Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is yidD [C]

Identifier: 187735749

GI number: 187735749

Start: 1514755

End: 1515003

Strand: Reverse

Name: yidD [C]

Synonym: Amuc_1255

Alternate gene names: 187735749

Gene position: 1515003-1514755 (Counterclockwise)

Preceding gene: 187735750

Following gene: 187735748

Centisome position: 56.87

GC content: 59.84

Gene sequence:

>249_bases
ATGATGAAATGGCTGCTCATCACCCTTGTGAAGGGATACCAAACCTTCATCAGCGCTCCCCTGCATGCCCTGGGAGGGCC
CGGGAGCGGCTGCCGCTATACACCCACTTGTTCCCAGTACTTCATCCAGGCCGTTCACATCCACGGAGCCTGGCGCGGCT
TTCTTCTTGGCACATGGCGTATTTTAAGATGCAACCCGTGGGGCGGATCAGGTTATGATCCCGTGCCCCCGGCGCGCCAC
CCACGCTGA

Upstream 100 bases:

>100_bases
GGAGGGCCGTGGAAGCCAGCTACGCCGACCTGGAACGGGACTGGCGGAAAGCCGCCCGAAAACTTAAATTGCAACTTCTT
TCCCGGGAACAAGACAAGAC

Downstream 100 bases:

>100_bases
ACAATTACCTTTCTTTCCCTTTCCTTTCACCAACTCCAATCAAGCTATATCACATTATGGATCGCACAGCATGGATCATC
ATAGGCATCTGCGCCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH
PR

Sequences:

>Translated_82_residues
MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH
PR
>Mature_82_residues
MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH
PR

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002696
- ProDom:   PD004225 [H]

Pfam domain/function: PF01809 DUF37 [H]

EC number: NA

Molecular weight: Translated: 9167; Mature: 9167

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWR
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE
ILRCNPWGGSGYDPVPPARHPR
EEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWR
CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE
ILRCNPWGGSGYDPVPPARHPR
EEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA