Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is tauC [C]
Identifier: 187735788
GI number: 187735788
Start: 1571338
End: 1572117
Strand: Reverse
Name: tauC [C]
Synonym: Amuc_1295
Alternate gene names: 187735788
Gene position: 1572117-1571338 (Counterclockwise)
Preceding gene: 187735789
Following gene: 187735787
Centisome position: 59.01
GC content: 50.64
Gene sequence:
>780_bases ATGCATTCTTCCATAAAAAGCATCATCCAATCCTCAGTATTCATCTTTCTAGCTATAGCTATATGGGAATACGGGTCTCT GTCCGGCTGGTGGAGGCCTTTCCTATTCCCGGCACCTTCCACCATAAGCGGCTATCTTGAAGAAGCAATCAGGGACAACT CTCTCTGGTCCGCTACGTTCGTTACCATTAGGAGACTGTTCCTGGGGTACCTGGCAGGAATCTCCATCGGGATTCCAGCA GGACTTTTATCTGCCCGTTTCCAAATAATAAGAAACACCATCGGAGTTCTGGCACTGGGATTTCAAGGGCTTCCCAGCGT TTGCTGGGTCCCTCTGGCCATCCTATGGTTCGGTCAGGAAGAAGCGGCCATCTTGTTCGTTGTCATCATGGGTACTGTCT GGTCAGTCATACTGGCCACAGAAAATGGACTTGCCAACATCCCTCCAATTTATGCTCGCGCAGCTCGGACAATGGGAGCC GGTTCTGCCTACACGCTGCTCTTCGTCACGCTTCCGGCCTCTGCACCATTCATCGTCAGCGGCATGAAGCAAGGTTGGGC CTTCTCCTGGCGCTCCCTGATGTCCGCAGAAATTTTTGTTCCCATCCTGACAGGATTGGGATTGGGACAGCTCCTGCACT TCGGAAGAGAACTCAATTCCATGGAGCAGGTCATGGGAATCATGTTCGTTATTATTCTCTTAGGCCTGCTCTCAGATAAA CTCATCTTCTCCCCCCTGGAACAATCTATCTACAAACGCTGGGGGACAAATCTAGCTTAA
Upstream 100 bases:
>100_bases AAATCAATGATCCGGGAGTAGCCCGGCTATCCTCAAACATCACACGTGCATTAAAATTGGTTTCCAGAACCGCAGAAGAA AAACAAGACACACAGACATC
Downstream 100 bases:
>100_bases CCCACAGAAAATATTATGATTAAAGAAGGATACACATCCAACGAACGAATCAAGGAGGAAAGCGATTTCCTCAGAGGGAA TATCTCTAACCTCCTCCATG
Product: binding-protein-dependent transporters inner membrane component
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MHSSIKSIIQSSVFIFLAIAIWEYGSLSGWWRPFLFPAPSTISGYLEEAIRDNSLWSATFVTIRRLFLGYLAGISIGIPA GLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFGQEEAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGA GSAYTLLFVTLPASAPFIVSGMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHFGRELNSMEQVMGIMFVIILLGLLSDK LIFSPLEQSIYKRWGTNLA
Sequences:
>Translated_259_residues MHSSIKSIIQSSVFIFLAIAIWEYGSLSGWWRPFLFPAPSTISGYLEEAIRDNSLWSATFVTIRRLFLGYLAGISIGIPA GLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFGQEEAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGA GSAYTLLFVTLPASAPFIVSGMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHFGRELNSMEQVMGIMFVIILLGLLSDK LIFSPLEQSIYKRWGTNLA >Mature_259_residues MHSSIKSIIQSSVFIFLAIAIWEYGSLSGWWRPFLFPAPSTISGYLEEAIRDNSLWSATFVTIRRLFLGYLAGISIGIPA GLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFGQEEAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGA GSAYTLLFVTLPASAPFIVSGMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHFGRELNSMEQVMGIMFVIILLGLLSDK LIFSPLEQSIYKRWGTNLA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=212, Percent_Identity=24.5283018867925, Blast_Score=78, Evalue=4e-16, Organism=Escherichia coli, GI87081802, Length=248, Percent_Identity=26.6129032258064, Blast_Score=74, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 28410; Mature: 28410
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSSIKSIIQSSVFIFLAIAIWEYGSLSGWWRPFLFPAPSTISGYLEEAIRDNSLWSATF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH VTIRRLFLGYLAGISIGIPAGLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFGQE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC EAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGAGSAYTLLFVTLPASAPFIVS CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHH GMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHFGRELNSMEQVMGIMFVIILLGLLSDK HHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFSPLEQSIYKRWGTNLA HHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MHSSIKSIIQSSVFIFLAIAIWEYGSLSGWWRPFLFPAPSTISGYLEEAIRDNSLWSATF CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHH VTIRRLFLGYLAGISIGIPAGLLSARFQIIRNTIGVLALGFQGLPSVCWVPLAILWFGQE HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC EAAILFVVIMGTVWSVILATENGLANIPPIYARAARTMGAGSAYTLLFVTLPASAPFIVS CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEEECCCCCHHHH GMKQGWAFSWRSLMSAEIFVPILTGLGLGQLLHFGRELNSMEQVMGIMFVIILLGLLSDK HHHHCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIFSPLEQSIYKRWGTNLA HHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]