Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735644

Identifier: 187735644

GI number: 187735644

Start: 1377253

End: 1377831

Strand: Direct

Name: 187735644

Synonym: Amuc_1149

Alternate gene names: NA

Gene position: 1377253-1377831 (Clockwise)

Preceding gene: 187735643

Following gene: 187735645

Centisome position: 51.7

GC content: 41.11

Gene sequence:

>579_bases
ATGACTACGGTGGCGCAGCCTCTGAAACCGGTATTTGTACGCGTAGCAGATCCTCTCAATCCGGAATCTCCCCAGTCAAG
AGAAAAGATAAGGGACTTGTCACAACAGCAGAGGCAGCAGTTGGCGGGCTATATCGTTCATTCTGCAAATTGGGAACAAA
TGACCAGGAAAGAATTTGAACTGATCCGCAGCGGACGGGGCCAGGAAGGTTTGTCTATGGATCACTGGAGTTCCGATAGT
TATTTTAACAGGATGACTGTTCCCTATATCCGTTCGTCGAGTAAGGATGAAGATATTTTATCCCTTCTTCAAAACAATGA
AGACGGAGAAGTTATTTTGAGCAGAGCGAATCTTTTTGAATTGGTAGCGGAAAATTATATAGAACATTATCCTGATGATA
AGAAAGGATGGGATTTTTTATGGTTTTTTATGGGTGAGGACGTAGACGAAATACCTTTTTGCAGTATAATTAAAGAAATG
ATTATAAAGAGGAATCTCGATCGATTCTCCTATGGGAAGAAAATATTGGATATGATAGGCGATTCCTCTATCAGAAAGAA
TGATGGACGTTGCCTTTAG

Upstream 100 bases:

>100_bases
CTGGATGTTCATGTTTCCAGATATAAAGAATATGGTTTTTAGTAAAATATTATACTTTTTCTTGTTTCCGGCTGTATTGT
TTCCATCCTGTCGCCAGGGG

Downstream 100 bases:

>100_bases
TTCTATAGAGGGGCTGACAGACAACAAACTTTGGTCTGAAGCAGGGAAGAATAGTTCAGGATATGGGCTGAGTTTGCAAA
TTTTCTCAACTGAACCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDS
YFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEM
IIKRNLDRFSYGKKILDMIGDSSIRKNDGRCL

Sequences:

>Translated_192_residues
MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDS
YFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEM
IIKRNLDRFSYGKKILDMIGDSSIRKNDGRCL
>Mature_191_residues
TTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDSY
FNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMI
IKRNLDRFSYGKKILDMIGDSSIRKNDGRCL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22432; Mature: 22300

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFE
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIRSGRGQEGLSMDHWSSDSYFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFE
HHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH
LVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMIIKRNLDRFSYGKKILDMIG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC
DSSIRKNDGRCL
CCCCCCCCCCCC
>Mature Secondary Structure 
TTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFE
CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
LIRSGRGQEGLSMDHWSSDSYFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFE
HHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH
LVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMIIKRNLDRFSYGKKILDMIG
HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC
DSSIRKNDGRCL
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA