Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735842

Identifier: 187735842

GI number: 187735842

Start: 1622289

End: 1623068

Strand: Direct

Name: 187735842

Synonym: Amuc_1349

Alternate gene names: NA

Gene position: 1622289-1623068 (Clockwise)

Preceding gene: 187735841

Following gene: 187735843

Centisome position: 60.89

GC content: 48.85

Gene sequence:

>780_bases
ATGAACAAGGATATTAAACACACAGGCGGGTACGGATGGCAGGGAGACTTTGAAGCATCCATGTCTGATGATGGCTCCTG
GTCGGCAAGCGTTTCTTACGTGGCGCCCCCCGGGGAGAAATTCACTCCTTCTTACTCTCTGCATTGCCATGTTCCGGGCT
TCACGGATTTGACCCTGTCCGGTTACCAGCATTCACGGATGGCGGATTTGTGGAAAACGTCCTGTACCTTTAAAAAAGAC
GCTCCGCAGGAGGATGAAGAGCCTGACGATCCGGAACCCGGAGATCCGGACACATGGGACTTTGACCCCAAAGACACGAA
AACCACCTGGGAATTTACGGCCGGCGTGGCGAGCAAGAGCATCTTTGACCATCCGGATTTCAAATCCATGTTTCAGGATA
ATCCGGATCTGAAGAAAGCTTATGAAGCAATTATGTCGGGCCGCGTGGATATTGAATCATTGAAGATTGATTCCAGGCTG
AAGAGGAAAGATCCGTATGATTTCGGCCTGGGGGGTGTTAAATACTCCCAGGAACTTTCTGACTTGTTCAACAAGATCAT
TAATAAGGGAATCACTGACTATTACACAAGATCCTGCTCCTATTCCATCACGACCACGGAAGGAAAGGGGCCTGATGCCG
CCCTTCAATCATTGATTTCTGCGGGAGGCGGCAATTTCGTAAAGATGGGGGAAGACAAGAATACCTATGGGCGGAACATG
GAAACCACGCAATCCTTCTCCCAGATTTTAGAAGAAGGAATTTTGATTATTGGCTCATGA

Upstream 100 bases:

>100_bases
GCCGTGGACTCCCTCACAAAGGAAGTGCAGACTTCCAACGGATACCTCAGGACGATTGCGGAAAAGGCCGAGAAAGGCGG
TGTTGCCCTCTTTAGCTGAC

Downstream 100 bases:

>100_bases
TCTGGACAAACGATTTACGGATTAACACGGACATTACGCCGGATGCCGGTAGTCACCAGGCCTACGGGACATACAGAGTG
AACCGTACCGTCTCGCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MNKDIKHTGGYGWQGDFEASMSDDGSWSASVSYVAPPGEKFTPSYSLHCHVPGFTDLTLSGYQHSRMADLWKTSCTFKKD
APQEDEEPDDPEPGDPDTWDFDPKDTKTTWEFTAGVASKSIFDHPDFKSMFQDNPDLKKAYEAIMSGRVDIESLKIDSRL
KRKDPYDFGLGGVKYSQELSDLFNKIINKGITDYYTRSCSYSITTTEGKGPDAALQSLISAGGGNFVKMGEDKNTYGRNM
ETTQSFSQILEEGILIIGS

Sequences:

>Translated_259_residues
MNKDIKHTGGYGWQGDFEASMSDDGSWSASVSYVAPPGEKFTPSYSLHCHVPGFTDLTLSGYQHSRMADLWKTSCTFKKD
APQEDEEPDDPEPGDPDTWDFDPKDTKTTWEFTAGVASKSIFDHPDFKSMFQDNPDLKKAYEAIMSGRVDIESLKIDSRL
KRKDPYDFGLGGVKYSQELSDLFNKIINKGITDYYTRSCSYSITTTEGKGPDAALQSLISAGGGNFVKMGEDKNTYGRNM
ETTQSFSQILEEGILIIGS
>Mature_259_residues
MNKDIKHTGGYGWQGDFEASMSDDGSWSASVSYVAPPGEKFTPSYSLHCHVPGFTDLTLSGYQHSRMADLWKTSCTFKKD
APQEDEEPDDPEPGDPDTWDFDPKDTKTTWEFTAGVASKSIFDHPDFKSMFQDNPDLKKAYEAIMSGRVDIESLKIDSRL
KRKDPYDFGLGGVKYSQELSDLFNKIINKGITDYYTRSCSYSITTTEGKGPDAALQSLISAGGGNFVKMGEDKNTYGRNM
ETTQSFSQILEEGILIIGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28784; Mature: 28784

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKDIKHTGGYGWQGDFEASMSDDGSWSASVSYVAPPGEKFTPSYSLHCHVPGFTDLTLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEC
GYQHSRMADLWKTSCTFKKDAPQEDEEPDDPEPGDPDTWDFDPKDTKTTWEFTAGVASKS
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCHHHHH
IFDHPDFKSMFQDNPDLKKAYEAIMSGRVDIESLKIDSRLKRKDPYDFGLGGVKYSQELS
HCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
DLFNKIINKGITDYYTRSCSYSITTTEGKGPDAALQSLISAGGGNFVKMGEDKNTYGRNM
HHHHHHHHCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
ETTQSFSQILEEGILIIGS
HHHHHHHHHHHCCEEEECC
>Mature Secondary Structure
MNKDIKHTGGYGWQGDFEASMSDDGSWSASVSYVAPPGEKFTPSYSLHCHVPGFTDLTLS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCEEEC
GYQHSRMADLWKTSCTFKKDAPQEDEEPDDPEPGDPDTWDFDPKDTKTTWEFTAGVASKS
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHCHHHHH
IFDHPDFKSMFQDNPDLKKAYEAIMSGRVDIESLKIDSRLKRKDPYDFGLGGVKYSQELS
HCCCCCHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
DLFNKIINKGITDYYTRSCSYSITTTEGKGPDAALQSLISAGGGNFVKMGEDKNTYGRNM
HHHHHHHHCCCHHHHHCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCC
ETTQSFSQILEEGILIIGS
HHHHHHHHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA