Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735843
Identifier: 187735843
GI number: 187735843
Start: 1623065
End: 1623904
Strand: Direct
Name: 187735843
Synonym: Amuc_1350
Alternate gene names: NA
Gene position: 1623065-1623904 (Clockwise)
Preceding gene: 187735842
Following gene: 187735844
Centisome position: 60.92
GC content: 52.38
Gene sequence:
>840_bases ATGATCTGGACAAACGATTTACGGATTAACACGGACATTACGCCGGATGCCGGTAGTCACCAGGCCTACGGGACATACAG AGTGAACCGTACCGTCTCGCAATCGGAAATTGTTCCCATTGCCGGGTTCCGGCGTCCCAAATGGGCGGCCGCGTCAACCA ATCCCAATGCTCCCGGCATGGTGGCGACGGGTTATAAAATCTCCCTGCATTCTCCGACAGCTTACAAGGTCACCGTAACG TACTCCTATCCATCCGAAGGTGTCAAAGAGGATGAGGAGGGCAACCCATCCCCGGATGATCCGGAAGGCGGAGGTGAGGC GAGCGAGAAATACAAAGTCAAGATCAGCGACCGTTCAAATATGACTCTTGAACCCTTGCTGAGCTATTACAAGCTGCGGA ATCCGGACGGAAGCAGCAAATATCCGGAGGGGGATATGCTGATTCTGGCCGTTTATTTGTCCGGCGGCCTTGTCATGTGC AGCAATGGACAGTACCGGCTGAAATGCGAAAAAGACGAAACGCCGGGACATATTCAATTGCCCGTTACGCCCATCACGCC GTATATCACGCTCGGGTATAAAAAAATATCACAGAACAATACGGTCATCACGAAAACCTACACGGCGCGCCGTGTGGAAC CGTCCAAGGTGGAACGCGTGGGTAAGATTGTCCAGGGCGGCGAGTTTGGAGGCGCAACGAACGTGCAAGAGTATAAGCTT GATTACCTCTTTACCCGGTATTCCGTCCACAAAGTAGGCAATCGGGAATACGAAATTACGGAAGAATACACCCAATCCAA CCCCGGAGGCTGGTCTGCGGACCTGTACAAAAATGGATAA
Upstream 100 bases:
>100_bases TCGTAAAGATGGGGGAAGACAAGAATACCTATGGGCGGAACATGGAAACCACGCAATCCTTCTCCCAGATTTTAGAAGAA GGAATTTTGATTATTGGCTC
Downstream 100 bases:
>100_bases TATCACCAAGGGTGACCCAATTAAGGCGGATTGGGCCAATGCTCTTACAAATGCCGTCAATGCGGCCGCGCATGGCAAAA CAGCCTTGCGCGGTGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG
Sequences:
>Translated_279_residues MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG >Mature_279_residues MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGMVATGYKISLHSPTAYKVTVT YSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSNMTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMC SNGQYRLKCEKDETPGHIQLPVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30978; Mature: 30978
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGM CEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCE VATGYKISLHSPTAYKVTVTYSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSN EECCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC MTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMCSNGQYRLKCEKDETPGHIQL CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEE PVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL EEECCCCEEEECEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEE DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG EEEEEEEEEEECCCCCEEEEHHHHCCCCCCEECCCCCCC >Mature Secondary Structure MIWTNDLRINTDITPDAGSHQAYGTYRVNRTVSQSEIVPIAGFRRPKWAAASTNPNAPGM CEECCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCEEECCCCCCCCCE VATGYKISLHSPTAYKVTVTYSYPSEGVKEDEEGNPSPDDPEGGGEASEKYKVKISDRSN EECCEEEEECCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCC MTLEPLLSYYKLRNPDGSSKYPEGDMLILAVYLSGGLVMCSNGQYRLKCEKDETPGHIQL CCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCEEEECCCCEEEEECCCCCCCEEEE PVTPITPYITLGYKKISQNNTVITKTYTARRVEPSKVERVGKIVQGGEFGGATNVQEYKL EEECCCCEEEECEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCHHHEEE DYLFTRYSVHKVGNREYEITEEYTQSNPGGWSADLYKNG EEEEEEEEEEECCCCCEEEEHHHHCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA