Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735839
Identifier: 187735839
GI number: 187735839
Start: 1619620
End: 1620003
Strand: Direct
Name: 187735839
Synonym: Amuc_1346
Alternate gene names: NA
Gene position: 1619620-1620003 (Clockwise)
Preceding gene: 187735838
Following gene: 187735840
Centisome position: 60.79
GC content: 47.66
Gene sequence:
>384_bases ATGATGAAAGATGAGGAAAAAGCCTTGAAGCTCCGTCCCCTGTCTATTGGGAGCATGGAGCTGATGCAGCGGTTTAACTG TGGATTCATGGACGGGAGCATGAATCTGGGCTGCATTGTGGAATATATTTATATTCATACGGAGGATATTGAAACGCTTG AGTCCATGAGCCTTGAAGCGTTTAAGGAAGCCGTCCGAAGATTCAAATATGAATTAAGCCCTGATGAAATGCAGCGTATT TCCTCCCTGGTAGGCCTGCAGGCGCAGCAGGTGGATGAAGCCGCTTTTACTGTTGAGGACTCCAAAAAAAAACGGGAGGG GACAGGCCGGATTATTTTATCCAGGTGGTTTGGGCGATTGCGTCGAAAACGGGCTATCCCTTAA
Upstream 100 bases:
>100_bases CGTTCCAGGGATGGGGAGAAGGTCGCCTTAATTCCGGAGAATTGTCCGGAAGAGGATAAAATGGAAATCATGGGGCGTTT GAACTCTTGAGTGTTGGAAT
Downstream 100 bases:
>100_bases ATTACATTAAATATGATATTCCCTACAGCATGATCCTGCAGTTCCTGATGAGCGAGTGTGTTGCAAATGGCGTAAGCTGT TATTACACCCATGCCCGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 127
Protein sequence:
>127_residues MMKDEEKALKLRPLSIGSMELMQRFNCGFMDGSMNLGCIVEYIYIHTEDIETLESMSLEAFKEAVRRFKYELSPDEMQRI SSLVGLQAQQVDEAAFTVEDSKKKREGTGRIILSRWFGRLRRKRAIP
Sequences:
>Translated_127_residues MMKDEEKALKLRPLSIGSMELMQRFNCGFMDGSMNLGCIVEYIYIHTEDIETLESMSLEAFKEAVRRFKYELSPDEMQRI SSLVGLQAQQVDEAAFTVEDSKKKREGTGRIILSRWFGRLRRKRAIP >Mature_127_residues MMKDEEKALKLRPLSIGSMELMQRFNCGFMDGSMNLGCIVEYIYIHTEDIETLESMSLEAFKEAVRRFKYELSPDEMQRI SSLVGLQAQQVDEAAFTVEDSKKKREGTGRIILSRWFGRLRRKRAIP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14757; Mature: 14757
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKDEEKALKLRPLSIGSMELMQRFNCGFMDGSMNLGCIVEYIYIHTEDIETLESMSLEA CCCCCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH FKEAVRRFKYELSPDEMQRISSLVGLQAQQVDEAAFTVEDSKKKREGTGRIILSRWFGRL HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHH RRKRAIP HHHCCCC >Mature Secondary Structure MMKDEEKALKLRPLSIGSMELMQRFNCGFMDGSMNLGCIVEYIYIHTEDIETLESMSLEA CCCCCCHHHEECCCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH FKEAVRRFKYELSPDEMQRISSLVGLQAQQVDEAAFTVEDSKKKREGTGRIILSRWFGRL HHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHCCCCCEEHHHHHHHHH RRKRAIP HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA