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The map label for this gene is ydeP [H]

Identifier: 187735304

GI number: 187735304

Start: 941690

End: 942010

Strand: Direct

Name: ydeP [H]

Synonym: Amuc_0802

Alternate gene names: 187735304

Gene position: 941690-942010 (Clockwise)

Preceding gene: 187735302

Following gene: 187735307

Centisome position: 35.35

GC content: 54.21

Gene sequence:

>321_bases
ATGACTTACTATAATTCATCATGCCCTGTTGAAACTACTCTCCAACTGATTTCCTCCCGCTGGAAAGTGCTCATCCTCCG
CGATCTGCTCGAAGGCACCCGGCGGTTTGGAGAACTCCGCAAATCCATTGGGCCTGTGACGCAGAAAGTTCTGACCGCGA
ACCTGCGTTCTATGGAAAAGGACGGCCTGCTTACGCGAAAGGTGTATGCGGAAGTACCTCCGCGCGTGGAATATACTCTT
ACGGAACTGGGGCGCAGTCTGCGCCCCGTCCTGGCCTCCATGGCGGAATGGGGATCGAAATACCAAAGAGAAAACCGCTG
A

Upstream 100 bases:

>100_bases
TAACGGCAGGCACTTATTAAAATAGGCGGCAACATTCTTTTTGTAAAGTAGGCAGAAAATAGTACCCTAGATTCCTGAAA
GAAACTATTGCTTAAAATAA

Downstream 100 bases:

>100_bases
TCCTCCCCCCTTTCCGGAGCTTAACCGAACCTCCGGAAAGACATGGAAATACAGCGGTTTCCCTTTTTCCCGCAAGAAAG
GTCAGCGGGAAATTTCCGTC

Product: HxlR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 105

Protein sequence:

>106_residues
MTYYNSSCPVETTLQLISSRWKVLILRDLLEGTRRFGELRKSIGPVTQKVLTANLRSMEKDGLLTRKVYAEVPPRVEYTL
TELGRSLRPVLASMAEWGSKYQRENR

Sequences:

>Translated_106_residues
MTYYNSSCPVETTLQLISSRWKVLILRDLLEGTRRFGELRKSIGPVTQKVLTANLRSMEKDGLLTRKVYAEVPPRVEYTL
TELGRSLRPVLASMAEWGSKYQRENR
>Mature_105_residues
TYYNSSCPVETTLQLISSRWKVLILRDLLEGTRRFGELRKSIGPVTQKVLTANLRSMEKDGLLTRKVYAEVPPRVEYTLT
ELGRSLRPVLASMAEWGSKYQRENR

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=94, Percent_Identity=45.7446808510638, Blast_Score=95, Evalue=8e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 12248; Mature: 12117

Theoretical pI: Translated: 10.38; Mature: 10.38

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYYNSSCPVETTLQLISSRWKVLILRDLLEGTRRFGELRKSIGPVTQKVLTANLRSMEK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLLTRKVYAEVPPRVEYTLTELGRSLRPVLASMAEWGSKYQRENR
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TYYNSSCPVETTLQLISSRWKVLILRDLLEGTRRFGELRKSIGPVTQKVLTANLRSMEK
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DGLLTRKVYAEVPPRVEYTLTELGRSLRPVLASMAEWGSKYQRENR
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]