Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735644
Identifier: 187735644
GI number: 187735644
Start: 1377253
End: 1377831
Strand: Direct
Name: 187735644
Synonym: Amuc_1149
Alternate gene names: NA
Gene position: 1377253-1377831 (Clockwise)
Preceding gene: 187735643
Following gene: 187735645
Centisome position: 51.7
GC content: 41.11
Gene sequence:
>579_bases ATGACTACGGTGGCGCAGCCTCTGAAACCGGTATTTGTACGCGTAGCAGATCCTCTCAATCCGGAATCTCCCCAGTCAAG AGAAAAGATAAGGGACTTGTCACAACAGCAGAGGCAGCAGTTGGCGGGCTATATCGTTCATTCTGCAAATTGGGAACAAA TGACCAGGAAAGAATTTGAACTGATCCGCAGCGGACGGGGCCAGGAAGGTTTGTCTATGGATCACTGGAGTTCCGATAGT TATTTTAACAGGATGACTGTTCCCTATATCCGTTCGTCGAGTAAGGATGAAGATATTTTATCCCTTCTTCAAAACAATGA AGACGGAGAAGTTATTTTGAGCAGAGCGAATCTTTTTGAATTGGTAGCGGAAAATTATATAGAACATTATCCTGATGATA AGAAAGGATGGGATTTTTTATGGTTTTTTATGGGTGAGGACGTAGACGAAATACCTTTTTGCAGTATAATTAAAGAAATG ATTATAAAGAGGAATCTCGATCGATTCTCCTATGGGAAGAAAATATTGGATATGATAGGCGATTCCTCTATCAGAAAGAA TGATGGACGTTGCCTTTAG
Upstream 100 bases:
>100_bases CTGGATGTTCATGTTTCCAGATATAAAGAATATGGTTTTTAGTAAAATATTATACTTTTTCTTGTTTCCGGCTGTATTGT TTCCATCCTGTCGCCAGGGG
Downstream 100 bases:
>100_bases TTCTATAGAGGGGCTGACAGACAACAAACTTTGGTCTGAAGCAGGGAAGAATAGTTCAGGATATGGGCTGAGTTTGCAAA TTTTCTCAACTGAACCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDS YFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEM IIKRNLDRFSYGKKILDMIGDSSIRKNDGRCL
Sequences:
>Translated_192_residues MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDS YFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEM IIKRNLDRFSYGKKILDMIGDSSIRKNDGRCL >Mature_191_residues TTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFELIRSGRGQEGLSMDHWSSDSY FNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFELVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMI IKRNLDRFSYGKKILDMIGDSSIRKNDGRCL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22432; Mature: 22300
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFE CCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LIRSGRGQEGLSMDHWSSDSYFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFE HHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH LVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMIIKRNLDRFSYGKKILDMIG HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC DSSIRKNDGRCL CCCCCCCCCCCC >Mature Secondary Structure TTVAQPLKPVFVRVADPLNPESPQSREKIRDLSQQQRQQLAGYIVHSANWEQMTRKEFE CCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LIRSGRGQEGLSMDHWSSDSYFNRMTVPYIRSSSKDEDILSLLQNNEDGEVILSRANLFE HHHCCCCCCCCCCCCCCCCCHHCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEHHHHHHHH LVAENYIEHYPDDKKGWDFLWFFMGEDVDEIPFCSIIKEMIIKRNLDRFSYGKKILDMIG HHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHC DSSIRKNDGRCL CCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA