Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735397
Identifier: 187735397
GI number: 187735397
Start: 1067831
End: 1068289
Strand: Reverse
Name: 187735397
Synonym: Amuc_0895
Alternate gene names: NA
Gene position: 1068289-1067831 (Counterclockwise)
Preceding gene: 187735399
Following gene: 187735396
Centisome position: 40.1
GC content: 58.17
Gene sequence:
>459_bases ATGAATATTTCACGCACCCTTACAGCTACTCTTGCCGCGGCATTCACTTTGCCCGCCCTGGCGGATATCCCGGCCTCCCG CGTTCCCGCCCCCGTGAAAGAGCAGGTACAGAAGCAGTATCCGAACGCAGGCGCCATTGAATGGGATTTCGACAATGACG AAGATGTCTATGAAGCCGAATTCCACCTCAATGGACTGGAATACGAGGTGAAATTGTATCCCGACGGCACTGTCAGCCTG GTTAAGGCGGATATTTCCCTCCAGCATCTTCCAGCCCCCGTTACGGCGGCCATCGCCCGCGATTTCCCGGGGTATGCCCT CCGCCGCGCCAGGCAGATTACCGCCCGGGGAGTCCTGAAGTACCGGGTGGACTGCCGGTCCGAATCCCCCGCCGTGCGCA AAGTGGAGCTTTATTATTCGCCGGACGGCAAGCTCCTCTCCCAAAAAACGGATGATTGA
Upstream 100 bases:
>100_bases AACCCCGCCATGCCCGGATTCATTTCATTGATGGCTAAATTGTCACAAAACATCCGCAAAAGATTCTTGTTTTTTTAATA AATACAATTATTCCGTATTT
Downstream 100 bases:
>100_bases ATTCTCCGTTTTTCCGCACATTTCCGTATGACAGAAGCCGGGGGACTCCCTCCGGAGGCTGACACGGCACCCTCTGGATT CAACAAAGCCTGATGATATA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 152; Mature: 152
Protein sequence:
>152_residues MNISRTLTATLAAAFTLPALADIPASRVPAPVKEQVQKQYPNAGAIEWDFDNDEDVYEAEFHLNGLEYEVKLYPDGTVSL VKADISLQHLPAPVTAAIARDFPGYALRRARQITARGVLKYRVDCRSESPAVRKVELYYSPDGKLLSQKTDD
Sequences:
>Translated_152_residues MNISRTLTATLAAAFTLPALADIPASRVPAPVKEQVQKQYPNAGAIEWDFDNDEDVYEAEFHLNGLEYEVKLYPDGTVSL VKADISLQHLPAPVTAAIARDFPGYALRRARQITARGVLKYRVDCRSESPAVRKVELYYSPDGKLLSQKTDD >Mature_152_residues MNISRTLTATLAAAFTLPALADIPASRVPAPVKEQVQKQYPNAGAIEWDFDNDEDVYEAEFHLNGLEYEVKLYPDGTVSL VKADISLQHLPAPVTAAIARDFPGYALRRARQITARGVLKYRVDCRSESPAVRKVELYYSPDGKLLSQKTDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16866; Mature: 16866
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNISRTLTATLAAAFTLPALADIPASRVPAPVKEQVQKQYPNAGAIEWDFDNDEDVYEAE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEE FHLNGLEYEVKLYPDGTVSLVKADISLQHLPAPVTAAIARDFPGYALRRARQITARGVLK EEECCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEE YRVDCRSESPAVRKVELYYSPDGKLLSQKTDD EEEECCCCCCCEEEEEEEECCCCCEECCCCCC >Mature Secondary Structure MNISRTLTATLAAAFTLPALADIPASRVPAPVKEQVQKQYPNAGAIEWDFDNDEDVYEAE CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCEEEEE FHLNGLEYEVKLYPDGTVSLVKADISLQHLPAPVTAAIARDFPGYALRRARQITARGVLK EEECCEEEEEEECCCCCEEEEEECCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCEEE YRVDCRSESPAVRKVELYYSPDGKLLSQKTDD EEEECCCCCCCEEEEEEEECCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA