Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735843

Identifier: 187735843

GI number: 187735843

Start: 1623065

End: 1623904

Strand: Direct

Name: 187735843

Synonym: Amuc_1350

Alternate gene names: NA

Gene position: 1623065-1623904 (Clockwise)

Preceding gene: 187735842

Following gene: 187735844

Centisome position: 60.92

GC content: 52.38

Gene sequence:

>840_bases
ATGATCTGGACAAACGATTTACGGATTAACACGGACATTACGCCGGATGCCGGTAGTCACCAGGCCTACGGGACATACAG
AGTGAACCGTACCGTCTCGCAATCGGAAATTGTTCCCATTGCCGGGTTCCGGCGTCCCAAATGGGCGGCCGCGTCAACCA
ATCCCAATGCTCCCGGCATGGTGGCGACGGGTTATAAAATCTCCCTGCATTCTCCGACAGCTTACAAGGTCACCGTAACG
TACTCCTATCCATCCGAAGGTGTCAAAGAGGATGAGGAGGGCAACCCATCCCCGGATGATCCGGAAGGCGGAGGTGAGGC
GAGCGAGAAATACAAAGTCAAGATCAGCGACCGTTCAAATATGACTCTTGAACCCTTGCTGAGCTATTACAAGCTGCGGA
ATCCGGACGGAAGCAGCAAATATCCGGAGGGGGATATGCTGATTCTGGCCGTTTATTTGTCCGGCGGCCTTGTCATGTGC
AGCAATGGACAGTACCGGCTGAAATGCGAAAAAGACGAAACGCCGGGACATATTCAATTGCCCGTTACGCCCATCACGCC
GTATATCACGCTCGGGTATAAAAAAATATCACAGAACAATACGGTCATCACGAAAACCTACACGGCGCGCCGTGTGGAAC
CGTCCAAGGTGGAACGCGTGGGTAAGATTGTCCAGGGCGGCGAGTTTGGAGGCGCAACGAACGTGCAAGAGTATAAGCTT
GATTACCTCTTTACCCGGTATTCCGTCCACAAAGTAGGCAATCGGGAATACGAAATTACGGAAGAATACACCCAATCCAA
CCCCGGAGGCTGGTCTGCGGACCTGTACAAAAATGGATAA

Upstream 100 bases:

>100_bases
TCGTAAAGATGGGGGAAGACAAGAATACCTATGGGCGGAACATGGAAACCACGCAATCCTTCTCCCAGATTTTAGAAGAA
GGAATTTTGATTATTGGCTC

Downstream 100 bases:

>100_bases
TATCACCAAGGGTGACCCAATTAAGGCGGATTGGGCCAATGCTCTTACAAATGCCGTCAATGCGGCCGCGCATGGCAAAA
CAGCCTTGCGCGGTGGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT
YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC
SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL
DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG

Sequences:

>Translated_279_residues
MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT
YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC
SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL
DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG
>Mature_279_residues
MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT
YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC
SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL
DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30978; Mature: 30978

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGM
CEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCE
VATGYKISLHSPTAYKVTVTYSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSN
EECCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
MTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMCSNGQYRLKCEKDETPGHIQL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEE
PVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL
EEECCCCEEEECEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEE
DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG
EEEEEEEEEEECCCCCEEEEHHHHCCCCCCEECCCCCCC
>Mature Secondary Structure
MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGM
CEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCE
VATGYKISLHSPTAYKVTVTYSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSN
EECCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC
MTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMCSNGQYRLKCEKDETPGHIQL
CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEE
PVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL
EEECCCCEEEECEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEE
DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG
EEEEEEEEEEECCCCCEEEEHHHHCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA