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The map label for this gene is msrB [H]

Identifier: 187735822

GI number: 187735822

Start: 1606275

End: 1606721

Strand: Reverse

Name: msrB [H]

Synonym: Amuc_1329

Alternate gene names: 187735822

Gene position: 1606721-1606275 (Counterclockwise)

Preceding gene: 187735823

Following gene: 187735821

Centisome position: 60.31

GC content: 62.19

Gene sequence:

>447_bases
ATGGCCGTGAATGGAGGGATTCCCGCCTCCCGGGACGTACCCGATCCCGGCCCTGCCCGCACGCGCCGCCCCCTCACGGA
AACGGAAAAACGCATTATCGAACACCAGGGAACGGAACCGCCCTTTTCCGGGGAATTCGTCAGCTTCTTTGAGCCGGGCA
TCTATTCCTGCCGCAAATGCGGTGCGCCTCTGTTCCGGTCGGAAGACAAATTCGATGCCGGATGCGGCTGGCCCTGTTTT
GATGATTCCCTGCCGGACGCCGTCACAAGCGTCCATGCGGGCGGCGGGCGGCGCACGGAAATCACCTGCGCCCGCTGCGG
AGGCCATCTGGGACACATTTTCAATGGAGAACGCCTGACTCCGAAGAATCTGCGCTACTGCGTCAATTCCCTTTCCCTGG
AATTCCGGGCAGCCCCTCTTCCGATAGCGGCGGATGCCCCCCGTTAA

Upstream 100 bases:

>100_bases
CAAAACCCGCTCCAACCTGGTCATAAGCCATATGAATCAGGAAGAACGGAGACACTGGGCGTCATGGATAGGCATGATTG
CGGAAGGCGTGGCTGGAGTC

Downstream 100 bases:

>100_bases
AGGCGTGCGGCAGGAAAAAAATATCCGGCCGCCCTTCCATGCGCTGCCGGATGCGGCCGCCGCGGCGGAATTTACCCTGA
AATCCGTTCACGGCCCCGGA

Product: Methionine sulfoxide reductase B

Products: NA

Alternate protein names: Peptide-methionine (R)-S-oxide reductase [H]

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MAVNGGIPASRDVPDPGPARTRRPLTETEKRIIEHQGTEPPFSGEFVSFFEPGIYSCRKCGAPLFRSEDKFDAGCGWPCF
DDSLPDAVTSVHAGGGRRTEITCARCGGHLGHIFNGERLTPKNLRYCVNSLSLEFRAAPLPIAADAPR

Sequences:

>Translated_148_residues
MAVNGGIPASRDVPDPGPARTRRPLTETEKRIIEHQGTEPPFSGEFVSFFEPGIYSCRKCGAPLFRSEDKFDAGCGWPCF
DDSLPDAVTSVHAGGGRRTEITCARCGGHLGHIFNGERLTPKNLRYCVNSLSLEFRAAPLPIAADAPR
>Mature_147_residues
AVNGGIPASRDVPDPGPARTRRPLTETEKRIIEHQGTEPPFSGEFVSFFEPGIYSCRKCGAPLFRSEDKFDAGCGWPCFD
DSLPDAVTSVHAGGGRRTEITCARCGGHLGHIFNGERLTPKNLRYCVNSLSLEFRAAPLPIAADAPR

Specific function: Unknown

COG id: COG0229

COG function: function code O; Conserved domain frequently associated with peptide methionine sulfoxide reductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the msrB Met sulfoxide reductase family [H]

Homologues:

Organism=Homo sapiens, GI301336164, Length=121, Percent_Identity=45.4545454545455, Blast_Score=106, Evalue=9e-24,
Organism=Homo sapiens, GI301336162, Length=121, Percent_Identity=45.4545454545455, Blast_Score=106, Evalue=9e-24,
Organism=Homo sapiens, GI73089054, Length=121, Percent_Identity=45.4545454545455, Blast_Score=106, Evalue=9e-24,
Organism=Homo sapiens, GI37620216, Length=121, Percent_Identity=45.4545454545455, Blast_Score=105, Evalue=1e-23,
Organism=Homo sapiens, GI117606353, Length=125, Percent_Identity=36.8, Blast_Score=87, Evalue=4e-18,
Organism=Escherichia coli, GI1788077, Length=124, Percent_Identity=39.5161290322581, Blast_Score=96, Evalue=7e-22,
Organism=Caenorhabditis elegans, GI17553450, Length=133, Percent_Identity=36.0902255639098, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI115532676, Length=133, Percent_Identity=36.0902255639098, Blast_Score=91, Evalue=2e-19,
Organism=Saccharomyces cerevisiae, GI6319816, Length=120, Percent_Identity=40.8333333333333, Blast_Score=98, Evalue=4e-22,
Organism=Drosophila melanogaster, GI221378664, Length=128, Percent_Identity=39.84375, Blast_Score=109, Evalue=6e-25,
Organism=Drosophila melanogaster, GI221378662, Length=135, Percent_Identity=37.7777777777778, Blast_Score=107, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24645799, Length=119, Percent_Identity=42.8571428571429, Blast_Score=106, Evalue=5e-24,
Organism=Drosophila melanogaster, GI45553335, Length=122, Percent_Identity=42.6229508196721, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI21356369, Length=122, Percent_Identity=42.6229508196721, Blast_Score=106, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24645801, Length=130, Percent_Identity=40.7692307692308, Blast_Score=102, Evalue=7e-23,
Organism=Drosophila melanogaster, GI24645804, Length=133, Percent_Identity=40.6015037593985, Blast_Score=102, Evalue=8e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002579
- InterPro:   IPR011057 [H]

Pfam domain/function: PF01641 SelR [H]

EC number: =1.8.4.12 [H]

Molecular weight: Translated: 16044; Mature: 15913

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVNGGIPASRDVPDPGPARTRRPLTETEKRIIEHQGTEPPFSGEFVSFFEPGIYSCRKC
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHC
GAPLFRSEDKFDAGCGWPCFDDSLPDAVTSVHAGGGRRTEITCARCGGHLGHIFNGERLT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCC
PKNLRYCVNSLSLEFRAAPLPIAADAPR
HHHHHHHHHHHCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
AVNGGIPASRDVPDPGPARTRRPLTETEKRIIEHQGTEPPFSGEFVSFFEPGIYSCRKC
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCHHHHHHHC
GAPLFRSEDKFDAGCGWPCFDDSLPDAVTSVHAGGGRRTEITCARCGGHLGHIFNGERLT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEHHHCCCCCCCCCCCCCCC
PKNLRYCVNSLSLEFRAAPLPIAADAPR
HHHHHHHHHHHCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA