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The map label for this gene is recN [H]

Identifier: 187735379

GI number: 187735379

Start: 1047672

End: 1049330

Strand: Reverse

Name: recN [H]

Synonym: Amuc_0877

Alternate gene names: 187735379

Gene position: 1049330-1047672 (Counterclockwise)

Preceding gene: 187735386

Following gene: 187735377

Centisome position: 39.39

GC content: 62.63

Gene sequence:

>1659_bases
ATGCTTACATTGCTGAAAATTAAAAACCTGGCCCTTGTGGACCAGCTGCTCTGGGAACCCAGTTCCGGATTCATCTGCAT
CACGGGGGAAACCGGGGCGGGGAAATCCGTCATCATTGGAGCCATACGCCTGGCGCTGGGAGAACGGGCGGACAAGACGC
TCATCCGCTCCGGGGAACAGCAATGCAGCGTGGAAGCTGTGTTCCATCTGCCGGAATCCTCCCCCGTGCACGCCATTCTG
AACGAGCATGGCGTCCCGCCCTGCGAAGACGGCAACCTGATTATCAAGCGCCTCATCTCTTCCACGGCCAACCGCCAGTT
CCTGAACGACAGCCCGTGCACCCTGAATCTGCTGAGGGAAGCGGGAGCCTGCCTGGTGGACATGCATGGCCCCAGCGACC
ACCGCTCCCTGGTCTCCCAGGAAAGGCAGCTTTCCCTGCTGGACGCCTTCGGGGAGCACGCTCCCCTGGTGCACTCCTAT
TCGGACGCCTGGAGGCAATGGCAGGATGCGCGCCGGGCCTATGATGACCTGGAACATGCGGAAGCGGCCACCGCACGGGA
AATAGAACTGCTGCGCCACCAGGTGGATGAAATAGATTCCGCCGCCTTCACTCCGGAAGAAGTGCTCACGCTGGAAGAAC
GCTGGCAGCGCGCCCGCAACGGCACCCGGCTCCGGGAACAGGTCTCCAAAATGCTTTCCATGCTGGAGGAAACGGATGTG
CCCGGCCTGGGGACCCAATTGAGGGAATTGACACGGGCGGCCCATGAGCTGGAACGCATGGACGCCTCCACCGCCGCGTG
GCTGGCTCCATTGGCGGGAGTGAATTTGGAACTCAAGGAAATTGAGGGACGCCTGGCGGATTATTCCGCCGAACTGGACT
GCGACCCCCGGGAACTTTTCCAGCTGGAGGAACGCATCAACCTGCTGGAATCTCTGAAAATGAAATACGGCCCCTCCTTT
GAGGACGTCTGTTCCCGGAGGGAGGAGGCGGCCAGCCGCCTGGACCGCATTGAACACCGCACGGAACGCCTGGAAGAGCT
GAGGGCCTCCATCGCCGCCCTGCGCAAGCAGATGGACGCCGCCGGGCAGGCTCTGACCAGAGCGCGCCAGGACTCCGCGC
CCAGGCTGGCGGCTTCCATCGTCAGGCACTCCCGGGAGCTGGGATTCCGCCAGGCCGTCTTTGAAGTGAGCCTCTCCCCC
CTTCAGGAACCGGGCTCACAGGGAATGGAAACGGTGGAATTCCTGTTTGGCCCCAATCCCGGAGAACCCTCCAAGCCTCT
CCGTCTGATTGCCTCCAGCGGGGAACTGGCGCGCATCATGCTGGCGATTAAAAGCGCCCTGGCCCACAAGGATGCCACCC
CCCTGCTGGTATTTGACGAAATAGACGCCAACGTGGGCGGAGAAGTGGCGCGGGCTGTGGGATTCAAGATGCAGCAGCTC
GGAAACAGGCACCAGGTGATCTCCATCACGCACTTCCCGCAGGTGGCGGCCCTGGCCTCCCATCATTACCTGGTTCAGAA
AGCATCCGCGGGCAACCGCACCATCTCCTGCCTGCGGGAGGTGAGCCATGAAGAACGGGTGGATGAACTGGTCCGCATGC
TGGGCGGCGGCGGAGACCACGCACGCACGCTGGCCCAGGCCCTGCTGCAGCCCTCCTGA

Upstream 100 bases:

>100_bases
GGTGGACGTTCCTGTGCCCAAAAAGAGAATGTTCATCACAGAGGTCATGATTGCGTTTAGGGCAAATGATGCCATAATGC
ATTCAAAATCCAAAGCCCGA

Downstream 100 bases:

>100_bases
ACGGGAAATGCCGGTGGGGGAGAGGCCGCCCTATTTCCCCAGGCCCCCCAGGCGTGGGGTGAACCCCCGCAGCCTCAGGG
AATTGAATACGACGCACAGG

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 552; Mature: 552

Protein sequence:

>552_residues
MLTLLKIKNLALVDQLLWEPSSGFICITGETGAGKSVIIGAIRLALGERADKTLIRSGEQQCSVEAVFHLPESSPVHAIL
NEHGVPPCEDGNLIIKRLISSTANRQFLNDSPCTLNLLREAGACLVDMHGPSDHRSLVSQERQLSLLDAFGEHAPLVHSY
SDAWRQWQDARRAYDDLEHAEAATAREIELLRHQVDEIDSAAFTPEEVLTLEERWQRARNGTRLREQVSKMLSMLEETDV
PGLGTQLRELTRAAHELERMDASTAAWLAPLAGVNLELKEIEGRLADYSAELDCDPRELFQLEERINLLESLKMKYGPSF
EDVCSRREEAASRLDRIEHRTERLEELRASIAALRKQMDAAGQALTRARQDSAPRLAASIVRHSRELGFRQAVFEVSLSP
LQEPGSQGMETVEFLFGPNPGEPSKPLRLIASSGELARIMLAIKSALAHKDATPLLVFDEIDANVGGEVARAVGFKMQQL
GNRHQVISITHFPQVAALASHHYLVQKASAGNRTISCLREVSHEERVDELVRMLGGGGDHARTLAQALLQPS

Sequences:

>Translated_552_residues
MLTLLKIKNLALVDQLLWEPSSGFICITGETGAGKSVIIGAIRLALGERADKTLIRSGEQQCSVEAVFHLPESSPVHAIL
NEHGVPPCEDGNLIIKRLISSTANRQFLNDSPCTLNLLREAGACLVDMHGPSDHRSLVSQERQLSLLDAFGEHAPLVHSY
SDAWRQWQDARRAYDDLEHAEAATAREIELLRHQVDEIDSAAFTPEEVLTLEERWQRARNGTRLREQVSKMLSMLEETDV
PGLGTQLRELTRAAHELERMDASTAAWLAPLAGVNLELKEIEGRLADYSAELDCDPRELFQLEERINLLESLKMKYGPSF
EDVCSRREEAASRLDRIEHRTERLEELRASIAALRKQMDAAGQALTRARQDSAPRLAASIVRHSRELGFRQAVFEVSLSP
LQEPGSQGMETVEFLFGPNPGEPSKPLRLIASSGELARIMLAIKSALAHKDATPLLVFDEIDANVGGEVARAVGFKMQQL
GNRHQVISITHFPQVAALASHHYLVQKASAGNRTISCLREVSHEERVDELVRMLGGGGDHARTLAQALLQPS
>Mature_552_residues
MLTLLKIKNLALVDQLLWEPSSGFICITGETGAGKSVIIGAIRLALGERADKTLIRSGEQQCSVEAVFHLPESSPVHAIL
NEHGVPPCEDGNLIIKRLISSTANRQFLNDSPCTLNLLREAGACLVDMHGPSDHRSLVSQERQLSLLDAFGEHAPLVHSY
SDAWRQWQDARRAYDDLEHAEAATAREIELLRHQVDEIDSAAFTPEEVLTLEERWQRARNGTRLREQVSKMLSMLEETDV
PGLGTQLRELTRAAHELERMDASTAAWLAPLAGVNLELKEIEGRLADYSAELDCDPRELFQLEERINLLESLKMKYGPSF
EDVCSRREEAASRLDRIEHRTERLEELRASIAALRKQMDAAGQALTRARQDSAPRLAASIVRHSRELGFRQAVFEVSLSP
LQEPGSQGMETVEFLFGPNPGEPSKPLRLIASSGELARIMLAIKSALAHKDATPLLVFDEIDANVGGEVARAVGFKMQQL
GNRHQVISITHFPQVAALASHHYLVQKASAGNRTISCLREVSHEERVDELVRMLGGGGDHARTLAQALLQPS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=553, Percent_Identity=32.1880650994575, Blast_Score=257, Evalue=1e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61112; Mature: 61112

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLLKIKNLALVDQLLWEPSSGFICITGETGAGKSVIIGAIRLALGERADKTLIRSGEQ
CEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCH
QCSVEAVFHLPESSPVHAILNEHGVPPCEDGNLIIKRLISSTANRQFLNDSPCTLNLLRE
HCCHHHEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
AGACLVDMHGPSDHRSLVSQERQLSLLDAFGEHAPLVHSYSDAWRQWQDARRAYDDLEHA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAATAREIELLRHQVDEIDSAAFTPEEVLTLEERWQRARNGTRLREQVSKMLSMLEETDV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PGLGTQLRELTRAAHELERMDASTAAWLAPLAGVNLELKEIEGRLADYSAELDCDPRELF
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCHHHHH
QLEERINLLESLKMKYGPSFEDVCSRREEAASRLDRIEHRTERLEELRASIAALRKQMDA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQALTRARQDSAPRLAASIVRHSRELGFRQAVFEVSLSPLQEPGSQGMETVEFLFGPNP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
GEPSKPLRLIASSGELARIMLAIKSALAHKDATPLLVFDEIDANVGGEVARAVGFKMQQL
CCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
GNRHQVISITHFPQVAALASHHYLVQKASAGNRTISCLREVSHEERVDELVRMLGGGGDH
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ARTLAQALLQPS
HHHHHHHHCCCC
>Mature Secondary Structure
MLTLLKIKNLALVDQLLWEPSSGFICITGETGAGKSVIIGAIRLALGERADKTLIRSGEQ
CEEEEEHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHCHHHHHHHHCCCH
QCSVEAVFHLPESSPVHAILNEHGVPPCEDGNLIIKRLISSTANRQFLNDSPCTLNLLRE
HCCHHHEEECCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
AGACLVDMHGPSDHRSLVSQERQLSLLDAFGEHAPLVHSYSDAWRQWQDARRAYDDLEHA
CCCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
EAATAREIELLRHQVDEIDSAAFTPEEVLTLEERWQRARNGTRLREQVSKMLSMLEETDV
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
PGLGTQLRELTRAAHELERMDASTAAWLAPLAGVNLELKEIEGRLADYSAELDCDPRELF
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCHHHHH
QLEERINLLESLKMKYGPSFEDVCSRREEAASRLDRIEHRTERLEELRASIAALRKQMDA
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQALTRARQDSAPRLAASIVRHSRELGFRQAVFEVSLSPLQEPGSQGMETVEFLFGPNP
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
GEPSKPLRLIASSGELARIMLAIKSALAHKDATPLLVFDEIDANVGGEVARAVGFKMQQL
CCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHC
GNRHQVISITHFPQVAALASHHYLVQKASAGNRTISCLREVSHEERVDELVRMLGGGGDH
CCCCCEEEEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ARTLAQALLQPS
HHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]