Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735296
Identifier: 187735296
GI number: 187735296
Start: 931095
End: 931913
Strand: Reverse
Name: 187735296
Synonym: Amuc_0793
Alternate gene names: NA
Gene position: 931913-931095 (Counterclockwise)
Preceding gene: 187735297
Following gene: 187735295
Centisome position: 34.98
GC content: 53.36
Gene sequence:
>819_bases ATGAATAAAATTGTTGCTTCCATCAGCCTGGGCACTGCCGTTTGCATAACAGCCTCCGCATTTGCCCAGGACTCCCATCT TTCCCTGACCAGGCAGAGCGTTGCCAGCATGCATGAAATCGCAGCGGCTCTGGACAAGGTAACGGATGAACCTGGAGCGG CCGCTGCTGTGGAAACGGTTAAAAAAGTTCATAAAAAGCTGCTGGACATTGGGAAAAGACAGCTGGAACTTCCTGGTGCC ACGCTTCAGGAGCAGGCTCAGGTTTCCGCCCAGATGACGGAAGCACAGAAAATTTCAGGTGAATTGATAAAATCTCTGTC CCGTTTGAAGAAGGAAGGTCTGCTTACGCCCGATTTGCAAAAGGCCCTGGCGGATTTACAGTCTGTTCAGAAGGAGCTGG CGCAGGCTTCCCGGGATAAGGCTGAGCAGGCGGAGCCGTTCCAGGAGGATGCGGAGGGCAACACGCATGAAACCCTGCTA ACCAAAACTGTGGAGGAAGTAAAAAAGCTTAACGACTCTCTGGCCAGGGTAAGAGATGAAGAAACCGGCAAGGCTGCTGT GGAACAGATAGGTCGCTACCGGGCGGCTATGCTGGACGTTGCCAGGAAACAGGCTGCCCTGCCGCCTCTCACCCGCAACC AGCAGGCCAAGCTGATGGGAGTGCAGCAGCAGCTTGTGGAAATGATGCAGCCCATTGTCAAGCATGTAACGGCCATCATG CTTTCTCCGGATGCTTCCAGGAACCTGAAGGAAGCTCTGAATTCCCTTTCCGAACTGCCTAAGGAAGTTCAAAAAATCCG TGAAGAGGCGGCTAAGTGA
Upstream 100 bases:
>100_bases TGCGGACAGCCCTTTTTTCATATAGTGGTCTTGACAATAGCCGCCATTGACGGGGAAAGGAGGAAAACGTATTCTTCCAT ACCGGAAAGGCTTCCGTATC
Downstream 100 bases:
>100_bases ACTTTTTAAAGGATGCGTCCTTTTGGGCTGGTCAAAAAATTATAATTGTTCTAAATTGGCTGTCCTGAAAAATGCGCCCG GTTTTTAGTGAAACAGATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 272
Protein sequence:
>272_residues MNKIVASISLGTAVCITASAFAQDSHLSLTRQSVASMHEIAAALDKVTDEPGAAAAVETVKKVHKKLLDIGKRQLELPGA TLQEQAQVSAQMTEAQKISGELIKSLSRLKKEGLLTPDLQKALADLQSVQKELAQASRDKAEQAEPFQEDAEGNTHETLL TKTVEEVKKLNDSLARVRDEETGKAAVEQIGRYRAAMLDVARKQAALPPLTRNQQAKLMGVQQQLVEMMQPIVKHVTAIM LSPDASRNLKEALNSLSELPKEVQKIREEAAK
Sequences:
>Translated_272_residues MNKIVASISLGTAVCITASAFAQDSHLSLTRQSVASMHEIAAALDKVTDEPGAAAAVETVKKVHKKLLDIGKRQLELPGA TLQEQAQVSAQMTEAQKISGELIKSLSRLKKEGLLTPDLQKALADLQSVQKELAQASRDKAEQAEPFQEDAEGNTHETLL TKTVEEVKKLNDSLARVRDEETGKAAVEQIGRYRAAMLDVARKQAALPPLTRNQQAKLMGVQQQLVEMMQPIVKHVTAIM LSPDASRNLKEALNSLSELPKEVQKIREEAAK >Mature_272_residues MNKIVASISLGTAVCITASAFAQDSHLSLTRQSVASMHEIAAALDKVTDEPGAAAAVETVKKVHKKLLDIGKRQLELPGA TLQEQAQVSAQMTEAQKISGELIKSLSRLKKEGLLTPDLQKALADLQSVQKELAQASRDKAEQAEPFQEDAEGNTHETLL TKTVEEVKKLNDSLARVRDEETGKAAVEQIGRYRAAMLDVARKQAALPPLTRNQQAKLMGVQQQLVEMMQPIVKHVTAIM LSPDASRNLKEALNSLSELPKEVQKIREEAAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29612; Mature: 29612
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKIVASISLGTAVCITASAFAQDSHLSLTRQSVASMHEIAAALDKVTDEPGAAAAVETV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KKVHKKLLDIGKRQLELPGATLQEQAQVSAQMTEAQKISGELIKSLSRLKKEGLLTPDLQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KALADLQSVQKELAQASRDKAEQAEPFQEDAEGNTHETLLTKTVEEVKKLNDSLARVRDE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH ETGKAAVEQIGRYRAAMLDVARKQAALPPLTRNQQAKLMGVQQQLVEMMQPIVKHVTAIM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSPDASRNLKEALNSLSELPKEVQKIREEAAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNKIVASISLGTAVCITASAFAQDSHLSLTRQSVASMHEIAAALDKVTDEPGAAAAVETV CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH KKVHKKLLDIGKRQLELPGATLQEQAQVSAQMTEAQKISGELIKSLSRLKKEGLLTPDLQ HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH KALADLQSVQKELAQASRDKAEQAEPFQEDAEGNTHETLLTKTVEEVKKLNDSLARVRDE HHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCH ETGKAAVEQIGRYRAAMLDVARKQAALPPLTRNQQAKLMGVQQQLVEMMQPIVKHVTAIM HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LSPDASRNLKEALNSLSELPKEVQKIREEAAK CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA