Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735845

Identifier: 187735845

GI number: 187735845

Start: 1625276

End: 1626028

Strand: Direct

Name: 187735845

Synonym: Amuc_1352

Alternate gene names: NA

Gene position: 1625276-1626028 (Clockwise)

Preceding gene: 187735844

Following gene: 187735847

Centisome position: 61.01

GC content: 50.33

Gene sequence:

>753_bases
ATGAATTACGCAATATTCTGTTATAGAGAAGATTATAAATGCCTTGAATTGTGCGTTGGTCAAATCCGCCGGGTTGATCC
TGATTGTACGATTTACCTGTTTGACGACGGAAAAGCCCCTCTCGCAAGAAAAGACATCCCAAGGGGAAGGGACATCATTT
ACAAAAAGACCTATTTTGAACGCAACAGGAACTTGAATGGCCTCGAATGTATCCGCGGCATGTTGTCCTGCATGCGTGAT
ATCCCGGGCCGGGAGCCCATCATCAAAATAGACGCTGATACACTGCTGATGTCCCTTGAAGAAATACGGAAATCACTGTT
TGAGCGCAGGAAACTGGCAGGGGGATATCAGTGCGCCTTTCCATTCGCCTGGTCCGGAGTATGTTATTGGGTAACGCGGA
AATTCATCAGTGATGCTCTTGATATCCTGGTAACGCGTGAATTCCCGACACGCAATCAGGATTATCCGGAGGACGTGACC
GTTTCCAGGCTGGCTCTGTACCTGTACGGCCGCAAGGGGGTTGATGTCATTGAGTTCCAGGGAGGCAAGTACCTGATCGG
CATCAGAACATGTGATTCTGGCCAGTTATCAAAGCTGGCGAAACTGGCCCGCCGCGTGTCTGCCGTTCACTGCGGACAGC
AGGATTTTTATGAGCCGATCATCCAGCAATCAGGCTGTACCATCCGGGAAGCTTGCGCCCGTATCATGTGGGAAATCCTT
CACCCGGGTGAACCGGAAGGATTCAGGCTTTGA

Upstream 100 bases:

>100_bases
ACGCCTTACGCCTGCACCGGGACGAAAACGGGAAAATCTATATCCAGCAGGGGGAATGGATTGTGACTTCCAAAATTTAT
TCACCAATAAATTAATAAAA

Downstream 100 bases:

>100_bases
ACAGATCCAGAATCATCTGGTTTTCCTCAAAACGTTTCTTTCCCGTGCCGTATGCTTTCATGATTTGTTCCGGCGTCTTT
TTCCGCGGTGCCTCCAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MNYAIFCYREDYKCLELCVGQIRRVDPDCTIYLFDDGKAPLARKDIPRGRDIIYKKTYFERNRNLNGLECIRGMLSCMRD
IPGREPIIKIDADTLLMSLEEIRKSLFERRKLAGGYQCAFPFAWSGVCYWVTRKFISDALDILVTREFPTRNQDYPEDVT
VSRLALYLYGRKGVDVIEFQGGKYLIGIRTCDSGQLSKLAKLARRVSAVHCGQQDFYEPIIQQSGCTIREACARIMWEIL
HPGEPEGFRL

Sequences:

>Translated_250_residues
MNYAIFCYREDYKCLELCVGQIRRVDPDCTIYLFDDGKAPLARKDIPRGRDIIYKKTYFERNRNLNGLECIRGMLSCMRD
IPGREPIIKIDADTLLMSLEEIRKSLFERRKLAGGYQCAFPFAWSGVCYWVTRKFISDALDILVTREFPTRNQDYPEDVT
VSRLALYLYGRKGVDVIEFQGGKYLIGIRTCDSGQLSKLAKLARRVSAVHCGQQDFYEPIIQQSGCTIREACARIMWEIL
HPGEPEGFRL
>Mature_250_residues
MNYAIFCYREDYKCLELCVGQIRRVDPDCTIYLFDDGKAPLARKDIPRGRDIIYKKTYFERNRNLNGLECIRGMLSCMRD
IPGREPIIKIDADTLLMSLEEIRKSLFERRKLAGGYQCAFPFAWSGVCYWVTRKFISDALDILVTREFPTRNQDYPEDVT
VSRLALYLYGRKGVDVIEFQGGKYLIGIRTCDSGQLSKLAKLARRVSAVHCGQQDFYEPIIQQSGCTIREACARIMWEIL
HPGEPEGFRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28913; Mature: 28913

Theoretical pI: Translated: 8.28; Mature: 8.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYAIFCYREDYKCLELCVGQIRRVDPDCTIYLFDDGKAPLARKDIPRGRDIIYKKTYFE
CCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHH
RNRNLNGLECIRGMLSCMRDIPGREPIIKIDADTLLMSLEEIRKSLFERRKLAGGYQCAF
HCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PFAWSGVCYWVTRKFISDALDILVTREFPTRNQDYPEDVTVSRLALYLYGRKGVDVIEFQ
CHHHCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
GGKYLIGIRTCDSGQLSKLAKLARRVSAVHCGQQDFYEPIIQQSGCTIREACARIMWEIL
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HPGEPEGFRL
CCCCCCCCCC
>Mature Secondary Structure
MNYAIFCYREDYKCLELCVGQIRRVDPDCTIYLFDDGKAPLARKDIPRGRDIIYKKTYFE
CCEEEEEEECCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHH
RNRNLNGLECIRGMLSCMRDIPGREPIIKIDADTLLMSLEEIRKSLFERRKLAGGYQCAF
HCCCCCHHHHHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
PFAWSGVCYWVTRKFISDALDILVTREFPTRNQDYPEDVTVSRLALYLYGRKGVDVIEFQ
CHHHCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEC
GGKYLIGIRTCDSGQLSKLAKLARRVSAVHCGQQDFYEPIIQQSGCTIREACARIMWEIL
CCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
HPGEPEGFRL
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA