Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735571
Identifier: 187735571
GI number: 187735571
Start: 1286081
End: 1287277
Strand: Reverse
Name: 187735571
Synonym: Amuc_1076
Alternate gene names: NA
Gene position: 1287277-1286081 (Counterclockwise)
Preceding gene: 187735572
Following gene: 187735569
Centisome position: 48.32
GC content: 54.97
Gene sequence:
>1197_bases ATGAAATGGTACACATGCACGCCGGTGTCCTTCAAGGGAGACCATACTTTCTTTTCCCGCGATTCAGGCGCTTTCTGCAA GGCCTTTCAGAGAATCGGGGTGAAAAGCAGGGCCATCATGCCCACACCTGCCCAGGAAGGAGATGATCCCGACCTCATCC GCACGGAATACGCCAACCTGAAAGATGCAGCCTGGTGGAAATCCCTGGGTATTGACGGAGTGATCCTGTACGCCTGGGGA GTGGGCAAATACCTTCCCATCGCCAGAGCCATCCATGACGCAGGAATCTTTCTGGTAGTGTACATGGACTCATCCGGGCT GTTTTTTCCGTGGCAATACTGGCTTCCCATCGCGAAAAACATGTACACCAAAGACGTTTTCATTCACGGGAAAATCAAAG GTTCCGCTTTTTTCCTGCTGCGCCTTCTGAAACAGCACACATGGAACCTCGCCAGCAGGGGGCGCAGAAAACATTTGGAC TCAGGGGACATGGTCGCCTTCCCCATTCCGGCAGCCCTCCAATCCGTTGCAGATAGGGAATGGCTCTATGGAAAATCCAT CGTCCGGAAACTGGCTCTGGTTCCCAACCCCATTTCTTCCACCTGCCGCTTTGCAGGAGAGAAGCGCAACATCATTATGG CCGTAGGCCGCTGGGACGACCTTCTCTATAAACGCCCCTGCCTGCTGATGTCCACGCTGGAACAGGCGCTTGCCCACGCC CCGCACTGGGAAGCGGAAATTTACGGCAATATTCCTGACTTTCTCCGGGAATGGCACGACAATCTTCCGGAGCCTCTTCG CACCCGGATTCATCTGGCTGGCTATATTCCCAATATTGAACTGCAAAAGAAACAATCCCAAGCCAGAATCAGTCTCTGCA CCTCCTTGTCCGAAGGAACGCACCTTGCCTCCGCAGAAGCGCTGTGCGCCGGGGCCTCTGTCGTAGGGCCTCGCCTCACA CCCCAGCTGAACTGCCTGCAATGGTACGTTTCCCATGATTCAGGCACACTCAGCCCGAACGATTCTCCGGAAAGCCTCTC CGGGGCACTTTTGGAAGAAATCCGCGCCTGGGACTCCGGAAAACGCAACCCGGAGGAAATATCCCGCTATTGGTGTTCCC TGCTGCATGCGGAAAATTCCTGCAAACGCATTATTGCCGCCTATGAAGCCGCCCAAGGCGGAAAAACCGGCCTCTAA
Upstream 100 bases:
>100_bases TTTTGTCCTCCACATACTCCCCCGCCGCATGGCTCCGGTCCATGGAAGCCCTTCTTGGCGAGCTCCGCGTTTTCCATTCA TCTTCCACCCCACCAACATC
Downstream 100 bases:
>100_bases CTACCCGACAGGGCATGCGCCTCAATCCACACATCCTCCCATTTCCTGTCCGCCAGCGCCCCATAGAGAGGATGGCTCCA CAACCGGGCGCGCATGGCCG
Product: Glycosyltransferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MKWYTCTPVSFKGDHTFFSRDSGAFCKAFQRIGVKSRAIMPTPAQEGDDPDLIRTEYANLKDAAWWKSLGIDGVILYAWG VGKYLPIARAIHDAGIFLVVYMDSSGLFFPWQYWLPIAKNMYTKDVFIHGKIKGSAFFLLRLLKQHTWNLASRGRRKHLD SGDMVAFPIPAALQSVADREWLYGKSIVRKLALVPNPISSTCRFAGEKRNIIMAVGRWDDLLYKRPCLLMSTLEQALAHA PHWEAEIYGNIPDFLREWHDNLPEPLRTRIHLAGYIPNIELQKKQSQARISLCTSLSEGTHLASAEALCAGASVVGPRLT PQLNCLQWYVSHDSGTLSPNDSPESLSGALLEEIRAWDSGKRNPEEISRYWCSLLHAENSCKRIIAAYEAAQGGKTGL
Sequences:
>Translated_398_residues MKWYTCTPVSFKGDHTFFSRDSGAFCKAFQRIGVKSRAIMPTPAQEGDDPDLIRTEYANLKDAAWWKSLGIDGVILYAWG VGKYLPIARAIHDAGIFLVVYMDSSGLFFPWQYWLPIAKNMYTKDVFIHGKIKGSAFFLLRLLKQHTWNLASRGRRKHLD SGDMVAFPIPAALQSVADREWLYGKSIVRKLALVPNPISSTCRFAGEKRNIIMAVGRWDDLLYKRPCLLMSTLEQALAHA PHWEAEIYGNIPDFLREWHDNLPEPLRTRIHLAGYIPNIELQKKQSQARISLCTSLSEGTHLASAEALCAGASVVGPRLT PQLNCLQWYVSHDSGTLSPNDSPESLSGALLEEIRAWDSGKRNPEEISRYWCSLLHAENSCKRIIAAYEAAQGGKTGL >Mature_398_residues MKWYTCTPVSFKGDHTFFSRDSGAFCKAFQRIGVKSRAIMPTPAQEGDDPDLIRTEYANLKDAAWWKSLGIDGVILYAWG VGKYLPIARAIHDAGIFLVVYMDSSGLFFPWQYWLPIAKNMYTKDVFIHGKIKGSAFFLLRLLKQHTWNLASRGRRKHLD SGDMVAFPIPAALQSVADREWLYGKSIVRKLALVPNPISSTCRFAGEKRNIIMAVGRWDDLLYKRPCLLMSTLEQALAHA PHWEAEIYGNIPDFLREWHDNLPEPLRTRIHLAGYIPNIELQKKQSQARISLCTSLSEGTHLASAEALCAGASVVGPRLT PQLNCLQWYVSHDSGTLSPNDSPESLSGALLEEIRAWDSGKRNPEEISRYWCSLLHAENSCKRIIAAYEAAQGGKTGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44710; Mature: 44710
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWYTCTPVSFKGDHTFFSRDSGAFCKAFQRIGVKSRAIMPTPAQEGDDPDLIRTEYANL CCEEEECCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCC KDAAWWKSLGIDGVILYAWGVGKYLPIARAIHDAGIFLVVYMDSSGLFFPWQYWLPIAKN HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCEECHHHHHHHHHC MYTKDVFIHGKIKGSAFFLLRLLKQHTWNLASRGRRKHLDSGDMVAFPIPAALQSVADRE CEECEEEEEEEECCHHHHHHHHHHHHHHCHHHCCHHHCCCCCCEEEEECHHHHHHHHHHH WLYGKSIVRKLALVPNPISSTCRFAGEKRNIIMAVGRWDDLLYKRPCLLMSTLEQALAHA HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHCHHHHHHHHHHHHHCC PHWEAEIYGNIPDFLREWHDNLPEPLRTRIHLAGYIPNIELQKKQSQARISLCTSLSEGT CCCCEEECCCCHHHHHHHHHCCCHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCC HLASAEALCAGASVVGPRLTPQLNCLQWYVSHDSGTLSPNDSPESLSGALLEEIRAWDSG CHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC KRNPEEISRYWCSLLHAENSCKRIIAAYEAAQGGKTGL CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKWYTCTPVSFKGDHTFFSRDSGAFCKAFQRIGVKSRAIMPTPAQEGDDPDLIRTEYANL CCEEEECCCCCCCCCCEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCC KDAAWWKSLGIDGVILYAWGVGKYLPIARAIHDAGIFLVVYMDSSGLFFPWQYWLPIAKN HHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCCEEEEEEECCCCCEECHHHHHHHHHC MYTKDVFIHGKIKGSAFFLLRLLKQHTWNLASRGRRKHLDSGDMVAFPIPAALQSVADRE CEECEEEEEEEECCHHHHHHHHHHHHHHCHHHCCHHHCCCCCCEEEEECHHHHHHHHHHH WLYGKSIVRKLALVPNPISSTCRFAGEKRNIIMAVGRWDDLLYKRPCLLMSTLEQALAHA HHHHHHHHHHHHHCCCCHHHHHHHCCCCCCEEEEEECHHHHHHHCHHHHHHHHHHHHHCC PHWEAEIYGNIPDFLREWHDNLPEPLRTRIHLAGYIPNIELQKKQSQARISLCTSLSEGT CCCCEEECCCCHHHHHHHHHCCCHHHHHHEEEEECCCCCEEHHHHHHHHHHHHHHHCCCC HLASAEALCAGASVVGPRLTPQLNCLQWYVSHDSGTLSPNDSPESLSGALLEEIRAWDSG CHHHHHHHHCCCHHCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCC KRNPEEISRYWCSLLHAENSCKRIIAAYEAAQGGKTGL CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA