Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yidD [C]
Identifier: 187735749
GI number: 187735749
Start: 1514755
End: 1515003
Strand: Reverse
Name: yidD [C]
Synonym: Amuc_1255
Alternate gene names: 187735749
Gene position: 1515003-1514755 (Counterclockwise)
Preceding gene: 187735750
Following gene: 187735748
Centisome position: 56.87
GC content: 59.84
Gene sequence:
>249_bases ATGATGAAATGGCTGCTCATCACCCTTGTGAAGGGATACCAAACCTTCATCAGCGCTCCCCTGCATGCCCTGGGAGGGCC CGGGAGCGGCTGCCGCTATACACCCACTTGTTCCCAGTACTTCATCCAGGCCGTTCACATCCACGGAGCCTGGCGCGGCT TTCTTCTTGGCACATGGCGTATTTTAAGATGCAACCCGTGGGGCGGATCAGGTTATGATCCCGTGCCCCCGGCGCGCCAC CCACGCTGA
Upstream 100 bases:
>100_bases GGAGGGCCGTGGAAGCCAGCTACGCCGACCTGGAACGGGACTGGCGGAAAGCCGCCCGAAAACTTAAATTGCAACTTCTT TCCCGGGAACAAGACAAGAC
Downstream 100 bases:
>100_bases ACAATTACCTTTCTTTCCCTTTCCTTTCACCAACTCCAATCAAGCTATATCACATTATGGATCGCACAGCATGGATCATC ATAGGCATCTGCGCCGCCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH PR
Sequences:
>Translated_82_residues MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH PR >Mature_82_residues MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWRILRCNPWGGSGYDPVPPARH PR
Specific function: Unknown
COG id: COG0759
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0161 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002696 - ProDom: PD004225 [H]
Pfam domain/function: PF01809 DUF37 [H]
EC number: NA
Molecular weight: Translated: 9167; Mature: 9167
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWR CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE ILRCNPWGGSGYDPVPPARHPR EEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MMKWLLITLVKGYQTFISAPLHALGGPGSGCRYTPTCSQYFIQAVHIHGAWRGFLLGTWR CCHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEEEE ILRCNPWGGSGYDPVPPARHPR EEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA