percent_Identity=24.6913580246914, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI71992409, Length=195, Percent_Identity=25.6410256410256, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17535049, Length=412, Percent_Identity=23.0582524271845, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI193209775, Length=343, Percent_Identity=20.6997084548105, Blast_Score=69, Evalue=1e-11, Organism=Drosophila melanogaster, GI17864456, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654044, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654039, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654037, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=3e-15, Organism=Drosophila melanogaster, GI24654041, Length=190, Percent_Identity=29.4736842105263, Blast_Score=81, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004744 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 89904; Mature: 89904
Theoretical pI: Translated: 7.81; Mature: 7.81
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHMTRSLTRISKACGSALAALLLIAAPAADASFSVDVRTSGTVPDLPDPAGRAGMVAGTV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE TEDDGSQSVIAAGGANFPQAAPGASTPEERGPKTYYQDIFKLRNGQWSKAGTLPVPLGYA ECCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHH AFASVGKGLAVAGGHNAQGILKDALLIKTDGSVEKLPPLPVPVTEASCAAHGNKLFVIGG HHHHHCCCEEEECCCCCCHHHHCEEEEECCCCHHCCCCCCCCCCCCHHHCCCCEEEEECC RDREQPETALNTIYMLDTTPDTDKMKWVSLPPFPGEGRILSTAAVCDSTLFIIGGCSLSR CCCCCCHHHHCEEEEEECCCCCCCEEEEECCCCCCCCCEEEHHHHHCCEEEEEECCCCCC DNSGETSRTYLSDMIGYDMTSKDPSKWGSSGRQQLAGPGMPVAAAAGPAPVRENSILLIG CCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCCCCEECCCCCCCCCCCEEEEEE GDKRGNSPDPSRPVAQSRDILVYDVIGNTWTRQGEWPVGIATVPAVVRGSEIMTISGETA CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC PGVRTPANASASAGYHFEMSTVDYAVLILTIIVLAIIIVSAVRNGVKNVASVTDPNTKPG CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LWAWVAVIVLWFVVMLNYFDRQLLSALHEPIVRDIPQTEAQFGMVTSVFLLIYALLSPVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GFLADRYSRRLMILCSLVVWSVVTWWTGHAEDYTSLLIARGAMGISEAFYIPAALALITD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YHRGSTRSIATGLHMSGIYVGMAVAGFGATMASWTGWRMTFALFGLIGVAYAVILILFLK HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC DPAKAPADTAQAKKPSVPEEKTVLLNVDNDEQAIKEPSSKLSTGAVLSSLLSGRPMWMLL CCCCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH AVVAFAGAGNWFLLTWYPTLLQDKYQLSSAEAGPAATLWSSVAKYVAVLGGAILADMWYR HHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RNARARALVPGITFTISGPLVVLALLPGIFGWDITVPLVLMLGLVATQGLAQGSLDATLM CCCCCEEEECCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH PVLRSHIDERYSATGYGLLNLTSAGVGALISFFGGWFKDQGVPLTTTLAAAGCLMLFCGL HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHH LLLMLPRPKH HHHHCCCCCC >Mature Secondary Structure MHMTRSLTRISKACGSALAALLLIAAPAADASFSVDVRTSGTVPDLPDPAGRAGMVAGTV CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEE TEDDGSQSVIAAGGANFPQAAPGASTPEERGPKTYYQDIFKLRNGQWSKAGTLPVPLGYA ECCCCCCEEEEECCCCCCCCCCCCCCCHHCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHH AFASVGKGLAVAGGHNAQGILKDALLIKTDGSVEKLPPLPVPVTEASCAAHGNKLFVIGG HHHHHCCCEEEECCCCCCHHHHCEEEEECCCCHHCCCCCCCCCCCCHHHCCCCEEEEECC RDREQPETALNTIYMLDTTPDTDKMKWVSLPPFPGEGRILSTAAVCDSTLFIIGGCSLSR CCCCCCHHHHCEEEEEECCCCCCCEEEEECCCCCCCCCEEEHHHHHCCEEEEEECCCCCC DNSGETSRTYLSDMIGYDMTSKDPSKWGSSGRQQLAGPGMPVAAAAGPAPVRENSILLIG CCCCCHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHCCCCCCEECCCCCCCCCCCEEEEEE GDKRGNSPDPSRPVAQSRDILVYDVIGNTWTRQGEWPVGIATVPAVVRGSEIMTISGETA CCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCC PGVRTPANASASAGYHFEMSTVDYAVLILTIIVLAIIIVSAVRNGVKNVASVTDPNTKPG CCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH LWAWVAVIVLWFVVMLNYFDRQLLSALHEPIVRDIPQTEAQFGMVTSVFLLIYALLSPVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH GFLADRYSRRLMILCSLVVWSVVTWWTGHAEDYTSLLIARGAMGISEAFYIPAALALITD HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH YHRGSTRSIATGLHMSGIYVGMAVAGFGATMASWTGWRMTFALFGLIGVAYAVILILFLK HCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC DPAKAPADTAQAKKPSVPEEKTVLLNVDNDEQAIKEPSSKLSTGAVLSSLLSGRPMWMLL CCCCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCHHHHHHHHHHHHHHCCCHHHHHH AVVAFAGAGNWFLLTWYPTLLQDKYQLSSAEAGPAATLWSSVAKYVAVLGGAILADMWYR HHHHHHCCCCEEEEEECHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RNARARALVPGITFTISGPLVVLALLPGIFGWDITVPLVLMLGLVATQGLAQGSLDATLM CCCCCEEEECCEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHH PVLRSHIDERYSATGYGLLNLTSAGVGALISFFGGWFKDQGVPLTTTLAAAGCLMLFCGL HHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHHHHH LLLMLPRPKH HHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579062; 9384377 [H]