Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735579

Identifier: 187735579

GI number: 187735579

Start: 1295787

End: 1296056

Strand: Reverse

Name: 187735579

Synonym: Amuc_1084

Alternate gene names: NA

Gene position: 1296056-1295787 (Counterclockwise)

Preceding gene: 187735582

Following gene: 187735578

Centisome position: 48.65

GC content: 55.56

Gene sequence:

>270_bases
ATGCCGCCAAGGCCGGATGAACCCAATCAAAACATTACCATGAGTTACATGAACAACAAAGGCCTCTGGGGCTTCGTCGG
AGGAATGATCGCCGCCGCCATCGGAGCGAAAGTAGTAAAAAGTCCCGTTGCCAGGAAATTGGCCGTCCAGGGCCTTTCCA
AGGCCATGCTCATCCAGCAGAAGGCCATGGAACAACTGGCAAACATCCGGGAAGAAGCCCAAGACCTGTGCCATGAGGCC
GCCGCGAAAAACAGCAGGCCGGAACAGTAG

Upstream 100 bases:

>100_bases
TAGTTTCAACTAATTCATCTTGACCAGAATACGGGGGCACGCTAAAAAAATGCAGGCTGGATTGGATATAATCCAATCCT
TCCGGAAAAGAAGCGGCTGC

Downstream 100 bases:

>100_bases
CAATCTCATTGTCCATCACCAAACAGCGGGGCGCCCGTTTCCTTCTCCGCCAGCGGAATGGACCGCCCCCAACGGGGGAA
ACGCACGGAGAAGGGCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEA
AAKNSRPEQ

Sequences:

>Translated_89_residues
MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEA
AAKNSRPEQ
>Mature_88_residues
PPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEAA
AKNSRPEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9689; Mature: 9558

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQ
CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAMEQLANIREEAQDLCHEAAAKNSRPEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQ
CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAMEQLANIREEAQDLCHEAAAKNSRPEQ
HHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA