Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735903
Identifier: 187735903
GI number: 187735903
Start: 1688582
End: 1689256
Strand: Direct
Name: 187735903
Synonym: Amuc_1411
Alternate gene names: NA
Gene position: 1688582-1689256 (Clockwise)
Preceding gene: 187735902
Following gene: 187735904
Centisome position: 63.38
GC content: 58.22
Gene sequence:
>675_bases ATGAAAGCCAGGTTCGTGACAAAGGCGGCGCTTAGTGCGCTGGCACTTGCGTTTGCGGGTACCCTTCCCGGTATGGCTCA GCAAACTGCTTCTCCGGCAGCCGCTCCGGCTGTTGATCAGGTTAAAGCCTCCGCTGTTGAAAAGGCTTTTATGAAGAAAA TGGCAGATATTGTTCAGGCCGGATTGAAAGCCGGTGCTCTGGATATGAAAGCGGTGTCCGGAGTTTTGAACGATGCCGCT AAGGCTGGTGTGTCCGATCATGTGATGGGTGCGATGGTATCCATGGCTGCGGGCGCTTTCCCGTCCAACGCTCCTGCCGT TGCTTCCGCCGCTGTCCGGAGCTACGGGCCCGGGGTGAAGGAAGAACAGGTGCGCAATGTGATCGCTTCCGCTGTTTCCT CCCAGCCCCATCCGTATGCATCCGTGGCTCCCATTTCGGAAGCGGTTGAAAAAGCTTTGGGCAATTCTCCGGTAGCCGGT ACTGTTCCTTCCATTGCTGTGGCCGTGGCTGCCCAGACTCCTGATAACCCCCTCTCAGGGGTAACTGTCCAGGAACATGG CCTGGTAAAGCCTGTTGAAGATGTTGCCGAGGGCTCCCTGGTTCTGCCGGGCGGTCTTCCTGTGGGCGGCACGCCCACCA GCCCCGCTCCCGTGTCCAATGCTGCTGGCAATTAA
Upstream 100 bases:
>100_bases CTTAATGGTAAAGCTCCAGCCTTCCAAGCTGATTATACGGGTTCGATTCCCGTTACCCGCTCCATTTTTTTATTAAATTC ACCTGCTAAATACTTCCTTT
Downstream 100 bases:
>100_bases CCTGATTCTTATTTAATAAAATAGCATGAAGAGTCTTTTTTATCTCTCCCTGGTGGCCGCCGGCATGTTTGCCGTCCATG CCAACGGGCAGTCTCTGTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN
Sequences:
>Translated_224_residues MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN >Mature_224_residues MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21909; Mature: 21909
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLKAGALDMKAVSGVLNDAAKAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVK HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC EEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAGTVPSIAVAVAAQTPDNPLSG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCC VTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN CEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQA CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH GLKAGALDMKAVSGVLNDAAKAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVK HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC EEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAGTVPSIAVAVAAQTPDNPLSG HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCC VTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN CEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA