Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735328
Identifier: 187735328
GI number: 187735328
Start: 974026
End: 975036
Strand: Reverse
Name: 187735328
Synonym: Amuc_0826
Alternate gene names: NA
Gene position: 975036-974026 (Counterclockwise)
Preceding gene: 187735335
Following gene: 187735327
Centisome position: 36.6
GC content: 49.46
Gene sequence:
>1011_bases ATGTTTATCAATCCGGTACATTGTCTGCCAGCCTCTCTCTGCGCATGCGCGTTGCTTCCGGCAACAATCGCCTCCCTGCA TGCGGAAACGGCTTACAGTACGCCCTGCGGCTATATCCAGACAACCCTGTACGCCAAAGCAACGGGTTATCTGGGTTTAG GGGTGCATCCGGAAGCCTTGGTACAGCACACCCTTGAAGAAGGCAACATTACCATTTCCGGTAATAAAGTCACCATCACG GACCCGGACGTTAATTTCAACGACCTGATGAATGAAAACTCCGCCTATGTGCTGGTTCTTCACTTCGGCAATGAAGTTAT AGCTCTTCCCTTAAACCGGGATGGTTGGAAAAAACCGGGAGCCAGCTGGACGGAGCATTCCATTAAAGTGAATGACCGCC TTCTTTCTGATCTGGTAAGCAAGGGCACTCCCCCCGATTCATATGTCCTGCGCAAGGCGCGCACTCTGGATGATATTCTT GGAGAAGACAACCAGTTTGGCCTGAAAAGCGGCTCCGCCATGTCTGCAGACACGGTTAATATCTTTAATTCGGCAACCAC CAAGCTTGCCGCTTATTATTCTGGAAATGAATGGAGAAGAAGGGGATCTACGGAAAATATCGGCAGTATGCCGGTGTTCA GCCATGAACCCCTGACCATTACGCGCAAAGCTGGTTCCGATGTTACAGCTGTGGTCATTGGGGAAGTATCCCTGAAGAAT CAGAAGCTGGTCGTTCCCACATTCAATTCCCTTCTTCACACTCGCCTGCCCCTTTCCCAGACTTTGGCTGAAATAGCTTT GCAATTGCCTGATGACGCCGTCATCAACATTCCCGCAGATGACAAAAATGCCATGGTCAAGGTCGTCAACAACAACGGTT CCTGGAAACGTCAGGACAATGGAGAGGATGTTTCCAATATCCCCTTCAGCGGAGTTTTTTCCATCTACTACGAATCTTCC AAGACACCTTCCTACATCACGGTGTCCAGCAAACATCAAACCAACAAATAA
Upstream 100 bases:
>100_bases GAAAGCTTCCTCCATCCGGGGAAAAGTCTGACAAATGAAAAACGGGAATGTTTCCCCCTTTCCTAATTGACAAACGATTT CCTTTCTTCTTAATGGGTTA
Downstream 100 bases:
>100_bases CCAGCCATGTTCTATCGCTCCCTTTTCACCAATGCTTTCACCGCCTGCGCTCTCTTTTCTGGAGAAATTGCCTTAGCGGA CAGTTTCAATATCAGCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MFINPVHCLPASLCACALLPATIASLHAETAYSTPCGYIQTTLYAKATGYLGLGVHPEALVQHTLEEGNITISGNKVTIT DPDVNFNDLMNENSAYVLVLHFGNEVIALPLNRDGWKKPGASWTEHSIKVNDRLLSDLVSKGTPPDSYVLRKARTLDDIL GEDNQFGLKSGSAMSADTVNIFNSATTKLAAYYSGNEWRRRGSTENIGSMPVFSHEPLTITRKAGSDVTAVVIGEVSLKN QKLVVPTFNSLLHTRLPLSQTLAEIALQLPDDAVINIPADDKNAMVKVVNNNGSWKRQDNGEDVSNIPFSGVFSIYYESS KTPSYITVSSKHQTNK
Sequences:
>Translated_336_residues MFINPVHCLPASLCACALLPATIASLHAETAYSTPCGYIQTTLYAKATGYLGLGVHPEALVQHTLEEGNITISGNKVTIT DPDVNFNDLMNENSAYVLVLHFGNEVIALPLNRDGWKKPGASWTEHSIKVNDRLLSDLVSKGTPPDSYVLRKARTLDDIL GEDNQFGLKSGSAMSADTVNIFNSATTKLAAYYSGNEWRRRGSTENIGSMPVFSHEPLTITRKAGSDVTAVVIGEVSLKN QKLVVPTFNSLLHTRLPLSQTLAEIALQLPDDAVINIPADDKNAMVKVVNNNGSWKRQDNGEDVSNIPFSGVFSIYYESS KTPSYITVSSKHQTNK >Mature_336_residues MFINPVHCLPASLCACALLPATIASLHAETAYSTPCGYIQTTLYAKATGYLGLGVHPEALVQHTLEEGNITISGNKVTIT DPDVNFNDLMNENSAYVLVLHFGNEVIALPLNRDGWKKPGASWTEHSIKVNDRLLSDLVSKGTPPDSYVLRKARTLDDIL GEDNQFGLKSGSAMSADTVNIFNSATTKLAAYYSGNEWRRRGSTENIGSMPVFSHEPLTITRKAGSDVTAVVIGEVSLKN QKLVVPTFNSLLHTRLPLSQTLAEIALQLPDDAVINIPADDKNAMVKVVNNNGSWKRQDNGEDVSNIPFSGVFSIYYESS KTPSYITVSSKHQTNK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36525; Mature: 36525
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFINPVHCLPASLCACALLPATIASLHAETAYSTPCGYIQTTLYAKATGYLGLGVHPEAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCEEECCCCHHHH VQHTLEEGNITISGNKVTITDPDVNFNDLMNENSAYVLVLHFGNEVIALPLNRDGWKKPG HHHHHHCCCEEEECCEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCC ASWTEHSIKVNDRLLSDLVSKGTPPDSYVLRKARTLDDILGEDNQFGLKSGSAMSADTVN CCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE IFNSATTKLAAYYSGNEWRRRGSTENIGSMPVFSHEPLTITRKAGSDVTAVVIGEVSLKN HHCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECC QKLVVPTFNSLLHTRLPLSQTLAEIALQLPDDAVINIPADDKNAMVKVVNNNGSWKRQDN CEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCC GEDVSNIPFSGVFSIYYESSKTPSYITVSSKHQTNK CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCC >Mature Secondary Structure MFINPVHCLPASLCACALLPATIASLHAETAYSTPCGYIQTTLYAKATGYLGLGVHPEAL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEEEECCEEECCCCHHHH VQHTLEEGNITISGNKVTITDPDVNFNDLMNENSAYVLVLHFGNEVIALPLNRDGWKKPG HHHHHHCCCEEEECCEEEEECCCCCHHHHHCCCCCEEEEEEECCEEEEEECCCCCCCCCC ASWTEHSIKVNDRLLSDLVSKGTPPDSYVLRKARTLDDILGEDNQFGLKSGSAMSADTVN CCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEE IFNSATTKLAAYYSGNEWRRRGSTENIGSMPVFSHEPLTITRKAGSDVTAVVIGEVSLKN HHCCCCEEEEEEECCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEECC QKLVVPTFNSLLHTRLPLSQTLAEIALQLPDDAVINIPADDKNAMVKVVNNNGSWKRQDN CEEEEECHHHHHHHCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEEECCCCCCCCCC GEDVSNIPFSGVFSIYYESSKTPSYITVSSKHQTNK CCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA