Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735911

Identifier: 187735911

GI number: 187735911

Start: 1698044

End: 1699048

Strand: Direct

Name: 187735911

Synonym: Amuc_1419

Alternate gene names: NA

Gene position: 1698044-1699048 (Clockwise)

Preceding gene: 187735910

Following gene: 187735913

Centisome position: 63.74

GC content: 57.31

Gene sequence:

>1005_bases
ATGCTCCCCGGTAGTCTGAGCATGATGAAACTGCTGCATTGTTTTCTGGCTGTCCTTTGGTGGTGTTCTCCTGTACCGGC
TGCGGATATTCCCGATGCGGAGAAGGCGGAATATGGCGGGTATCCCGGGCGGTACATCCTTCTTGATTCTCCTCAACCCG
ACCGGCAGAGCCTGTCCACTCCCGTAGCTGCCTATGTCCATGACAATGGGATGGAAGTAGCTCTCATTGGTGCTGTTCAT
GTGGCGGAACCGGAATATTACGACCGGCTGAATAAGCTGTTCCGCAGGTACGATGTGCTGCTTTTTGAAATGATTGGCGG
AGAGGGCCTCCGGCGGGAAGAGGAATTGCGCCGCAAGATAGACCGCAGCAAGCCGCTGGGGGGGCTGACTCTGGAAGAGG
CGCGGGAATGGAACCGGATAGTGGAATGGAGGAAGAAATGCGGGCAGGAGGAAAAGTCTTTTTTAATGGGGCTGCTGGGG
GGCGCCTACAAGGAGTTGAGCAATATGCTGGGACTCCAGACCCAGCATCAGGGCATTGATTATTCCGCAGCCCATTTCGT
CCATGCGGACATGACGCTGGATGAATTCCGCGAGGCGCAGGCCAGAAAGGGTGAAAGCATTGCCGGCCTGATGCTTAAAT
CCGTCTTGTCCTCCCTGGTTGAGAAAACCGGAACGAACCGGGCCGGTGAATTTGGATTGATGGCGGATTTCCTGGCCGGC
AATAAAACGGGGTTGAAGAATAAGCTGATGGGCATGATGGCCAATGCTCCTAATGGTCTGGAGAATACCGTGATTCTGGA
AGGCCGGAACGCCAAGTGCATGGAAGTGTTTGACCGTTGGAGCGGCAAGGGCGTGCGCAGGATAGGCGTCTTTTACGGAG
CGGCGCATCTTCCCGGCCTGCACGGCGCTCTTTTGGAACGCGGCTACCGTCTTCGGGAGGTGCGCTGGCTTCCGGCGTGG
AGCACCAGGGAGCAGGGTGCGGACGGGCAGCGCGGGGAGGGTTGA

Upstream 100 bases:

>100_bases
GTTTTGCGATTCCGGCTTTTTGAATAAGGTGGGAATCCATGCTCATGCCGTCTTTCCATTCCGGAAAGGAAGGCAGTCTT
TTTTTGGGCTTGCTCTTAAT

Downstream 100 bases:

>100_bases
GTTTTGTTAATTTTTCCCCGGTTTTTCCAGGACAGGCGGTGTAGCGGCGGATGAACATGGTTTTCCGCCGCTCCGCCTTT
GAAGAGGGAAGAAGAGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MLPGSLSMMKLLHCFLAVLWWCSPVPAADIPDAEKAEYGGYPGRYILLDSPQPDRQSLSTPVAAYVHDNGMEVALIGAVH
VAEPEYYDRLNKLFRRYDVLLFEMIGGEGLRREEELRRKIDRSKPLGGLTLEEAREWNRIVEWRKKCGQEEKSFLMGLLG
GAYKELSNMLGLQTQHQGIDYSAAHFVHADMTLDEFREAQARKGESIAGLMLKSVLSSLVEKTGTNRAGEFGLMADFLAG
NKTGLKNKLMGMMANAPNGLENTVILEGRNAKCMEVFDRWSGKGVRRIGVFYGAAHLPGLHGALLERGYRLREVRWLPAW
STREQGADGQRGEG

Sequences:

>Translated_334_residues
MLPGSLSMMKLLHCFLAVLWWCSPVPAADIPDAEKAEYGGYPGRYILLDSPQPDRQSLSTPVAAYVHDNGMEVALIGAVH
VAEPEYYDRLNKLFRRYDVLLFEMIGGEGLRREEELRRKIDRSKPLGGLTLEEAREWNRIVEWRKKCGQEEKSFLMGLLG
GAYKELSNMLGLQTQHQGIDYSAAHFVHADMTLDEFREAQARKGESIAGLMLKSVLSSLVEKTGTNRAGEFGLMADFLAG
NKTGLKNKLMGMMANAPNGLENTVILEGRNAKCMEVFDRWSGKGVRRIGVFYGAAHLPGLHGALLERGYRLREVRWLPAW
STREQGADGQRGEG
>Mature_334_residues
MLPGSLSMMKLLHCFLAVLWWCSPVPAADIPDAEKAEYGGYPGRYILLDSPQPDRQSLSTPVAAYVHDNGMEVALIGAVH
VAEPEYYDRLNKLFRRYDVLLFEMIGGEGLRREEELRRKIDRSKPLGGLTLEEAREWNRIVEWRKKCGQEEKSFLMGLLG
GAYKELSNMLGLQTQHQGIDYSAAHFVHADMTLDEFREAQARKGESIAGLMLKSVLSSLVEKTGTNRAGEFGLMADFLAG
NKTGLKNKLMGMMANAPNGLENTVILEGRNAKCMEVFDRWSGKGVRRIGVFYGAAHLPGLHGALLERGYRLREVRWLPAW
STREQGADGQRGEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37303; Mature: 37303

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGSLSMMKLLHCFLAVLWWCSPVPAADIPDAEKAEYGGYPGRYILLDSPQPDRQSLST
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHCC
PVAAYVHDNGMEVALIGAVHVAEPEYYDRLNKLFRRYDVLLFEMIGGEGLRREEELRRKI
CEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DRSKPLGGLTLEEAREWNRIVEWRKKCGQEEKSFLMGLLGGAYKELSNMLGLQTQHQGID
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
YSAAHFVHADMTLDEFREAQARKGESIAGLMLKSVLSSLVEKTGTNRAGEFGLMADFLAG
CCHHHHEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
NKTGLKNKLMGMMANAPNGLENTVILEGRNAKCMEVFDRWSGKGVRRIGVFYGAAHLPGL
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
HGALLERGYRLREVRWLPAWSTREQGADGQRGEG
HHHHHHCCCHHHHEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLPGSLSMMKLLHCFLAVLWWCSPVPAADIPDAEKAEYGGYPGRYILLDSPQPDRQSLST
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEECCCCCCHHHHCC
PVAAYVHDNGMEVALIGAVHVAEPEYYDRLNKLFRRYDVLLFEMIGGEGLRREEELRRKI
CEEEEEECCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
DRSKPLGGLTLEEAREWNRIVEWRKKCGQEEKSFLMGLLGGAYKELSNMLGLQTQHQGID
HHCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
YSAAHFVHADMTLDEFREAQARKGESIAGLMLKSVLSSLVEKTGTNRAGEFGLMADFLAG
CCHHHHEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCC
NKTGLKNKLMGMMANAPNGLENTVILEGRNAKCMEVFDRWSGKGVRRIGVFYGAAHLPGL
CCCCHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCH
HGALLERGYRLREVRWLPAWSTREQGADGQRGEG
HHHHHHCCCHHHHEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA