Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735703
Identifier: 187735703
GI number: 187735703
Start: 1444463
End: 1445212
Strand: Reverse
Name: 187735703
Synonym: Amuc_1209
Alternate gene names: NA
Gene position: 1445212-1444463 (Counterclockwise)
Preceding gene: 187735704
Following gene: 187735699
Centisome position: 54.25
GC content: 53.47
Gene sequence:
>750_bases ATGGCTATCAATCTATCCATTAAAAAATATTTGCCGCTGGCAGCAGGGCTGCTTTTCTGTGGTGCGGCAAAGGCGGCGGA GACAGCTACCTATACATGGGATTTTTCCTCCGCGGCTGCCGTCATGGGGGGAACTGCTACAGGTAATTTCAATACTGCCC AAGATGCAGAGAAGGGGACGGTTCTTACCGGTTCCACCTTTGACGAACGCGGTACAAATGTATTCCGGGAAATGCTGAAC GGAGCCCTTTCCGGGGAGGGGACCATGAGCATCACCATGGACATCTCATGGGGAGGCAACAATTCCCTTGAAAATATCAT TCACGTTGCCCGCAGCGGATTCGGCTTCAGCCTGGGACTCAGCAATGGGGCTGTTGCCATCAACTCCGGCAATCTCTCCT CCGGAGGAGCAATCGCAGAAGCCGGACTGACGGCAAATACGTGGACAAACGTAACCGTTGATATCCTGGGACATGACGTA ACCGTTACTCTTGATAATGGTACTGCCGCCAGCACCGCAACCGTTTCTATCAGCGATATCGACTGGTACACCGGAACCGC GGACGGAGGAGATACCCAAAACGAGATGTACAGCATTGGACATCGTGCTCCCGGTTGGAATAATGACGGCTTGAACGGCA CGAAACTGAGTTCGCTCTCCGTCTCTTATGCCGCTGTTCCGGAACCCTCCACAGCGGCATTGTCTCTGCTTGCGTTCGCG GGATTTGCCGCACGCAGAAGGAGAAAATAA
Upstream 100 bases:
>100_bases GGATATTTTCAAAAACCTATTTATCAATGGGTTAATATAGAAAAACATTCAACGAATTTGAAAATCGTTGAATCTTTTTG CAATTACGTGCTATTGTCAT
Downstream 100 bases:
>100_bases CTTCCCTTTCCTCCTTTAATGCCAGCCGTTCCTTTCTTCCCAGGGAACGGCTTTTTTATTGCGCCAAGGCAATAACGGTG GCGGCGGCGCTCAACCTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MAINLSIKKYLPLAAGLLFCGAAKAAETATYTWDFSSAAAVMGGTATGNFNTAQDAEKGTVLTGSTFDERGTNVFREMLN GALSGEGTMSITMDISWGGNNSLENIIHVARSGFGFSLGLSNGAVAINSGNLSSGGAIAEAGLTANTWTNVTVDILGHDV TVTLDNGTAASTATVSISDIDWYTGTADGGDTQNEMYSIGHRAPGWNNDGLNGTKLSSLSVSYAAVPEPSTAALSLLAFA GFAARRRRK
Sequences:
>Translated_249_residues MAINLSIKKYLPLAAGLLFCGAAKAAETATYTWDFSSAAAVMGGTATGNFNTAQDAEKGTVLTGSTFDERGTNVFREMLN GALSGEGTMSITMDISWGGNNSLENIIHVARSGFGFSLGLSNGAVAINSGNLSSGGAIAEAGLTANTWTNVTVDILGHDV TVTLDNGTAASTATVSISDIDWYTGTADGGDTQNEMYSIGHRAPGWNNDGLNGTKLSSLSVSYAAVPEPSTAALSLLAFA GFAARRRRK >Mature_248_residues AINLSIKKYLPLAAGLLFCGAAKAAETATYTWDFSSAAAVMGGTATGNFNTAQDAEKGTVLTGSTFDERGTNVFREMLNG ALSGEGTMSITMDISWGGNNSLENIIHVARSGFGFSLGLSNGAVAINSGNLSSGGAIAEAGLTANTWTNVTVDILGHDVT VTLDNGTAASTATVSISDIDWYTGTADGGDTQNEMYSIGHRAPGWNNDGLNGTKLSSLSVSYAAVPEPSTAALSLLAFAG FAARRRRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25550; Mature: 25419
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAINLSIKKYLPLAAGLLFCGAAKAAETATYTWDFSSAAAVMGGTATGNFNTAQDAEKGT CEEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHEECCCCCCCCCCCCCCCCCE VLTGSTFDERGTNVFREMLNGALSGEGTMSITMDISWGGNNSLENIIHVARSGFGFSLGL EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEC SNGAVAINSGNLSSGGAIAEAGLTANTWTNVTVDILGHDVTVTLDNGTAASTATVSISDI CCCEEEEECCCCCCCCCEEECCCEECCCCCEEEEEECCEEEEEECCCCCCCEEEEEEECC DWYTGTADGGDTQNEMYSIGHRAPGWNNDGLNGTKLSSLSVSYAAVPEPSTAALSLLAFA CEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH GFAARRRRK HHHHHHCCC >Mature Secondary Structure AINLSIKKYLPLAAGLLFCGAAKAAETATYTWDFSSAAAVMGGTATGNFNTAQDAEKGT EEECCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHEECCCCCCCCCCCCCCCCCE VLTGSTFDERGTNVFREMLNGALSGEGTMSITMDISWGGNNSLENIIHVARSGFGFSLGL EEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCHHHHHHHHHHCCCCEEEEC SNGAVAINSGNLSSGGAIAEAGLTANTWTNVTVDILGHDVTVTLDNGTAASTATVSISDI CCCEEEEECCCCCCCCCEEECCCEECCCCCEEEEEECCEEEEEECCCCCCCEEEEEEECC DWYTGTADGGDTQNEMYSIGHRAPGWNNDGLNGTKLSSLSVSYAAVPEPSTAALSLLAFA CEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHH GFAARRRRK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA