Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pckG [H]
Identifier: 187735704
GI number: 187735704
Start: 1445495
End: 1447321
Strand: Reverse
Name: pckG [H]
Synonym: Amuc_1210
Alternate gene names: 187735704
Gene position: 1447321-1445495 (Counterclockwise)
Preceding gene: 187735708
Following gene: 187735703
Centisome position: 54.33
GC content: 60.54
Gene sequence:
>1827_bases ATGAGTACCACTCACGAAGCAGCTAAGAAGTGGGTCGAAGAAATCGCCCAGCTTTGCCAACCCGACTCCATCTACTGGTG CAACGGCTCTCAGGAAGAAAATGACGAGCTTTGCAACATGATGGTAGAAAAGGGCACCTTTATCAAACTGAACCCCGAGA AGCGCCCCGGGTGCTTCCTCGCCCGTTCCACCCCCTCCGATGTAGCCCGTGTGGAAGACCGCACGTTCATCTGCAGCGAG AAGGAAGAAGACGCCGGCCCGACCAACCACTGGGCTGATCCCGTTGAAATGAAGGCCAAACTGAAGGGCCTCTTCAATGG CTGCATGAAGGGCCGTACCATGTACGTGATTCCCTTCTGCATGGGTCCCCTGGACTCCCCCCTGGCCAAAATCGGCATTG AAATCACGGACTCTCCCTATGTCGTGACCAACATGCGCATCATGACCAAGATGGGTGAACAGGTTCTCAAGCGCCTGGAA GACGAAGTCAAGGGCGGCGGCAACCCGAAGCGTGACGGTTACGGGACATTCGTTCCCTGCCTCCACACCGTGGGCGCTCC GCTTGCGGACGGCCAGGTTGACGTGCCGTGGCCCTGCAACGAAGAAAAGTACATCTGCCACTTCCCGGAAACGGAAGAAA TCTGGTCCTTCGGTTCCGGTTACGGCGGCAACGCCCTGCTCGGCAAAAAGTGCCTGGCCCTGCGCATCGCCTCCGCCATC GCCCGCAAGAACAAGTGGATGGCTGAACACATGCTCCTTCTGGGCATTGAATCCCCGGACGGCACCAAGGCCTACGTCGG CGGCGCATTCCCGTCCGCCTGCGGCAAGACCAACCTGGCCATGCTCGTCCCCCCCGCCTCCTACCGGGAAGCCGGCTGGA AAACCTCCATCATCGGTGACGACATCGCCTGGATCTGGCCCCATGAAGACGGCACCTTCCATGCCATCAACCCGGAAAAC GGCTACTTCGGCGTGGCTCCCGGCACGTCCTACAAGACGAACCCGATCGCCATGGACACCATCAAGGAAAACGTCATCTT CACCAACGTCGGTCTGACCGACGACGGCGACGTCTGGTGGGAAGGCATGGACGGCCCCGCTCCCGCCCACGCCATCGACT GGCAGGGCAATGACTGGACCCCGGATTGCGGACGCAAGTGCGCTCATCCGAACGCCCGTTTCACCGCCCCCGCCTCCCAG TGCCCGACGATTGATCCCGAATGGCAGAACCCGGAAGGCGTTTCCCTTTCCGCGATCCTGTTCGGCGGCCGCCGCGCCAC CACCATGCCCCTCGTCTTCCAGTCCCGCGACTGGACGCACGGCGTTTACGTCGGTGCGACGATGGGTTCGGAAATGACCG CCGCCGCCTTCGGCAACATCGGTCAGGTCCGCCGCGACCCGATGGCCATGCTTCCCTTCATCGGCTACCATGTGGGCGAC TACTGGCAGCACTGGCTGGACATGGGCAAAACCGTTGCCAATCCTCCGCTGATCTTCAACGTGAACTGGTTCCGCAAGGA CAAGAACGGCAACTTCATCTGGCCGGGCTACGGCGACAACATGCGCGTTCTCGACTGGATTCTGCGCCGCGCCAAGGGCA AGGCTGAAGGCCAGAAGACCGTGCTGGGCGTCTCCCCGACCTATGCCGAACTGGATAAGACGGGCCTCGACTACAGCGAA GAACAGTTCAACGCCAACATGGCTCTCAACCCGAGCGAATGGCAGGCTGAACTGGAAAGCCAGACCGAGCTGTTCGACAA GGTGGGCAAAAAGCTCCCGGCCGAACTGGAAGAACAGCGCCAGCTTCTCATCAAGAGCTTTTCTTAA
Upstream 100 bases:
>100_bases CCCGCATGCGGTTTCCATGCCCGGAGAAACAAAACCGCCCCATAAAAAGCCGCACGGGAAGCTTGCCAACGGCTATTTCC GTGCATACACTATCTTCACC
Downstream 100 bases:
>100_bases AAGTCCACCTGACTTAAGAAAAAACTCTTAAGGCAGAGGCCGCCCTTTAACAGGGCGGCCTCTTTTATTCCATAGCAACG AATTTCAAATCCGTTTTACA
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase [H]
Number of amino acids: Translated: 608; Mature: 607
Protein sequence:
>608_residues MSTTHEAAKKWVEEIAQLCQPDSIYWCNGSQEENDELCNMMVEKGTFIKLNPEKRPGCFLARSTPSDVARVEDRTFICSE KEEDAGPTNHWADPVEMKAKLKGLFNGCMKGRTMYVIPFCMGPLDSPLAKIGIEITDSPYVVTNMRIMTKMGEQVLKRLE DEVKGGGNPKRDGYGTFVPCLHTVGAPLADGQVDVPWPCNEEKYICHFPETEEIWSFGSGYGGNALLGKKCLALRIASAI ARKNKWMAEHMLLLGIESPDGTKAYVGGAFPSACGKTNLAMLVPPASYREAGWKTSIIGDDIAWIWPHEDGTFHAINPEN GYFGVAPGTSYKTNPIAMDTIKENVIFTNVGLTDDGDVWWEGMDGPAPAHAIDWQGNDWTPDCGRKCAHPNARFTAPASQ CPTIDPEWQNPEGVSLSAILFGGRRATTMPLVFQSRDWTHGVYVGATMGSEMTAAAFGNIGQVRRDPMAMLPFIGYHVGD YWQHWLDMGKTVANPPLIFNVNWFRKDKNGNFIWPGYGDNMRVLDWILRRAKGKAEGQKTVLGVSPTYAELDKTGLDYSE EQFNANMALNPSEWQAELESQTELFDKVGKKLPAELEEQRQLLIKSFS
Sequences:
>Translated_608_residues MSTTHEAAKKWVEEIAQLCQPDSIYWCNGSQEENDELCNMMVEKGTFIKLNPEKRPGCFLARSTPSDVARVEDRTFICSE KEEDAGPTNHWADPVEMKAKLKGLFNGCMKGRTMYVIPFCMGPLDSPLAKIGIEITDSPYVVTNMRIMTKMGEQVLKRLE DEVKGGGNPKRDGYGTFVPCLHTVGAPLADGQVDVPWPCNEEKYICHFPETEEIWSFGSGYGGNALLGKKCLALRIASAI ARKNKWMAEHMLLLGIESPDGTKAYVGGAFPSACGKTNLAMLVPPASYREAGWKTSIIGDDIAWIWPHEDGTFHAINPEN GYFGVAPGTSYKTNPIAMDTIKENVIFTNVGLTDDGDVWWEGMDGPAPAHAIDWQGNDWTPDCGRKCAHPNARFTAPASQ CPTIDPEWQNPEGVSLSAILFGGRRATTMPLVFQSRDWTHGVYVGATMGSEMTAAAFGNIGQVRRDPMAMLPFIGYHVGD YWQHWLDMGKTVANPPLIFNVNWFRKDKNGNFIWPGYGDNMRVLDWILRRAKGKAEGQKTVLGVSPTYAELDKTGLDYSE EQFNANMALNPSEWQAELESQTELFDKVGKKLPAELEEQRQLLIKSFS >Mature_607_residues STTHEAAKKWVEEIAQLCQPDSIYWCNGSQEENDELCNMMVEKGTFIKLNPEKRPGCFLARSTPSDVARVEDRTFICSEK EEDAGPTNHWADPVEMKAKLKGLFNGCMKGRTMYVIPFCMGPLDSPLAKIGIEITDSPYVVTNMRIMTKMGEQVLKRLED EVKGGGNPKRDGYGTFVPCLHTVGAPLADGQVDVPWPCNEEKYICHFPETEEIWSFGSGYGGNALLGKKCLALRIASAIA RKNKWMAEHMLLLGIESPDGTKAYVGGAFPSACGKTNLAMLVPPASYREAGWKTSIIGDDIAWIWPHEDGTFHAINPENG YFGVAPGTSYKTNPIAMDTIKENVIFTNVGLTDDGDVWWEGMDGPAPAHAIDWQGNDWTPDCGRKCAHPNARFTAPASQC PTIDPEWQNPEGVSLSAILFGGRRATTMPLVFQSRDWTHGVYVGATMGSEMTAAAFGNIGQVRRDPMAMLPFIGYHVGDY WQHWLDMGKTVANPPLIFNVNWFRKDKNGNFIWPGYGDNMRVLDWILRRAKGKAEGQKTVLGVSPTYAELDKTGLDYSEE QFNANMALNPSEWQAELESQTELFDKVGKKLPAELEEQRQLLIKSFS
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle [H]
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family [H]
Homologues:
Organism=Homo sapiens, GI187281517, Length=622, Percent_Identity=48.0707395498392, Blast_Score=570, Evalue=1e-162, Organism=Homo sapiens, GI66346721, Length=610, Percent_Identity=48.3606557377049, Blast_Score=567, Evalue=1e-161, Organism=Homo sapiens, GI66346723, Length=390, Percent_Identity=50.5128205128205, Blast_Score=372, Evalue=1e-103, Organism=Caenorhabditis elegans, GI71989645, Length=614, Percent_Identity=45.6026058631922, Blast_Score=531, Evalue=1e-151, Organism=Caenorhabditis elegans, GI71989658, Length=614, Percent_Identity=45.6026058631922, Blast_Score=531, Evalue=1e-151, Organism=Caenorhabditis elegans, GI17555492, Length=624, Percent_Identity=44.7115384615385, Blast_Score=525, Evalue=1e-149, Organism=Caenorhabditis elegans, GI71989653, Length=602, Percent_Identity=46.0132890365449, Blast_Score=523, Evalue=1e-149, Organism=Caenorhabditis elegans, GI32564411, Length=567, Percent_Identity=47.0899470899471, Blast_Score=514, Evalue=1e-146, Organism=Caenorhabditis elegans, GI32564407, Length=533, Percent_Identity=47.0919324577861, Blast_Score=479, Evalue=1e-135, Organism=Caenorhabditis elegans, GI71989649, Length=495, Percent_Identity=47.8787878787879, Blast_Score=458, Evalue=1e-129, Organism=Caenorhabditis elegans, GI32564409, Length=367, Percent_Identity=44.9591280653951, Blast_Score=320, Evalue=2e-87, Organism=Caenorhabditis elegans, GI17540956, Length=588, Percent_Identity=23.8095238095238, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24655085, Length=606, Percent_Identity=50.6600660066007, Blast_Score=587, Evalue=1e-168, Organism=Drosophila melanogaster, GI24655082, Length=610, Percent_Identity=50, Blast_Score=580, Evalue=1e-165, Organism=Drosophila melanogaster, GI161077226, Length=576, Percent_Identity=50.8680555555556, Blast_Score=549, Evalue=1e-156, Organism=Drosophila melanogaster, GI24655088, Length=508, Percent_Identity=52.3622047244094, Blast_Score=509, Evalue=1e-144,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 [H]
Pfam domain/function: PF00821 PEPCK [H]
EC number: =4.1.1.32 [H]
Molecular weight: Translated: 67521; Mature: 67390
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00505 PEPCK_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTHEAAKKWVEEIAQLCQPDSIYWCNGSQEENDELCNMMVEKGTFIKLNPEKRPGCFL CCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEE ARSTPSDVARVEDRTFICSEKEEDAGPTNHWADPVEMKAKLKGLFNGCMKGRTMYVIPFC ECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEE MGPLDSPLAKIGIEITDSPYVVTNMRIMTKMGEQVLKRLEDEVKGGGNPKRDGYGTFVPC CCCCCCCHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LHTVGAPLADGQVDVPWPCNEEKYICHFPETEEIWSFGSGYGGNALLGKKCLALRIASAI HHHCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ARKNKWMAEHMLLLGIESPDGTKAYVGGAFPSACGKTNLAMLVPPASYREAGWKTSIIGD HHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHCCCEEEECCC DIAWIWPHEDGTFHAINPENGYFGVAPGTSYKTNPIAMDTIKENVIFTNVGLTDDGDVWW CEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCCEEHHHHCCCEEEEECCCCCCCCEEE EGMDGPAPAHAIDWQGNDWTPDCGRKCAHPNARFTAPASQCPTIDPEWQNPEGVSLSAIL ECCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEE FGGRRATTMPLVFQSRDWTHGVYVGATMGSEMTAAAFGNIGQVRRDPMAMLPFIGYHVGD ECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHH YWQHWLDMGKTVANPPLIFNVNWFRKDKNGNFIWPGYGDNMRVLDWILRRAKGKAEGQKT HHHHHHHHCHHHCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEE VLGVSPTYAELDKTGLDYSEEQFNANMALNPSEWQAELESQTELFDKVGKKLPAELEEQR EEECCCCHHHHHHCCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QLLIKSFS HHHHHCCC >Mature Secondary Structure STTHEAAKKWVEEIAQLCQPDSIYWCNGSQEENDELCNMMVEKGTFIKLNPEKRPGCFL CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCCCCCEEE ARSTPSDVARVEDRTFICSEKEEDAGPTNHWADPVEMKAKLKGLFNGCMKGRTMYVIPFC ECCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEE MGPLDSPLAKIGIEITDSPYVVTNMRIMTKMGEQVLKRLEDEVKGGGNPKRDGYGTFVPC CCCCCCCHHHCCEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH LHTVGAPLADGQVDVPWPCNEEKYICHFPETEEIWSFGSGYGGNALLGKKCLALRIASAI HHHCCCCCCCCEEECCCCCCCCCEEEECCCHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ARKNKWMAEHMLLLGIESPDGTKAYVGGAFPSACGKTNLAMLVPPASYREAGWKTSIIGD HHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHCCCEEEECCC DIAWIWPHEDGTFHAINPENGYFGVAPGTSYKTNPIAMDTIKENVIFTNVGLTDDGDVWW CEEEEEECCCCCEEEECCCCCEEECCCCCCCCCCCEEHHHHCCCEEEEECCCCCCCCEEE EGMDGPAPAHAIDWQGNDWTPDCGRKCAHPNARFTAPASQCPTIDPEWQNPEGVSLSAIL ECCCCCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCCCEEEEEE FGGRRATTMPLVFQSRDWTHGVYVGATMGSEMTAAAFGNIGQVRRDPMAMLPFIGYHVGD ECCCCCEEEEEEEECCCCCCCEEEEEECCCCHHHHHHCCCHHHHCCCHHHHHHHHHHHHH YWQHWLDMGKTVANPPLIFNVNWFRKDKNGNFIWPGYGDNMRVLDWILRRAKGKAEGQKT HHHHHHHHCHHHCCCCEEEEEEEEEECCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCEE VLGVSPTYAELDKTGLDYSEEQFNANMALNPSEWQAELESQTELFDKVGKKLPAELEEQR EEECCCCHHHHHHCCCCCCHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QLLIKSFS HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA