Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735836
Identifier: 187735836
GI number: 187735836
Start: 1618027
End: 1618593
Strand: Direct
Name: 187735836
Synonym: Amuc_1343
Alternate gene names: NA
Gene position: 1618027-1618593 (Clockwise)
Preceding gene: 187735835
Following gene: 187735837
Centisome position: 60.73
GC content: 50.44
Gene sequence:
>567_bases ATGGATAAAACATCTCTCTTTTGCTGTTTGCTTTCCGGTCTGATGGCGTTATCGGTTAGTGCTACGTCTCCTGTTGCCAC GCAGGCTGAAGTGTCCGGGGATATTTCTCTCCGTGGTATAGCCAGACTCCTGCAGAAAAGCGATATTGTCTTAGCGGTTG TCATTTATAAGACGGTGGAAACTACCCAGGAGACGATATTCTACGCCCGCGTCATTCAGTCCCTCCGGGGAGACATTCCT GTAGAAGCCCTGGTTCAGTGGAGAGGGGCGGCGAATAATCTCCCTGTGGGCGGCTCTCCTAAAACAGAACTGTATTCGAG TTGTAATCTGAGTTATGTCCTTGCGACTTCAAAGGAGGTAGAAAAACTGCTGGGTACGCCGGAAGATTTTATTCCGGCTG ACAGCATTTATGGACTGGCTTCCTACAATTTGGGAAATGACGTCAGTTTTTTCCCGATGACGGAGAGTAACTCAGGCCGC GCCATGAAAAAGCTCCTCCGTATCGAACCGGCCAAAATTACTGAAGAATCGGAGGCGGCCCGCTTCCAGCCGGAATCCGG CGAGTAA
Upstream 100 bases:
>100_bases ACGCTGAATAATTCATAAACTTCTCTTTCACGGGGCGAATGCTGTTAGAGCGTTCGCCCCGTTTTTTGAACATAATGGGG AAAAAATAATATATACTTTT
Downstream 100 bases:
>100_bases TCCGGTTTTCTCTCTACGCTTCGATTTTATTTGAATCATCCCCGTTCATGAAATATGAGCGGGGCTTTTTTGTGGAGGAG GTTCATTCTCCTGTTTTTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MDKTSLFCCLLSGLMALSVSATSPVATQAEVSGDISLRGIARLLQKSDIVLAVVIYKTVETTQETIFYARVIQSLRGDIP VEALVQWRGAANNLPVGGSPKTELYSSCNLSYVLATSKEVEKLLGTPEDFIPADSIYGLASYNLGNDVSFFPMTESNSGR AMKKLLRIEPAKITEESEAARFQPESGE
Sequences:
>Translated_188_residues MDKTSLFCCLLSGLMALSVSATSPVATQAEVSGDISLRGIARLLQKSDIVLAVVIYKTVETTQETIFYARVIQSLRGDIP VEALVQWRGAANNLPVGGSPKTELYSSCNLSYVLATSKEVEKLLGTPEDFIPADSIYGLASYNLGNDVSFFPMTESNSGR AMKKLLRIEPAKITEESEAARFQPESGE >Mature_188_residues MDKTSLFCCLLSGLMALSVSATSPVATQAEVSGDISLRGIARLLQKSDIVLAVVIYKTVETTQETIFYARVIQSLRGDIP VEALVQWRGAANNLPVGGSPKTELYSSCNLSYVLATSKEVEKLLGTPEDFIPADSIYGLASYNLGNDVSFFPMTESNSGR AMKKLLRIEPAKITEESEAARFQPESGE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20317; Mature: 20317
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKTSLFCCLLSGLMALSVSATSPVATQAEVSGDISLRGIARLLQKSDIVLAVVIYKTVE CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEEEEHHHHH TTQETIFYARVIQSLRGDIPVEALVQWRGAANNLPVGGSPKTELYSSCNLSYVLATSKEV HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECHHHH EKLLGTPEDFIPADSIYGLASYNLGNDVSFFPMTESNSGRAMKKLLRIEPAKITEESEAA HHHHCCCHHCCCCCHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHH RFQPESGE CCCCCCCC >Mature Secondary Structure MDKTSLFCCLLSGLMALSVSATSPVATQAEVSGDISLRGIARLLQKSDIVLAVVIYKTVE CCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHHHCCEEEEEEEHHHHH TTQETIFYARVIQSLRGDIPVEALVQWRGAANNLPVGGSPKTELYSSCNLSYVLATSKEV HHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHCCCEEEEEECHHHH EKLLGTPEDFIPADSIYGLASYNLGNDVSFFPMTESNSGRAMKKLLRIEPAKITEESEAA HHHHCCCHHCCCCCHHHEEEECCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCHHH RFQPESGE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA