Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735786
Identifier: 187735786
GI number: 187735786
Start: 1569066
End: 1569449
Strand: Direct
Name: 187735786
Synonym: Amuc_1293
Alternate gene names: NA
Gene position: 1569066-1569449 (Clockwise)
Preceding gene: 187735785
Following gene: 187735800
Centisome position: 58.9
GC content: 56.25
Gene sequence:
>384_bases ATGACTTATCGCCTTAATACGGACCGTCTGGTTTTTTTTTCCGTGCTGTTGTGGGTGCTGTTGCCGCCGGGTGTTTTTGC CTGGGAAGGGAATCCTCCGGGTCCGGATAATGTGCGGTGGCTGGAGCAGTTCTGTTCCAGCTACATGCAGTTTCTGACCC TGGGCGGCGTGTTGTGCGCGGTTATTGGTTTTGTGTGCGCCGCCCTGGTCTGGCTGGTGCATCGTCTGGACTGGGCGCGG AGCTTGAAAATCAGCGTGCTGTTTGTCATGTCCATCCTGTGCCTGGTTTTGTATGGCGGCTCCCTTTCCTTTGCCGTGTT TTATCTTCCCCTGGCCCTGATTAACCCCGCCGTGTATTGTTTCAGCGTCGGCCGGGCGGAATGA
Upstream 100 bases:
>100_bases TCCGCCTTTGCCCCCTTGTAAACCCTGCCGTTCCCGGAACCGCGGCGCACGGGCGATTTCCCTTGTTATCCCGTGCACGG AAATGGTATCATGAAAGCGC
Downstream 100 bases:
>100_bases GCGGAGGGAGATTTGAAGGAAGATTCTAAAGGTCTTTAATAAAAATATTATGCCGTTGCGGCAGAGATGGGCTGAATGAG AGTTCCTGGCGGCGACGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MTYRLNTDRLVFFSVLLWVLLPPGVFAWEGNPPGPDNVRWLEQFCSSYMQFLTLGGVLCAVIGFVCAALVWLVHRLDWAR SLKISVLFVMSILCLVLYGGSLSFAVFYLPLALINPAVYCFSVGRAE
Sequences:
>Translated_127_residues MTYRLNTDRLVFFSVLLWVLLPPGVFAWEGNPPGPDNVRWLEQFCSSYMQFLTLGGVLCAVIGFVCAALVWLVHRLDWAR SLKISVLFVMSILCLVLYGGSLSFAVFYLPLALINPAVYCFSVGRAE >Mature_126_residues TYRLNTDRLVFFSVLLWVLLPPGVFAWEGNPPGPDNVRWLEQFCSSYMQFLTLGGVLCAVIGFVCAALVWLVHRLDWARS LKISVLFVMSILCLVLYGGSLSFAVFYLPLALINPAVYCFSVGRAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14242; Mature: 14111
Theoretical pI: Translated: 7.83; Mature: 7.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYRLNTDRLVFFSVLLWVLLPPGVFAWEGNPPGPDNVRWLEQFCSSYMQFLTLGGVLCA CCEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VIGFVCAALVWLVHRLDWARSLKISVLFVMSILCLVLYGGSLSFAVFYLPLALINPAVYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FSVGRAE HHCCCCC >Mature Secondary Structure TYRLNTDRLVFFSVLLWVLLPPGVFAWEGNPPGPDNVRWLEQFCSSYMQFLTLGGVLCA CEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VIGFVCAALVWLVHRLDWARSLKISVLFVMSILCLVLYGGSLSFAVFYLPLALINPAVYC HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH FSVGRAE HHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA