Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is glnA [H]
Identifier: 187735746
GI number: 187735746
Start: 1505048
End: 1507183
Strand: Reverse
Name: glnA [H]
Synonym: Amuc_1252
Alternate gene names: 187735746
Gene position: 1507183-1505048 (Counterclockwise)
Preceding gene: 187735748
Following gene: 187735745
Centisome position: 56.57
GC content: 58.47
Gene sequence:
>2136_bases ATGATGAGTGACTCGACACGAACACAAGCCATCAGCGCCATCGCTTCCCTGCCCGTGGGCGGAGCAAGCGAGAGCGCTCC GGTCAGCATTGATTATTACGGAGCGGATGTCTTCAGCACGGAAGTGATGAAGAAGTACCTGCCAAAAGACACGGCAAAAA CCCTCCTGGCCACTATCCAGGACGGGCTTCCGCTGAACGCGGATATTGCCGCGGATGTAGCCCACGCCATGAAGCAGTGG GCTCTGGAACGGGGAGCCACTCACTATACGCACTGGTTCCAGCCCATGACGGGCTCCACGGCGGAGAAGCACGATTCCTT CCTGGATCCCAAGGGAATGGAACCCATCATGAGCTTTTCCGGCAAAAACCTGATTGTGAGCGAACCGGACGCCTCCAGCT TCCCCTCCGGCGGCTTGCGCTGCACCTTTGAGGCCCGCGGCTACACCGCATGGGACCCCACCAGCCCCGCCTTTATCAAG AGGCACGGGAACGGAGCCACGCTCTGCATCCCTACCGCCTACTGTTCTTATACGGGAGACGCTCTGGATAAGAAGACTCC GCTGCTGCGCTCCCGCCAGGCATTGGGCAATGCCGTCAAGAAGCTGATGAAGAGTTTCGGCCTTCCGGATGAACACGTGA CCATTACGCTGGGGCCTGAACAGGAATACTTCCTCATTGACAAGAACTTCTACCTGAACCGCCCGGACCTGGTCCAGACG GGTCGCACCCTTTTCGGCGCCCCTCCCGCCAAGCACCAGCAGCTGGAAGACCATTATTTCGGCTCCATCAAGCCCCGTAT CCTTAATTTCATGAGCGACGTGGAACAGGAACTCTGGAGACTGGGAATCCCGGCCAAGACCCGCCACAACGAAGTGGCGC CCGCGCAGTTTGAACTGGCTCCTTTGTTTGAGGACGTGAACCTGGCGATTGACCACAACATGCTGGTGATGGAAGTTTTG CGCCAGCAGGCCAGCAAGCACGGCCTGGTATGCCTGCTTCATGAAAAGCCCTTCGCAGGCGTCAACGGTTCCGGCAAGCA TAACAACTGGTCCATTTCCTACGGGAACAAAAACCTGCTGGACCCCGGTTCGGACCCGCAGCAGAACGCCATTTTCCTGA CCGTCCTGACCGCCATCATCGAGGCCGTTGACAAGCACAGCGACCTGCTGCGCAATTCCGTGGCCAGCGCCGGGAACGAC CACCGCCTGGGAGCAAACGAAGCGCCTCCCGCCATTATCTCCATCTTCCTGGGCGCCCAGCTCAATGAAGTGATTGAGAA TATGATCAACGGCTCTTCCGGCTGCGGCAAGCGCAACGATACGCTCAAGATCGGCGTAGACACGCTTCCCGTTCTTCCCC GGGATGCGACGGACCGCAACCGCACCAGCCCGTTTGCCTTCACCGGCAACAAGTTTGAATTCCGTGCTCCGGGCTCCTCC CAATCCTGCGCGGGCCCCATGATGACCCTGAACACCATTGTGGCGGAATCCCTTGATTCCCTGGCGGAAGAACTTTCCTC CTTCGCTCCGGAAACATTCCTGCCGCAGCTCCAGGAAACGCTCAAGCGCAGGATTTCCGAACACAAGAGAATCATCTTCA ACGGGGACAATTATTCGGAAGAATGGGTGAAAGAAGCGGAACGCCGCGGCCTCCCCAATCTGAAAAATACGATGACGGCT CTTCACACCCTGGTGAATGAAAAGAATGTGGCCCTGTTTGAAAAGTACGGCGTCTTTTCCAGGCGGGAGCTGGAATCCAG GTTTGAGATTTTCCTGGAAGAATACCACAGACGCATCCGCATTGAAGGGCGCCTGTCCTGGGAAATGGCGGCCACCATCA TCCTCCCCGCCCTGCGCAACGAATACGGGCAAACCGTTGCCGCGCTCTCCAGGGCGCTGGAAGCCAGGCGGACCAACGGT ACCGCCGCCCTGCAGAAGCTGGCGGACAAGCTGGGCGACGCCCTGGATTCCATCGTATCCGACCTGGATACCCTGGAGAC GGCGCTTACGAGCTGCCATGAGGACATCCTTGCCGCGATGTCCCGATTGAGAACCAGCGTCGATGCCGCAGAAACCCTGG TGAACGACCGGTCCTGGCCTCTCCCCAAGTACCGGGAAATGCTGTTCATCTATTAG
Upstream 100 bases:
>100_bases AACTAATAATCAATATATTAAAATGAACAACACATTCATGCGAAAGTTTACCTGAAAAGTTGGCACGCTTCTTGCTGGAG AAAAGGCACAACAGTTAACC
Downstream 100 bases:
>100_bases TGGGTGCACCGACGAGCTCCGGAGTTGTGCCGCCCCCTCGCGGGTCAAGCCTCTGCCCGCAGGGAAGGCACGGCTCCGGA GCCTTGGCGCGCCTTGTTCC
Product: glutamine synthetase catalytic region
Products: NA
Alternate protein names: GS; Glutamate--ammonia ligase [H]
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MMSDSTRTQAISAIASLPVGGASESAPVSIDYYGADVFSTEVMKKYLPKDTAKTLLATIQDGLPLNADIAADVAHAMKQW ALERGATHYTHWFQPMTGSTAEKHDSFLDPKGMEPIMSFSGKNLIVSEPDASSFPSGGLRCTFEARGYTAWDPTSPAFIK RHGNGATLCIPTAYCSYTGDALDKKTPLLRSRQALGNAVKKLMKSFGLPDEHVTITLGPEQEYFLIDKNFYLNRPDLVQT GRTLFGAPPAKHQQLEDHYFGSIKPRILNFMSDVEQELWRLGIPAKTRHNEVAPAQFELAPLFEDVNLAIDHNMLVMEVL RQQASKHGLVCLLHEKPFAGVNGSGKHNNWSISYGNKNLLDPGSDPQQNAIFLTVLTAIIEAVDKHSDLLRNSVASAGND HRLGANEAPPAIISIFLGAQLNEVIENMINGSSGCGKRNDTLKIGVDTLPVLPRDATDRNRTSPFAFTGNKFEFRAPGSS QSCAGPMMTLNTIVAESLDSLAEELSSFAPETFLPQLQETLKRRISEHKRIIFNGDNYSEEWVKEAERRGLPNLKNTMTA LHTLVNEKNVALFEKYGVFSRRELESRFEIFLEEYHRRIRIEGRLSWEMAATIILPALRNEYGQTVAALSRALEARRTNG TAALQKLADKLGDALDSIVSDLDTLETALTSCHEDILAAMSRLRTSVDAAETLVNDRSWPLPKYREMLFIY
Sequences:
>Translated_711_residues MMSDSTRTQAISAIASLPVGGASESAPVSIDYYGADVFSTEVMKKYLPKDTAKTLLATIQDGLPLNADIAADVAHAMKQW ALERGATHYTHWFQPMTGSTAEKHDSFLDPKGMEPIMSFSGKNLIVSEPDASSFPSGGLRCTFEARGYTAWDPTSPAFIK RHGNGATLCIPTAYCSYTGDALDKKTPLLRSRQALGNAVKKLMKSFGLPDEHVTITLGPEQEYFLIDKNFYLNRPDLVQT GRTLFGAPPAKHQQLEDHYFGSIKPRILNFMSDVEQELWRLGIPAKTRHNEVAPAQFELAPLFEDVNLAIDHNMLVMEVL RQQASKHGLVCLLHEKPFAGVNGSGKHNNWSISYGNKNLLDPGSDPQQNAIFLTVLTAIIEAVDKHSDLLRNSVASAGND HRLGANEAPPAIISIFLGAQLNEVIENMINGSSGCGKRNDTLKIGVDTLPVLPRDATDRNRTSPFAFTGNKFEFRAPGSS QSCAGPMMTLNTIVAESLDSLAEELSSFAPETFLPQLQETLKRRISEHKRIIFNGDNYSEEWVKEAERRGLPNLKNTMTA LHTLVNEKNVALFEKYGVFSRRELESRFEIFLEEYHRRIRIEGRLSWEMAATIILPALRNEYGQTVAALSRALEARRTNG TAALQKLADKLGDALDSIVSDLDTLETALTSCHEDILAAMSRLRTSVDAAETLVNDRSWPLPKYREMLFIY >Mature_711_residues MMSDSTRTQAISAIASLPVGGASESAPVSIDYYGADVFSTEVMKKYLPKDTAKTLLATIQDGLPLNADIAADVAHAMKQW ALERGATHYTHWFQPMTGSTAEKHDSFLDPKGMEPIMSFSGKNLIVSEPDASSFPSGGLRCTFEARGYTAWDPTSPAFIK RHGNGATLCIPTAYCSYTGDALDKKTPLLRSRQALGNAVKKLMKSFGLPDEHVTITLGPEQEYFLIDKNFYLNRPDLVQT GRTLFGAPPAKHQQLEDHYFGSIKPRILNFMSDVEQELWRLGIPAKTRHNEVAPAQFELAPLFEDVNLAIDHNMLVMEVL RQQASKHGLVCLLHEKPFAGVNGSGKHNNWSISYGNKNLLDPGSDPQQNAIFLTVLTAIIEAVDKHSDLLRNSVASAGND HRLGANEAPPAIISIFLGAQLNEVIENMINGSSGCGKRNDTLKIGVDTLPVLPRDATDRNRTSPFAFTGNKFEFRAPGSS QSCAGPMMTLNTIVAESLDSLAEELSSFAPETFLPQLQETLKRRISEHKRIIFNGDNYSEEWVKEAERRGLPNLKNTMTA LHTLVNEKNVALFEKYGVFSRRELESRFEIFLEEYHRRIRIEGRLSWEMAATIILPALRNEYGQTVAALSRALEARRTNG TAALQKLADKLGDALDSIVSDLDTLETALTSCHEDILAAMSRLRTSVDAAETLVNDRSWPLPKYREMLFIY
Specific function: Unknown
COG id: COG3968
COG function: function code R; Uncharacterized protein related to glutamine synthetase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glutamine synthetase family. Type 3 subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1040 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 15324 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal medi
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014746 - InterPro: IPR008146 - InterPro: IPR022147 [H]
Pfam domain/function: PF00120 Gln-synt_C; PF12437 GSIII_N [H]
EC number: =6.3.1.2 [H]
Molecular weight: Translated: 78734; Mature: 78734
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS00181 GLNA_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMSDSTRTQAISAIASLPVGGASESAPVSIDYYGADVFSTEVMKKYLPKDTAKTLLATIQ CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH DGLPLNADIAADVAHAMKQWALERGATHYTHWFQPMTGSTAEKHDSFLDPKGMEPIMSFS CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHCC GKNLIVSEPDASSFPSGGLRCTFEARGYTAWDPTSPAFIKRHGNGATLCIPTAYCSYTGD CCEEEEECCCCCCCCCCCEEEEEEECCEECCCCCCCHHEEECCCCCEEEEECHHHCCCCC ALDKKTPLLRSRQALGNAVKKLMKSFGLPDEHVTITLGPEQEYFLIDKNFYLNRPDLVQT HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCEECCCCHHHHC GRTLFGAPPAKHQQLEDHYFGSIKPRILNFMSDVEQELWRLGIPAKTRHNEVAPAQFELA CCHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH PLFEDVNLAIDHNMLVMEVLRQQASKHGLVCLLHEKPFAGVNGSGKHNNWSISYGNKNLL HHHHCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC DPGSDPQQNAIFLTVLTAIIEAVDKHSDLLRNSVASAGNDHRLGANEAPPAIISIFLGAQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LNEVIENMINGSSGCGKRNDTLKIGVDTLPVLPRDATDRNRTSPFAFTGNKFEFRAPGSS HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCC QSCAGPMMTLNTIVAESLDSLAEELSSFAPETFLPQLQETLKRRISEHKRIIFNGDNYSE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCH EWVKEAERRGLPNLKNTMTALHTLVNEKNVALFEKYGVFSRRELESRFEIFLEEYHRRIR HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEE IEGRLSWEMAATIILPALRNEYGQTVAALSRALEARRTNGTAALQKLADKLGDALDSIVS ECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DLDTLETALTSCHEDILAAMSRLRTSVDAAETLVNDRSWPLPKYREMLFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECC >Mature Secondary Structure MMSDSTRTQAISAIASLPVGGASESAPVSIDYYGADVFSTEVMKKYLPKDTAKTLLATIQ CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHH DGLPLNADIAADVAHAMKQWALERGATHYTHWFQPMTGSTAEKHDSFLDPKGMEPIMSFS CCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCHHHHCC GKNLIVSEPDASSFPSGGLRCTFEARGYTAWDPTSPAFIKRHGNGATLCIPTAYCSYTGD CCEEEEECCCCCCCCCCCEEEEEEECCEECCCCCCCHHEEECCCCCEEEEECHHHCCCCC ALDKKTPLLRSRQALGNAVKKLMKSFGLPDEHVTITLGPEQEYFLIDKNFYLNRPDLVQT HHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCEECCCCHHHHC GRTLFGAPPAKHQQLEDHYFGSIKPRILNFMSDVEQELWRLGIPAKTRHNEVAPAQFELA CCHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEHH PLFEDVNLAIDHNMLVMEVLRQQASKHGLVCLLHEKPFAGVNGSGKHNNWSISYGNKNLL HHHHCCCEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCC DPGSDPQQNAIFLTVLTAIIEAVDKHSDLLRNSVASAGNDHRLGANEAPPAIISIFLGAQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHH LNEVIENMINGSSGCGKRNDTLKIGVDTLPVLPRDATDRNRTSPFAFTGNKFEFRAPGSS HHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCCC QSCAGPMMTLNTIVAESLDSLAEELSSFAPETFLPQLQETLKRRISEHKRIIFNGDNYSE CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCH EWVKEAERRGLPNLKNTMTALHTLVNEKNVALFEKYGVFSRRELESRFEIFLEEYHRRIR HHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEE IEGRLSWEMAATIILPALRNEYGQTVAALSRALEARRTNGTAALQKLADKLGDALDSIVS ECCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH DLDTLETALTSCHEDILAAMSRLRTSVDAAETLVNDRSWPLPKYREMLFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2576872 [H]