Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735914

Identifier: 187735914

GI number: 187735914

Start: 1707539

End: 1708750

Strand: Reverse

Name: 187735914

Synonym: Amuc_1423

Alternate gene names: NA

Gene position: 1708750-1707539 (Counterclockwise)

Preceding gene: 187735915

Following gene: 187735912

Centisome position: 64.14

GC content: 56.11

Gene sequence:

>1212_bases
ATGTTCATGCCTCCCGTCTTACCCCTGATGAAAAAGCCCGCACGCCTCTGCCTGGCGGCGGGAACTCTGTTCACCCTTTT
CCTTACCCCCCTTGCACAGGGGCGCACCTGGACCAACCTCCAAGGGAAAAAACTGGAAGCAGAATTCATCAGGCTGGACG
GCCAGAAAGCCGTGCTGAAACGTTCCGGCGGCCAAACCGTCTCCATTCCCCTCACCCAGCTCTCCCGGGAAGACAGGGAT
TTCATCGCGGAACAGGAAAAAGGAGGGGCACTCCCCTCCAATACGGCGGACAATTACCACCTGCCGTGGCCCAGGAGCGT
CAAATGCCCGGACAATTTCAAGGTGGAAACCATCAAGGAGGAACCGGGAGAATATATTTATGAAACACCCCATTTCCGCT
TCATCTGCGACGCCAAGCTGGGCACCGGCATGATCAAGCGCCTGGGCCTCCTCTTTGAGGCCACCCACTTGGCCAACAAA
ACCCTTCCTATAGGAAACTCCCCTGCCCATGACGATTCCGCCAAATTCCCCGCCTACCTGTATGAAAAATTCAGCACCTA
TCTGGAAAACGGCGGACGCGAAGGCACGGCGGGCATCTTCCTGGGGACAACGCGGCCAGGGGACCGCGGAAGAATTCTGG
TTCCGTTCGATTCCCTGGGAGTCAAAACCATGGGAAGCACATACGTCATTGACCGTGACAAGGACGCTTCCACCCTCATC
CATGAACTGACGCACCAGCTCATGTCTTCGCAGGCCAAGCAGGCCAGCTGGTTTTGTGAAGGCTCCGCGGAATACATGGG
CATGACGCCCTATGCCGGAGGCCGCTTCAACTTTGGAGCCAACCGATCCCACATTGTCTCCCGCGTGACGGAATACGGCA
AAAAAAATACGGGGGGACGGGCCCTTGGGGATGACTTTGAGGCGCCCGGCCTGGAAGCTTACATGAACATGCCCTATTCC
CAGTTCACGGGAGAAAACGCCAACCTGAACTACGGCCTGGCCGCCCTGATGGCCTACTATTTTTACCACATGGACGGCAA
GGGCGATGCCCGGCGCATCAAGAATTACATGAAAGCCATTCAATCCGGAACCAGTGAAAAGGAAGCTCAGAAACTCCTCC
TTGACGGACGGAGCTATGAAGAACTGGCCAAAGAAATTGAACAGAAATGGCGCAAGGCCGGCGTTAAAATCCGCTTCCGT
TCCTCTTCCTGA

Upstream 100 bases:

>100_bases
GCGTTCCGCTGACCACCACCCTGGCGGCGGCAGGATGCCTGATGCTGTTCTGCGGGCTGCTGCTCCTGATGCTGCCGCGT
CCCAAACATTAAACGCAATT

Downstream 100 bases:

>100_bases
ACTGTGCCGCGCGTTCCGTGGAAACAGTCCCCCGACGGAAAACGAAGGGCGGTTTGTGCCCTGAAAAACCGTTGACACGG
GAGGGAAAGGCGGCACACTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MFMPPVLPLMKKPARLCLAAGTLFTLFLTPLAQGRTWTNLQGKKLEAEFIRLDGQKAVLKRSGGQTVSIPLTQLSREDRD
FIAEQEKGGALPSNTADNYHLPWPRSVKCPDNFKVETIKEEPGEYIYETPHFRFICDAKLGTGMIKRLGLLFEATHLANK
TLPIGNSPAHDDSAKFPAYLYEKFSTYLENGGREGTAGIFLGTTRPGDRGRILVPFDSLGVKTMGSTYVIDRDKDASTLI
HELTHQLMSSQAKQASWFCEGSAEYMGMTPYAGGRFNFGANRSHIVSRVTEYGKKNTGGRALGDDFEAPGLEAYMNMPYS
QFTGENANLNYGLAALMAYYFYHMDGKGDARRIKNYMKAIQSGTSEKEAQKLLLDGRSYEELAKEIEQKWRKAGVKIRFR
SSS

Sequences:

>Translated_403_residues
MFMPPVLPLMKKPARLCLAAGTLFTLFLTPLAQGRTWTNLQGKKLEAEFIRLDGQKAVLKRSGGQTVSIPLTQLSREDRD
FIAEQEKGGALPSNTADNYHLPWPRSVKCPDNFKVETIKEEPGEYIYETPHFRFICDAKLGTGMIKRLGLLFEATHLANK
TLPIGNSPAHDDSAKFPAYLYEKFSTYLENGGREGTAGIFLGTTRPGDRGRILVPFDSLGVKTMGSTYVIDRDKDASTLI
HELTHQLMSSQAKQASWFCEGSAEYMGMTPYAGGRFNFGANRSHIVSRVTEYGKKNTGGRALGDDFEAPGLEAYMNMPYS
QFTGENANLNYGLAALMAYYFYHMDGKGDARRIKNYMKAIQSGTSEKEAQKLLLDGRSYEELAKEIEQKWRKAGVKIRFR
SSS
>Mature_403_residues
MFMPPVLPLMKKPARLCLAAGTLFTLFLTPLAQGRTWTNLQGKKLEAEFIRLDGQKAVLKRSGGQTVSIPLTQLSREDRD
FIAEQEKGGALPSNTADNYHLPWPRSVKCPDNFKVETIKEEPGEYIYETPHFRFICDAKLGTGMIKRLGLLFEATHLANK
TLPIGNSPAHDDSAKFPAYLYEKFSTYLENGGREGTAGIFLGTTRPGDRGRILVPFDSLGVKTMGSTYVIDRDKDASTLI
HELTHQLMSSQAKQASWFCEGSAEYMGMTPYAGGRFNFGANRSHIVSRVTEYGKKNTGGRALGDDFEAPGLEAYMNMPYS
QFTGENANLNYGLAALMAYYFYHMDGKGDARRIKNYMKAIQSGTSEKEAQKLLLDGRSYEELAKEIEQKWRKAGVKIRFR
SSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44990; Mature: 44990

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMPPVLPLMKKPARLCLAAGTLFTLFLTPLAQGRTWTNLQGKKLEAEFIRLDGQKAVLK
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEHEEECCHHHHHH
RSGGQTVSIPLTQLSREDRDFIAEQEKGGALPSNTADNYHLPWPRSVKCPDNFKVETIKE
CCCCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
EPGEYIYETPHFRFICDAKLGTGMIKRLGLLFEATHLANKTLPIGNSPAHDDSAKFPAYL
CCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
YEKFSTYLENGGREGTAGIFLGTTRPGDRGRILVPFDSLGVKTMGSTYVIDRDKDASTLI
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEECCCEEEEECCCCHHHHH
HELTHQLMSSQAKQASWFCEGSAEYMGMTPYAGGRFNFGANRSHIVSRVTEYGKKNTGGR
HHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
ALGDDFEAPGLEAYMNMPYSQFTGENANLNYGLAALMAYYFYHMDGKGDARRIKNYMKAI
CCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QSGTSEKEAQKLLLDGRSYEELAKEIEQKWRKAGVKIRFRSSS
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCC
>Mature Secondary Structure
MFMPPVLPLMKKPARLCLAAGTLFTLFLTPLAQGRTWTNLQGKKLEAEFIRLDGQKAVLK
CCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEHEEECCHHHHHH
RSGGQTVSIPLTQLSREDRDFIAEQEKGGALPSNTADNYHLPWPRSVKCPDNFKVETIKE
CCCCCEEEEEHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
EPGEYIYETPHFRFICDAKLGTGMIKRLGLLFEATHLANKTLPIGNSPAHDDSAKFPAYL
CCCCEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHH
YEKFSTYLENGGREGTAGIFLGTTRPGDRGRILVPFDSLGVKTMGSTYVIDRDKDASTLI
HHHHHHHHHCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCEECCCEEEEECCCCHHHHH
HELTHQLMSSQAKQASWFCEGSAEYMGMTPYAGGRFNFGANRSHIVSRVTEYGKKNTGGR
HHHHHHHHHHHHHHHHEEECCCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCC
ALGDDFEAPGLEAYMNMPYSQFTGENANLNYGLAALMAYYFYHMDGKGDARRIKNYMKAI
CCCCCCCCCCHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
QSGTSEKEAQKLLLDGRSYEELAKEIEQKWRKAGVKIRFRSSS
HCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA