Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735856

Identifier: 187735856

GI number: 187735856

Start: 1633146

End: 1633742

Strand: Reverse

Name: 187735856

Synonym: Amuc_1363

Alternate gene names: NA

Gene position: 1633742-1633146 (Counterclockwise)

Preceding gene: 187735857

Following gene: 187735855

Centisome position: 61.32

GC content: 36.18

Gene sequence:

>597_bases
ATGAATTTCCATCTATCCTTTACAACGGGAAATAACCCCGAACAAGCCCCAAAGCAACAAATAGATGAAACTGAAAAAAT
TCGCTGTGATTTTGAAAATACTCTTACTATAGAAAACTATAAAATACAACAACAAGAAAGGCTTCGTGCGTTGGAAGTTT
CATCACGAGCGCAAGCCAATTGGGACAAAACAACTATAACAATTTCATCCTCCGCCATTGGTCTAATATATCTGCTAAAA
GGAGAAAATATAATACTTTCTACCATACATTTTCGTATATCACTGATTTTGTGGGCAGCAGTTGTTTCTTGTGTAATGAT
TTCATTCCTTGCTGGCGCAACGCTTCATCGTGAGTACGCTAACAAAATAGCTCATCAACAAAATGGAGATGAAAAACAAG
CTGCCAAAAGTGATGAAGAAGCAAATAAAATGGATAAAATAGTAAAATATTGCAACAACGCAGCATTTCTTTTATTCTTG
TTCGCATTAGCAAGTACTGTATATCTTTCCTTTGAAGCCATATCAAACAGCCATGCCAGAACAGCCAATCAACAACAGAC
AAACGAGAAAGTCGAACAAGGAATTAATCACACATAG

Upstream 100 bases:

>100_bases
TCTTTATTAAATAAAAATGAATGTGAAAATATAGTAAGAGAAAGCAAATAGAAAAAGTTCTTAATTTTATATTTATTCAT
TGAACTAGCAAATATTTATT

Downstream 100 bases:

>100_bases
TGACAGAAAACCAGTATATCTCCGTCCTATTTCCATGGATAAAATGAAACTCCCATCTTCCCTTTGTCCCAAGGAATTGT
CTAAAGACAAGCCAAGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MNFHLSFTTGNNPEQAPKQQIDETEKIRCDFENTLTIENYKIQQQERLRALEVSSRAQANWDKTTITISSSAIGLIYLLK
GENIILSTIHFRISLILWAAVVSCVMISFLAGATLHREYANKIAHQQNGDEKQAAKSDEEANKMDKIVKYCNNAAFLLFL
FALASTVYLSFEAISNSHARTANQQQTNEKVEQGINHT

Sequences:

>Translated_198_residues
MNFHLSFTTGNNPEQAPKQQIDETEKIRCDFENTLTIENYKIQQQERLRALEVSSRAQANWDKTTITISSSAIGLIYLLK
GENIILSTIHFRISLILWAAVVSCVMISFLAGATLHREYANKIAHQQNGDEKQAAKSDEEANKMDKIVKYCNNAAFLLFL
FALASTVYLSFEAISNSHARTANQQQTNEKVEQGINHT
>Mature_198_residues
MNFHLSFTTGNNPEQAPKQQIDETEKIRCDFENTLTIENYKIQQQERLRALEVSSRAQANWDKTTITISSSAIGLIYLLK
GENIILSTIHFRISLILWAAVVSCVMISFLAGATLHREYANKIAHQQNGDEKQAAKSDEEANKMDKIVKYCNNAAFLLFL
FALASTVYLSFEAISNSHARTANQQQTNEKVEQGINHT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22340; Mature: 22340

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFHLSFTTGNNPEQAPKQQIDETEKIRCDFENTLTIENYKIQQQERLRALEVSSRAQAN
CCEEEEECCCCCCCCCHHHHCCHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCC
WDKTTITISSSAIGLIYLLKGENIILSTIHFRISLILWAAVVSCVMISFLAGATLHREYA
CCCEEEEEECCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKIAHQQNGDEKQAAKSDEEANKMDKIVKYCNNAAFLLFLFALASTVYLSFEAISNSHAR
HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
TANQQQTNEKVEQGINHT
CCHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNFHLSFTTGNNPEQAPKQQIDETEKIRCDFENTLTIENYKIQQQERLRALEVSSRAQAN
CCEEEEECCCCCCCCCHHHHCCHHHHEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCC
WDKTTITISSSAIGLIYLLKGENIILSTIHFRISLILWAAVVSCVMISFLAGATLHREYA
CCCEEEEEECCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NKIAHQQNGDEKQAAKSDEEANKMDKIVKYCNNAAFLLFLFALASTVYLSFEAISNSHAR
HHHHHCCCCCHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHH
TANQQQTNEKVEQGINHT
CCHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA