Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yaeI [H]
Identifier: 187735773
GI number: 187735773
Start: 1541420
End: 1542271
Strand: Reverse
Name: yaeI [H]
Synonym: Amuc_1279
Alternate gene names: 187735773
Gene position: 1542271-1541420 (Counterclockwise)
Preceding gene: 187735774
Following gene: 187735772
Centisome position: 57.89
GC content: 56.34
Gene sequence:
>852_bases ATGACCACCCACCCTTTCTCCAAAAAGCGTTCCCAGCTTCGCAAGCTCCTGTATGCGGCCGCGGCTGTCATTCTGCTGGG GTCCCTACTGGCCTCCTACATGCATTGGGAAGCCAATCATCTGGAATTTAATGAAAACACGGCCCCTGCCGGATGTGTAC CCGACCTTTCCGGCCTTCGTATCCTGGTATTGTCGGATATCCACACCAATCTGCCTCTGCTGGAAAAAGCGGCAACAATA GCGGAACAGGCCAGACCGGACATGATCGTATTTCTGGGAGATCTGTACACGGATTTTCTGCGGGTCACTCATGCAGGCGA CTACATCACCCAGATGAAACGCCTCTCCTCCGTCGCCCCGGCCTACGCATGTCTGGGCAACCATGACATGGCCCTTGCGG ACAATGTGGAACGCGTCCTGAAGGAAGGGGGCTTCACACTGCTCAGGAATTCCGCCGCCTTCGTCTCCATCCCCAGGCTG GGAAATGTGGAATTCAAACTGGTGGGGCTGGGAGACCTGCGGGAGGGTGACTTTTTCCCGGACCGGTGCATGAGCCCGCG CGAATTGGAGGAAAACTCGCCCATGCCAACCATCGTCCTGAGCCACAACCCCAAAGGAAGGGAATTGCTGGGAAATTACC GCTGGGACCTGATGCTCTCCGGCCATACGCATGGAGGCCAAATCAAACTGCCTTTCTTTTCCACCCCGCTATTGGCGTCG GAAGGGGAAACCATGTACTCCGGGTTCCATCCTTATGAGGACAAGCAGGTATTCGTCACCCGCGGCATAGGCTATATAGG GCCGGGCCGCTTCAACTGCCCGCCGGAAATCAACCTCATAACCATTCCCTAA
Upstream 100 bases:
>100_bases AAGCGGCCGGGGGCGGAGATATTTACCTGGACGGGAAGCTGGTGCGCCGCAACGGATTATTCACCCTGCCGGAACTGGCC ATTCTCAACCCCTCCCTATC
Downstream 100 bases:
>100_bases CTTCCCGACCTGACCGCCATGGTTCTCTCTCTGCTGGCCTCCGGAGGTCCTAATGACGCGCCTCCATTCTTCATTCTGCT TACTGTCGTCTTCATGGGAA
Product: phosphodiesterase YaeI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MTTHPFSKKRSQLRKLLYAAAAVILLGSLLASYMHWEANHLEFNENTAPAGCVPDLSGLRILVLSDIHTNLPLLEKAATI AEQARPDMIVFLGDLYTDFLRVTHAGDYITQMKRLSSVAPAYACLGNHDMALADNVERVLKEGGFTLLRNSAAFVSIPRL GNVEFKLVGLGDLREGDFFPDRCMSPRELEENSPMPTIVLSHNPKGRELLGNYRWDLMLSGHTHGGQIKLPFFSTPLLAS EGETMYSGFHPYEDKQVFVTRGIGYIGPGRFNCPPEINLITIP
Sequences:
>Translated_283_residues MTTHPFSKKRSQLRKLLYAAAAVILLGSLLASYMHWEANHLEFNENTAPAGCVPDLSGLRILVLSDIHTNLPLLEKAATI AEQARPDMIVFLGDLYTDFLRVTHAGDYITQMKRLSSVAPAYACLGNHDMALADNVERVLKEGGFTLLRNSAAFVSIPRL GNVEFKLVGLGDLREGDFFPDRCMSPRELEENSPMPTIVLSHNPKGRELLGNYRWDLMLSGHTHGGQIKLPFFSTPLLAS EGETMYSGFHPYEDKQVFVTRGIGYIGPGRFNCPPEINLITIP >Mature_282_residues TTHPFSKKRSQLRKLLYAAAAVILLGSLLASYMHWEANHLEFNENTAPAGCVPDLSGLRILVLSDIHTNLPLLEKAATIA EQARPDMIVFLGDLYTDFLRVTHAGDYITQMKRLSSVAPAYACLGNHDMALADNVERVLKEGGFTLLRNSAAFVSIPRLG NVEFKLVGLGDLREGDFFPDRCMSPRELEENSPMPTIVLSHNPKGRELLGNYRWDLMLSGHTHGGQIKLPFFSTPLLASE GETMYSGFHPYEDKQVFVTRGIGYIGPGRFNCPPEINLITIP
Specific function: Shows phosphodiesterase activity, hydrolyzing phosphodiester bond in the artificial chromogenic substrate bis-p- nitrophenyl phosphate (bis-pNPP) [H]
COG id: COG1408
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallophosphoesterase superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081695, Length=286, Percent_Identity=32.5174825174825, Blast_Score=145, Evalue=2e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 31400; Mature: 31268
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTHPFSKKRSQLRKLLYAAAAVILLGSLLASYMHWEANHLEFNENTAPAGCVPDLSGLR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCE ILVLSDIHTNLPLLEKAATIAEQARPDMIVFLGDLYTDFLRVTHAGDYITQMKRLSSVAP EEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCC AYACLGNHDMALADNVERVLKEGGFTLLRNSAAFVSIPRLGNVEFKLVGLGDLREGDFFP HHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCH DRCMSPRELEENSPMPTIVLSHNPKGRELLGNYRWDLMLSGHTHGGQIKLPFFSTPLLAS HHCCCCHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCC EGETMYSGFHPYEDKQVFVTRGIGYIGPGRFNCPPEINLITIP CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECC >Mature Secondary Structure TTHPFSKKRSQLRKLLYAAAAVILLGSLLASYMHWEANHLEFNENTAPAGCVPDLSGLR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCCE ILVLSDIHTNLPLLEKAATIAEQARPDMIVFLGDLYTDFLRVTHAGDYITQMKRLSSVAP EEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCC AYACLGNHDMALADNVERVLKEGGFTLLRNSAAFVSIPRLGNVEFKLVGLGDLREGDFFP HHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCEEEEEEECCCCCCCCCCH DRCMSPRELEENSPMPTIVLSHNPKGRELLGNYRWDLMLSGHTHGGQIKLPFFSTPLLAS HHCCCCHHHHCCCCCCEEEEECCCCCHHHHCCCEEEEEEECCCCCCEEEECCCCCCCCCC EGETMYSGFHPYEDKQVFVTRGIGYIGPGRFNCPPEINLITIP CCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8202364; 9278503 [H]