Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735581
Identifier: 187735581
GI number: 187735581
Start: 1298356
End: 1298763
Strand: Direct
Name: 187735581
Synonym: Amuc_1086
Alternate gene names: NA
Gene position: 1298356-1298763 (Clockwise)
Preceding gene: 187735580
Following gene: 187735589
Centisome position: 48.74
GC content: 53.92
Gene sequence:
>408_bases ATGAGTAAGGTTCAATGGGAAATTTCAAATGATGAAGTGACCGACCGTGATACTGCTCTGCGCCGCTTGCAGGAAGGAAC GACCGGCCACGTGGTGTGCGCCCGCGACGGCGCGTGCCTCCAGTCTTATAAGGAAGCGGATGGCGTGTACCATTGCGAAA TTGTATTCAAGACGGATTCCTGCTGCCCGCCGGTATTCGCCGCCCCGGAAGGGGTGACGGGAAAGGAGCTGGAAATGCTT TACGATCGTTTTGCCAATGGGGACGATTTTTCCTTTGTGGAAAAGGAATGGGAACCTCTGATGGCCGTGGAATACCGCCA TCGCCACAATGTGATGTGGTTCATCTTCCTGTTCATTGCGCTGGTAATTGCGGCCATGGCGGCATATCAGCACGGTTGGA TTGAGTGA
Upstream 100 bases:
>100_bases TTTTGCCACGCCGGAAGATGGATGGGAGCCGCAACGTTTCCGGGGGCCGAAGCGTTTAAAACCATATTGACTTAAACGGG AATTATCTTAAACTGACAGA
Downstream 100 bases:
>100_bases CAGGGTAGAGGCTGGCTGCGGCAGGCGCCGTAGCAGAAAAACCTGCAAACCGTAGAAAATGGTTTGCAGGTTCTGGATGG GATAACCGGGGCCGGGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEML YDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE
Sequences:
>Translated_135_residues MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEML YDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE >Mature_134_residues SKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDSCCPPVFAAPEGVTGKELEMLY DRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIALVIAAMAAYQHGWIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15502; Mature: 15370
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.7 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 3.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDS CCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEECCC CCPPVFAAPEGVTGKELEMLYDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH LVIAAMAAYQHGWIE HHHHHHHHHHCCCCC >Mature Secondary Structure SKVQWEISNDEVTDRDTALRRLQEGTTGHVVCARDGACLQSYKEADGVYHCEIVFKTDS CCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEEECCC CCPPVFAAPEGVTGKELEMLYDRFANGDDFSFVEKEWEPLMAVEYRHRHNVMWFIFLFIA CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHCCHHHHHHHHHH LVIAAMAAYQHGWIE HHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA