Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735824
Identifier: 187735824
GI number: 187735824
Start: 1608167
End: 1609486
Strand: Direct
Name: 187735824
Synonym: Amuc_1331
Alternate gene names: NA
Gene position: 1608167-1609486 (Clockwise)
Preceding gene: 187735817
Following gene: 187735825
Centisome position: 60.36
GC content: 58.18
Gene sequence:
>1320_bases ATGTCCAGCGGAATGAAGGAACGCCTGTGCCGGAGCCTGGAAAAGGTGCTGCATGCGGAAACCCGCGAATTGCCTGCCGC AGCGGGGGGAATCCTCCTGTTTTTCCTGTTGTTCCTGGCCTATTCCATGTTGCGGCCGGTCCGGGAGACGATGGGCATTG CCGGAGGCGTTCAGAATCTGCAGTGGCTTTTTACGGCTACTTTCGCCGCTTCCATAGGGGGCCAGTTTTTATTCGGATGG ATTTCCTCAAAGGTGCGGAGAAAGGCCATTCTTCCGTGGACGTACGGTTTTTTCATTCTTAACCTGGCGGTTTTTGCGGC GCTTGTGCTGGCATGCCCGGGAAATGTCTGGACGGCCCGTTTGTTTTATGTGTGGCTGTCCGTATTTAACCTGCTTACCG TTTCCGTGGCGTGGAGCGTGCTGTCGGACGTCATGAAGCCGGGGCAGATGAAACGCCTGTTTGCCCTGGTTGCCAGCGGA AGCAGCCTTGGGGCCATGGCGGGGCCGGCGGTGACGGCCGCCCTTGCCGGAGTGGCCGGCCTTTTGTGGTTGTTCCTTGC CGCCGCTGTTCTTCTGGCGCTGGCGATGCTGGCGGGAATGTACCTGCACCGCTGGCGTGACGGGAATTCCCCGGAAGATG AGGAAACGGGAGTTCTTCTTCCGGCCGATTGCCGGGAACGCCCTCTGGGAGGGAACCCGTTTGCCGGGGCGTCTGCCGTA TTCCGGTCTCCCTTCCTGATGAGCATCGGGCTGTTCATCATCCTGCTGGCCGGGACCAATACGTTCCTGTATTTTGAGCT GATGAGCGTTGTAGCGTCTTCCTTTCCTGATCCGGTGCGCCAGACGCAGGTATTCGGAGTGCTGGACGTTGTTGTTCAGG GGTGTACCATGCTGCTTCAGGTATTTCTGGCGGGACGCATTGTTCGGAAATTCGGATTGGCGGCGCTGCTGGCGGCTGTC CCCGTTCTTATTTCCCTGGGTTTTGTATGGATGGCTTTCGCTCCGGTATTTGCCGTCGTGGCCGTGGTGATGGCGGTACG CCGCATCGGGGAATACGGAATGGTGCGTCCCGGCCGTGAAATGTTGAATTCCGTATTGTCCCCGGAAGAAAAATATAAAG CCAAGAGCTTTATTGATACGGTCCTTTACCGTGGCGGCGACGCCGTCAGCGCATGGCTGAAAAGCTCCTTTAACGTGTTG GGTGCCCATTCCCCGTGGGCCATGCTGGCCGGAGCCGCCATTTCCTTTCTTTGGGCGGCCACCGGATTCCTGCTTGCGGA CAGGTTCCGGAAAATGGCCGGAGTACAGGGAAAGAAATGA
Upstream 100 bases:
>100_bases TGGAAGGAAAAGCTCCGGCAGGGAGATGAAAGAAAGGCGGATTTTTGGGGAACGGGACGATTTAAGTGAAAAAATCTTCC GGGTATGGTAAATTCCGGGC
Downstream 100 bases:
>100_bases TCCTTATGGCGGGGAATTTTCCGTTTTGTCCGGATACGGCCCGCCAGATGCGGCAATTCCTGGTGATGCCTCTTTTCAGG CGGCTGCCGCCGTCAGAGGT
Product: major facilitator superfamily MFS_1
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transmembrane Protein; MFS Family Protein; ADP/ATP Translocating Protein; Inner Membrane Protein; ADP ATP Carrier Protein; ATP/ADP Translocase-Like Protein; Facilitator Family Protein
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MSSGMKERLCRSLEKVLHAETRELPAAAGGILLFFLLFLAYSMLRPVRETMGIAGGVQNLQWLFTATFAASIGGQFLFGW ISSKVRRKAILPWTYGFFILNLAVFAALVLACPGNVWTARLFYVWLSVFNLLTVSVAWSVLSDVMKPGQMKRLFALVASG SSLGAMAGPAVTAALAGVAGLLWLFLAAAVLLALAMLAGMYLHRWRDGNSPEDEETGVLLPADCRERPLGGNPFAGASAV FRSPFLMSIGLFIILLAGTNTFLYFELMSVVASSFPDPVRQTQVFGVLDVVVQGCTMLLQVFLAGRIVRKFGLAALLAAV PVLISLGFVWMAFAPVFAVVAVVMAVRRIGEYGMVRPGREMLNSVLSPEEKYKAKSFIDTVLYRGGDAVSAWLKSSFNVL GAHSPWAMLAGAAISFLWAATGFLLADRFRKMAGVQGKK
Sequences:
>Translated_439_residues MSSGMKERLCRSLEKVLHAETRELPAAAGGILLFFLLFLAYSMLRPVRETMGIAGGVQNLQWLFTATFAASIGGQFLFGW ISSKVRRKAILPWTYGFFILNLAVFAALVLACPGNVWTARLFYVWLSVFNLLTVSVAWSVLSDVMKPGQMKRLFALVASG SSLGAMAGPAVTAALAGVAGLLWLFLAAAVLLALAMLAGMYLHRWRDGNSPEDEETGVLLPADCRERPLGGNPFAGASAV FRSPFLMSIGLFIILLAGTNTFLYFELMSVVASSFPDPVRQTQVFGVLDVVVQGCTMLLQVFLAGRIVRKFGLAALLAAV PVLISLGFVWMAFAPVFAVVAVVMAVRRIGEYGMVRPGREMLNSVLSPEEKYKAKSFIDTVLYRGGDAVSAWLKSSFNVL GAHSPWAMLAGAAISFLWAATGFLLADRFRKMAGVQGKK >Mature_438_residues SSGMKERLCRSLEKVLHAETRELPAAAGGILLFFLLFLAYSMLRPVRETMGIAGGVQNLQWLFTATFAASIGGQFLFGWI SSKVRRKAILPWTYGFFILNLAVFAALVLACPGNVWTARLFYVWLSVFNLLTVSVAWSVLSDVMKPGQMKRLFALVASGS SLGAMAGPAVTAALAGVAGLLWLFLAAAVLLALAMLAGMYLHRWRDGNSPEDEETGVLLPADCRERPLGGNPFAGASAVF RSPFLMSIGLFIILLAGTNTFLYFELMSVVASSFPDPVRQTQVFGVLDVVVQGCTMLLQVFLAGRIVRKFGLAALLAAVP VLISLGFVWMAFAPVFAVVAVVMAVRRIGEYGMVRPGREMLNSVLSPEEKYKAKSFIDTVLYRGGDAVSAWLKSSFNVLG AHSPWAMLAGAAISFLWAATGFLLADRFRKMAGVQGKK
Specific function: Unknown
COG id: COG3202
COG function: function code C; ATP/ADP translocase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47448; Mature: 47317
Theoretical pI: Translated: 10.45; Mature: 10.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSGMKERLCRSLEKVLHAETRELPAAAGGILLFFLLFLAYSMLRPVRETMGIAGGVQNL CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QWLFTATFAASIGGQFLFGWISSKVRRKAILPWTYGFFILNLAVFAALVLACPGNVWTAR HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LFYVWLSVFNLLTVSVAWSVLSDVMKPGQMKRLFALVASGSSLGAMAGPAVTAALAGVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLWLFLAAAVLLALAMLAGMYLHRWRDGNSPEDEETGVLLPADCRERPLGGNPFAGASAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHH FRSPFLMSIGLFIILLAGTNTFLYFELMSVVASSFPDPVRQTQVFGVLDVVVQGCTMLLQ HHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VFLAGRIVRKFGLAALLAAVPVLISLGFVWMAFAPVFAVVAVVMAVRRIGEYGMVRPGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH MLNSVLSPEEKYKAKSFIDTVLYRGGDAVSAWLKSSFNVLGAHSPWAMLAGAAISFLWAA HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TGFLLADRFRKMAGVQGKK HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure SSGMKERLCRSLEKVLHAETRELPAAAGGILLFFLLFLAYSMLRPVRETMGIAGGVQNL CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH QWLFTATFAASIGGQFLFGWISSKVRRKAILPWTYGFFILNLAVFAALVLACPGNVWTAR HHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHH LFYVWLSVFNLLTVSVAWSVLSDVMKPGQMKRLFALVASGSSLGAMAGPAVTAALAGVAG HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LLWLFLAAAVLLALAMLAGMYLHRWRDGNSPEDEETGVLLPADCRERPLGGNPFAGASAV HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHH FRSPFLMSIGLFIILLAGTNTFLYFELMSVVASSFPDPVRQTQVFGVLDVVVQGCTMLLQ HHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VFLAGRIVRKFGLAALLAAVPVLISLGFVWMAFAPVFAVVAVVMAVRRIGEYGMVRPGRE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH MLNSVLSPEEKYKAKSFIDTVLYRGGDAVSAWLKSSFNVLGAHSPWAMLAGAAISFLWAA HHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH TGFLLADRFRKMAGVQGKK HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA