Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735903

Identifier: 187735903

GI number: 187735903

Start: 1688582

End: 1689256

Strand: Direct

Name: 187735903

Synonym: Amuc_1411

Alternate gene names: NA

Gene position: 1688582-1689256 (Clockwise)

Preceding gene: 187735902

Following gene: 187735904

Centisome position: 63.38

GC content: 58.22

Gene sequence:

>675_bases
ATGAAAGCCAGGTTCGTGACAAAGGCGGCGCTTAGTGCGCTGGCACTTGCGTTTGCGGGTACCCTTCCCGGTATGGCTCA
GCAAACTGCTTCTCCGGCAGCCGCTCCGGCTGTTGATCAGGTTAAAGCCTCCGCTGTTGAAAAGGCTTTTATGAAGAAAA
TGGCAGATATTGTTCAGGCCGGATTGAAAGCCGGTGCTCTGGATATGAAAGCGGTGTCCGGAGTTTTGAACGATGCCGCT
AAGGCTGGTGTGTCCGATCATGTGATGGGTGCGATGGTATCCATGGCTGCGGGCGCTTTCCCGTCCAACGCTCCTGCCGT
TGCTTCCGCCGCTGTCCGGAGCTACGGGCCCGGGGTGAAGGAAGAACAGGTGCGCAATGTGATCGCTTCCGCTGTTTCCT
CCCAGCCCCATCCGTATGCATCCGTGGCTCCCATTTCGGAAGCGGTTGAAAAAGCTTTGGGCAATTCTCCGGTAGCCGGT
ACTGTTCCTTCCATTGCTGTGGCCGTGGCTGCCCAGACTCCTGATAACCCCCTCTCAGGGGTAACTGTCCAGGAACATGG
CCTGGTAAAGCCTGTTGAAGATGTTGCCGAGGGCTCCCTGGTTCTGCCGGGCGGTCTTCCTGTGGGCGGCACGCCCACCA
GCCCCGCTCCCGTGTCCAATGCTGCTGGCAATTAA

Upstream 100 bases:

>100_bases
CTTAATGGTAAAGCTCCAGCCTTCCAAGCTGATTATACGGGTTCGATTCCCGTTACCCGCTCCATTTTTTTATTAAATTC
ACCTGCTAAATACTTCCTTT

Downstream 100 bases:

>100_bases
CCTGATTCTTATTTAATAAAATAGCATGAAGAGTCTTTTTTATCTCTCCCTGGTGGCCGCCGGCATGTTTGCCGTCCATG
CCAACGGGCAGTCTCTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA
KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG
TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN

Sequences:

>Translated_224_residues
MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA
KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG
TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN
>Mature_224_residues
MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQAGLKAGALDMKAVSGVLNDAA
KAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVKEEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAG
TVPSIAVAVAAQTPDNPLSGVTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21909; Mature: 21909

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLKAGALDMKAVSGVLNDAAKAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVK
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
EEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAGTVPSIAVAVAAQTPDNPLSG
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCC
VTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN
CEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKARFVTKAALSALALAFAGTLPGMAQQTASPAAAPAVDQVKASAVEKAFMKKMADIVQA
CCCHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GLKAGALDMKAVSGVLNDAAKAGVSDHVMGAMVSMAAGAFPSNAPAVASAAVRSYGPGVK
HHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC
EEQVRNVIASAVSSQPHPYASVAPISEAVEKALGNSPVAGTVPSIAVAVAAQTPDNPLSG
HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHEECCCCCCCCCC
VTVQEHGLVKPVEDVAEGSLVLPGGLPVGGTPTSPAPVSNAAGN
CEECCCCCCCCHHHHHCCCEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA