Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735579
Identifier: 187735579
GI number: 187735579
Start: 1295787
End: 1296056
Strand: Reverse
Name: 187735579
Synonym: Amuc_1084
Alternate gene names: NA
Gene position: 1296056-1295787 (Counterclockwise)
Preceding gene: 187735582
Following gene: 187735578
Centisome position: 48.65
GC content: 55.56
Gene sequence:
>270_bases ATGCCGCCAAGGCCGGATGAACCCAATCAAAACATTACCATGAGTTACATGAACAACAAAGGCCTCTGGGGCTTCGTCGG AGGAATGATCGCCGCCGCCATCGGAGCGAAAGTAGTAAAAAGTCCCGTTGCCAGGAAATTGGCCGTCCAGGGCCTTTCCA AGGCCATGCTCATCCAGCAGAAGGCCATGGAACAACTGGCAAACATCCGGGAAGAAGCCCAAGACCTGTGCCATGAGGCC GCCGCGAAAAACAGCAGGCCGGAACAGTAG
Upstream 100 bases:
>100_bases TAGTTTCAACTAATTCATCTTGACCAGAATACGGGGGCACGCTAAAAAAATGCAGGCTGGATTGGATATAATCCAATCCT TCCGGAAAAGAAGCGGCTGC
Downstream 100 bases:
>100_bases CAATCTCATTGTCCATCACCAAACAGCGGGGCGCCCGTTTCCTTCTCCGCCAGCGGAATGGACCGCCCCCAACGGGGGAA ACGCACGGAGAAGGGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 89; Mature: 88
Protein sequence:
>89_residues MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEA AAKNSRPEQ
Sequences:
>Translated_89_residues MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEA AAKNSRPEQ >Mature_88_residues PPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQKAMEQLANIREEAQDLCHEAA AKNSRPEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9689; Mature: 9558
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQ CCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAMEQLANIREEAQDLCHEAAAKNSRPEQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure PPRPDEPNQNITMSYMNNKGLWGFVGGMIAAAIGAKVVKSPVARKLAVQGLSKAMLIQQ CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KAMEQLANIREEAQDLCHEAAAKNSRPEQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA