Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735399

Identifier: 187735399

GI number: 187735399

Start: 1070019

End: 1070456

Strand: Reverse

Name: 187735399

Synonym: Amuc_0897

Alternate gene names: NA

Gene position: 1070456-1070019 (Counterclockwise)

Preceding gene: 187735402

Following gene: 187735397

Centisome position: 40.18

GC content: 60.27

Gene sequence:

>438_bases
ATGATGAAAACCGGTTTTTCTTTCGTTCTTCTTCCTTCCTGCCTCGTGCTGCTGGCAGCCTGCTCCCCAGCACCGTCCGA
CCGCATTGCGAAGAATATGCCGGCTTATGAACAGCTCCCGAAGGAGCATCAGGCCAAAGTGGCGCGCGGGGAGCTGGAAA
AAGGAATGTCTCCCATGGCGGTTCTGCTGGCATGGGGGGAACCCGAACAGAAAATGGCGGGCAGGATGAACGGGAAGAAT
ACGGAACGGTGGATTTACACGCGGAGCGGCACGGGCTGGTCCCTGGGCCTGGGCGGAGGAGGATTCCGGGGCAGGGATTC
CGGCATAGGCACCGGGATAGGCGTCACGATGCCCCTGGGCAGCCGCCCGCCCGTCTCCTGCAATGTCCTGTTTGAAGACG
GGAAGGTCATCGGCTGGGAAGCCGTCAATGGCTTTTAA

Upstream 100 bases:

>100_bases
AGCGCGCTTTTATGTCAAAATAACGGATTCCCTCATCTCCATTTTTCCGAAAAGCCGCTCTGCCACCTTGCCTGCCATCC
GCCGCCGTGCTATTTACGGG

Downstream 100 bases:

>100_bases
ACGGCGTTCCCCGCCTTGTATTTCCCATCTGCCCGGCCCGGCGTTTCACGCCGTCCGCGCCGTTTTCCCTATTTGCCGGC
GGCCTTGACGATGGCTTCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MMKTGFSFVLLPSCLVLLAACSPAPSDRIAKNMPAYEQLPKEHQAKVARGELEKGMSPMAVLLAWGEPEQKMAGRMNGKN
TERWIYTRSGTGWSLGLGGGGFRGRDSGIGTGIGVTMPLGSRPPVSCNVLFEDGKVIGWEAVNGF

Sequences:

>Translated_145_residues
MMKTGFSFVLLPSCLVLLAACSPAPSDRIAKNMPAYEQLPKEHQAKVARGELEKGMSPMAVLLAWGEPEQKMAGRMNGKN
TERWIYTRSGTGWSLGLGGGGFRGRDSGIGTGIGVTMPLGSRPPVSCNVLFEDGKVIGWEAVNGF
>Mature_145_residues
MMKTGFSFVLLPSCLVLLAACSPAPSDRIAKNMPAYEQLPKEHQAKVARGELEKGMSPMAVLLAWGEPEQKMAGRMNGKN
TERWIYTRSGTGWSLGLGGGGFRGRDSGIGTGIGVTMPLGSRPPVSCNVLFEDGKVIGWEAVNGF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15473; Mature: 15473

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKTGFSFVLLPSCLVLLAACSPAPSDRIAKNMPAYEQLPKEHQAKVARGELEKGMSPMA
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCEE
VLLAWGEPEQKMAGRMNGKNTERWIYTRSGTGWSLGLGGGGFRGRDSGIGTGIGVTMPLG
EEEECCCCHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEECCC
SRPPVSCNVLFEDGKVIGWEAVNGF
CCCCCEEEEEEECCCEEEEEECCCC
>Mature Secondary Structure
MMKTGFSFVLLPSCLVLLAACSPAPSDRIAKNMPAYEQLPKEHQAKVARGELEKGMSPMA
CCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHHCCHHHHHHHHHHHHHCCCCCEE
VLLAWGEPEQKMAGRMNGKNTERWIYTRSGTGWSLGLGGGGFRGRDSGIGTGIGVTMPLG
EEEECCCCHHHHHCCCCCCCCCEEEEEECCCCEEEECCCCCCCCCCCCCCCCCEEEECCC
SRPPVSCNVLFEDGKVIGWEAVNGF
CCCCCEEEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA