Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is pkn1 [H]
Identifier: 187735490
GI number: 187735490
Start: 1185518
End: 1186723
Strand: Reverse
Name: pkn1 [H]
Synonym: Amuc_0993
Alternate gene names: 187735490
Gene position: 1186723-1185518 (Counterclockwise)
Preceding gene: 187735491
Following gene: 187735488
Centisome position: 44.54
GC content: 61.36
Gene sequence:
>1206_bases ATGCGCGGCATTTTCCTTGTTTCCTGCTTTCTGGGAGGAAGCGTCCTGCTGGCCGGGTGCCGGGAAGAAAATAATTCCCC CCGCCCGGCCACGGAAGATGCCGCGCGCATTACCAGCGCACGCCAGTGGGGAGAAAGCCGATCCGCGCTGCAAAAACGGG AACTGGACCGCGCTGCCGGTCCTGCCCTTCCCATTCCGGATGACCTGCCGTCCCGGGAGCTGGTCGGCACGACGCGCCAA ATCCATCAGCTCATTGAAGCTTCCGGAAATCCGGCACGTTTTGAATCCTACACGGAAACGGTTCCCGCGGCGGGAGCTTC CCTGCGCATGGTCGCCATACCGGGAGGAACGTTCCTCATGGGGAGTACCGCGGAAGAGCCGCACCGGAAACCGGACGAAG GACCGCAGCATAAAGTGAGCATCTCTCCCTTCTGGATCTCGGAAACGGAAATCCCCTGGGAACTTTATACGGCCTTCATG GAAAACGGGCGTCCGCGCGCCAAGGACGGTCAGCTTCTGGAGGAACAGCCGGATGACGAACTGTGGGACTCCGTTACGCA GCCTACCGCCCCCTACACCGCCATGAACCTGGGCATGGGTCACGGCTATGAACACGGTCTGCCCGCCATCTCCATGTCCC ACCACGCCGCCAGCAAATTCTGCGAATGGCTGAGCGCCCAGACCGGGCATTACTACCGCCTGCCCACGGAGGCGGAATGG GAATACGCCTGCCGGGCCGGCTCCCCCGGCGCCTATTCTTACGGAAACGGGGAAGCCTCTCTGGACCAGTACGCCTGGTA CTGGAACAACTCCAATGACCGCTACCAGAAAACAGGCTCTAAAAAACCAAATAAGTGGGGACTCCGGGACATGCACGGAA ATGTGGCGGAATGGGTTTTGGACTCTTACGTTCCGGATGCCTACGGCAAACGGAGCGGCTTGCCCGCGAAAGACCCCCTG GTCATCATCCCCGGCGCCCCTCACATCGTTCGCGGCGGTTCGTGGGAAGACGACCCGGACAGCCTGAGAAGCGCTGCGCG CCGCGCCAGCACCCCTGCCTGGAACCGTCAGGATCCTCAAAACCCTAAAAGCATCTGGTACCTGACGGACGGAGGCATGA TCGGGTTCCGCGTGGTGCGCCCCATGAACATTCCGGACGTTATGACGATGCACCGCCTCTGGAATTTCTCCAAGGGGGAG CCGTAA
Upstream 100 bases:
>100_bases CGGCCTTCCTTGCCTCTGACGATGCCCGTTACATCACCGGGCAGGTCATTGCCTGCGACGGAGGCATGACGATGTAGGGC ATTCCGGTTTTCACCATTCC
Downstream 100 bases:
>100_bases AGAACAACCCTTCATGATCATTGCATTAAGAACGGAACATGTCACGAGAGAAGCGCTCTGGAACTATTTCGTCCCCGGCT GCAATGAACATTACCTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MRGIFLVSCFLGGSVLLAGCREENNSPRPATEDAARITSARQWGESRSALQKRELDRAAGPALPIPDDLPSRELVGTTRQ IHQLIEASGNPARFESYTETVPAAGASLRMVAIPGGTFLMGSTAEEPHRKPDEGPQHKVSISPFWISETEIPWELYTAFM ENGRPRAKDGQLLEEQPDDELWDSVTQPTAPYTAMNLGMGHGYEHGLPAISMSHHAASKFCEWLSAQTGHYYRLPTEAEW EYACRAGSPGAYSYGNGEASLDQYAWYWNNSNDRYQKTGSKKPNKWGLRDMHGNVAEWVLDSYVPDAYGKRSGLPAKDPL VIIPGAPHIVRGGSWEDDPDSLRSAARRASTPAWNRQDPQNPKSIWYLTDGGMIGFRVVRPMNIPDVMTMHRLWNFSKGE P
Sequences:
>Translated_401_residues MRGIFLVSCFLGGSVLLAGCREENNSPRPATEDAARITSARQWGESRSALQKRELDRAAGPALPIPDDLPSRELVGTTRQ IHQLIEASGNPARFESYTETVPAAGASLRMVAIPGGTFLMGSTAEEPHRKPDEGPQHKVSISPFWISETEIPWELYTAFM ENGRPRAKDGQLLEEQPDDELWDSVTQPTAPYTAMNLGMGHGYEHGLPAISMSHHAASKFCEWLSAQTGHYYRLPTEAEW EYACRAGSPGAYSYGNGEASLDQYAWYWNNSNDRYQKTGSKKPNKWGLRDMHGNVAEWVLDSYVPDAYGKRSGLPAKDPL VIIPGAPHIVRGGSWEDDPDSLRSAARRASTPAWNRQDPQNPKSIWYLTDGGMIGFRVVRPMNIPDVMTMHRLWNFSKGE P >Mature_401_residues MRGIFLVSCFLGGSVLLAGCREENNSPRPATEDAARITSARQWGESRSALQKRELDRAAGPALPIPDDLPSRELVGTTRQ IHQLIEASGNPARFESYTETVPAAGASLRMVAIPGGTFLMGSTAEEPHRKPDEGPQHKVSISPFWISETEIPWELYTAFM ENGRPRAKDGQLLEEQPDDELWDSVTQPTAPYTAMNLGMGHGYEHGLPAISMSHHAASKFCEWLSAQTGHYYRLPTEAEW EYACRAGSPGAYSYGNGEASLDQYAWYWNNSNDRYQKTGSKKPNKWGLRDMHGNVAEWVLDSYVPDAYGKRSGLPAKDPL VIIPGAPHIVRGGSWEDDPDSLRSAARRASTPAWNRQDPQNPKSIWYLTDGGMIGFRVVRPMNIPDVMTMHRLWNFSKGE P
Specific function: Together with the serine/threonine kinase pknD, may play a role in the specific interactions with host proteins during intracellular growth [H]
COG id: COG1262
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
Organism=Homo sapiens, GI194248087, Length=280, Percent_Identity=26.7857142857143, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI194248088, Length=290, Percent_Identity=25.5172413793103, Blast_Score=68, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016187 - InterPro: IPR011009 - InterPro: IPR000719 - InterPro: IPR017442 - InterPro: IPR005532 [H]
Pfam domain/function: PF03781 DUF323; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 44572; Mature: 44572
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGIFLVSCFLGGSVLLAGCREENNSPRPATEDAARITSARQWGESRSALQKRELDRAAG CCCEEEEHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALPIPDDLPSRELVGTTRQIHQLIEASGNPARFESYTETVPAAGASLRMVAIPGGTFLM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEE GSTAEEPHRKPDEGPQHKVSISPFWISETEIPWELYTAFMENGRPRAKDGQLLEEQPDDE CCCCCCCCCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHH LWDSVTQPTAPYTAMNLGMGHGYEHGLPAISMSHHAASKFCEWLSAQTGHYYRLPTEAEW HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCC EYACRAGSPGAYSYGNGEASLDQYAWYWNNSNDRYQKTGSKKPNKWGLRDMHGNVAEWVL HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHCCCHHHHHH DSYVPDAYGKRSGLPAKDPLVIIPGAPHIVRGGSWEDDPDSLRSAARRASTPAWNRQDPQ HHHCCCHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCC NPKSIWYLTDGGMIGFRVVRPMNIPDVMTMHRLWNFSKGEP CCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC >Mature Secondary Structure MRGIFLVSCFLGGSVLLAGCREENNSPRPATEDAARITSARQWGESRSALQKRELDRAAG CCCEEEEHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PALPIPDDLPSRELVGTTRQIHQLIEASGNPARFESYTETVPAAGASLRMVAIPGGTFLM CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCEEE GSTAEEPHRKPDEGPQHKVSISPFWISETEIPWELYTAFMENGRPRAKDGQLLEEQPDDE CCCCCCCCCCCCCCCCCEEEECEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHH LWDSVTQPTAPYTAMNLGMGHGYEHGLPAISMSHHAASKFCEWLSAQTGHYYRLPTEAEW HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEEECCCCCCC EYACRAGSPGAYSYGNGEASLDQYAWYWNNSNDRYQKTGSKKPNKWGLRDMHGNVAEWVL HHHCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHCCCHHHHHH DSYVPDAYGKRSGLPAKDPLVIIPGAPHIVRGGSWEDDPDSLRSAARRASTPAWNRQDPQ HHHCCCHHCCCCCCCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCC NPKSIWYLTDGGMIGFRVVRPMNIPDVMTMHRLWNFSKGEP CCCEEEEEECCCEEEEEEECCCCCCHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]