Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is fabG [H]

Identifier: 187735882

GI number: 187735882

Start: 1659074

End: 1659724

Strand: Direct

Name: fabG [H]

Synonym: Amuc_1389

Alternate gene names: 187735882

Gene position: 1659074-1659724 (Clockwise)

Preceding gene: 187735881

Following gene: 187735883

Centisome position: 62.28

GC content: 61.44

Gene sequence:

>651_bases
ATGCGGAGAGTGTTCATCAGCGGCGGTCACGGCGGTTTGGCGCGGGCCATCGTGGAATGTTTTTCCGCTGCGGGATGGGA
GACGGATGCCCCGAGCCATGCCGTACTGGATGTGGGAGACCGTTCCGCCGTACGCCGCTGGTTTGATTGCCATGCCGCGT
ATGATTTGGCGGTTTGCGCCGCCGGAATTACCAGGGACAGGCCGTTCCTGAAGCAGACGGAGGAGGAGTGGGACGAGGTA
ATGAATGTGAATGTGACGGGAGCCGCCTGGTGCGGCCGATGCGCCGCCGCCGCCATGGTGCGGGAGAAGAGGGAGGGGCA
GGTGGTGATGATCGGTTCTTATGCGGCGCTCCGTCCGGCTTCGTCCCAGGCGGCTTATGCCGCTTCCAAGGCTGCTCTGG
CGGGCCTGGTGAAAAGCCTGGCGCGGGAATGGGGAAAGGATGGGATTCGCGTGAATCTGGTGTTGCCGGGGTTCATGCTG
ACGGAGATGACGGCCGTGCTGCGGGATAGCGTGAAAGAGGCGGCTTTGTCCCGGCATGTTTTGAGCCGGTTGAATACGCC
GGAACAGGCTGCGGCGTTTATCCTGTTTTTACAGGATGTTCTTACGGCGGCTTCCGGCCAGGTGTTCGATCTGGACAGCA
GGATTGTTTAA

Upstream 100 bases:

>100_bases
TCCCCAGGAGGAGGCTGTGGAACGGCTGGTGGATCTGATCAAGGAGTATGGGCGGTGGGTGGACCCCAAGTGAGGTTTTA
ACGTTGAGGGAACTTTTTTG

Downstream 100 bases:

>100_bases
TAATGGACAGCGGATTTATTATCCGCGTTCTCCTCTGTTGATGCTATATTTTCCAAAAAATCATTTTTTTAATAAAAATG
ATTGCCTGCGATGGTGCTGA

Product: short-chain dehydrogenase/reductase SDR

Products: NA

Alternate protein names: 3-ketoacyl-acyl carrier protein reductase [H]

Number of amino acids: Translated: 216; Mature: 216

Protein sequence:

>216_residues
MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV
MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML
TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV

Sequences:

>Translated_216_residues
MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV
MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML
TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV
>Mature_216_residues
MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCAAGITRDRPFLKQTEEEWDEV
MNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPASSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFML
TEMTAVLRDSVKEAALSRHVLSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV

Specific function: Fatty acid biosynthesis pathway; first reduction step. [C]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI15277342, Length=142, Percent_Identity=37.3239436619718, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI40254992, Length=144, Percent_Identity=32.6388888888889, Blast_Score=81, Evalue=6e-16,
Organism=Homo sapiens, GI32483357, Length=154, Percent_Identity=35.0649350649351, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI5031737, Length=149, Percent_Identity=33.5570469798658, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI7705925, Length=215, Percent_Identity=28.3720930232558, Blast_Score=76, Evalue=2e-14,
Organism=Homo sapiens, GI33667109, Length=136, Percent_Identity=34.5588235294118, Blast_Score=72, Evalue=3e-13,
Organism=Homo sapiens, GI4504505, Length=168, Percent_Identity=29.1666666666667, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI126723750, Length=132, Percent_Identity=35.6060606060606, Blast_Score=66, Evalue=3e-11,
Organism=Escherichia coli, GI1787335, Length=215, Percent_Identity=31.1627906976744, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789208, Length=145, Percent_Identity=31.0344827586207, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1788459, Length=143, Percent_Identity=33.5664335664336, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI87082100, Length=123, Percent_Identity=32.520325203252, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI2367365, Length=215, Percent_Identity=29.7674418604651, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790717, Length=145, Percent_Identity=33.1034482758621, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1786812, Length=221, Percent_Identity=29.4117647058824, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87082160, Length=116, Percent_Identity=32.7586206896552, Blast_Score=62, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17555706, Length=231, Percent_Identity=29.004329004329, Blast_Score=87, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI25147288, Length=149, Percent_Identity=32.8859060402685, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17568967, Length=202, Percent_Identity=32.1782178217822, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=239, Percent_Identity=27.1966527196653, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71994600, Length=165, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17560676, Length=147, Percent_Identity=31.2925170068027, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17561402, Length=134, Percent_Identity=29.8507462686567, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71994604, Length=149, Percent_Identity=33.5570469798658, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=157, Percent_Identity=33.7579617834395, Blast_Score=80, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24639444, Length=176, Percent_Identity=37.5, Blast_Score=110, Evalue=8e-25,
Organism=Drosophila melanogaster, GI21355319, Length=126, Percent_Identity=34.1269841269841, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24643142, Length=198, Percent_Identity=29.7979797979798, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI18859837, Length=151, Percent_Identity=27.8145695364238, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI23397609, Length=165, Percent_Identity=28.4848484848485, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17737361, Length=244, Percent_Identity=27.4590163934426, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011284
- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.1.1.100 [H]

Molecular weight: Translated: 23284; Mature: 23284

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCA
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
AGITRDRPFLKQTEEEWDEVMNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPA
HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC
SSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFMLTEMTAVLRDSVKEAALSRHV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV
HHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
>Mature Secondary Structure
MRRVFISGGHGGLARAIVECFSAAGWETDAPSHAVLDVGDRSAVRRWFDCHAAYDLAVCA
CCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHH
AGITRDRPFLKQTEEEWDEVMNVNVTGAAWCGRCAAAAMVREKREGQVVMIGSYAALRPA
HCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHCCC
SSQAAYAASKAALAGLVKSLAREWGKDGIRVNLVLPGFMLTEMTAVLRDSVKEAALSRHV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH
LSRLNTPEQAAAFILFLQDVLTAASGQVFDLDSRIV
HHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]