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The map label for this gene is pqqE [H]

Identifier: 187735295

GI number: 187735295

Start: 929962

End: 931023

Strand: Reverse

Name: pqqE [H]

Synonym: Amuc_0792

Alternate gene names: 187735295

Gene position: 931023-929962 (Counterclockwise)

Preceding gene: 187735296

Following gene: 187735294

Centisome position: 34.95

GC content: 57.63

Gene sequence:

>1062_bases
ATGCGCCCGGTTTTTAGTGAAACAGATCTCAATGAACGCCCTTTCCTGGTCTTCTGGGAAGTGACGCGCGCTTGCGCGCT
TGCGTGCAGACATTGCCGCGCCGTCGCCCAGCCGCGTCCCCACCCGGATGAATTGACTCATGAGGAGGCATTGCGCCTGA
TTGACCAGTTGGCGGAACTGCGGCCTCCCATGCTGGTGTTGACAGGCGGAGACCCGGTCATGAGGCCGGATATTCTGGAA
TTGGTCCGTGCGGCTTCCGGCAAGGGGCTGCATGTAGCATTGAGCCCTGCTGCTACCGCCCGGCTGTTGCACACGGATTT
CCATGCGTTGAAAGAAGCTGGGGTTCAGAGCATGTCATTGAGCCTGGACGGTGCGCATGAAAGTACCCATGACGCCTTCC
GCGGTGTCCCCCACACATATGAACGGACTCTCCGGGCTGCGGAAATGGCGAAGGAAGCCGGCATGCACTTGCAAATCAAC
ACCACCATTACCAGGAGCACGCTGGGAGAATTTGACGACTTTGTGGAGCTGGTGAAAAAAATGAAACCGGGCATGTGGAG
CGTGTTTCTTCTGGTGCCCACAGGCCGCGCCGCTATGGATGAGATGCCTGCGGCGGAAGACGTGGAAGCCGTCTGGAAAA
AACTGAGCAGGATAAGCCATGAGGTTTCTTTCGGCGTCAAAACGACGGAAGGGCACCATTATCGCCGCGTGGCGCTTCAG
GAAGCCCGTGCTCAGGGAAGCAAGCCTGCTCGCCGCGCCATTCCCACCCGGGACGGCAAGGGCATTATGTTTATTTCTCA
TACCGGGGAAATACAGCCCTCCGGTTTTCTCCCCATAACGGCAGGAAACGTCCGGACGGATGACCCTGGAGAAATCTACC
GCACGCACCCCCTTTTCCTCAAACTCCGGGATGACAATGCGTTGCAGGGCAAATGCGGACGGTGTGAGTACCGTACCATC
TGCGGAGGGTCCCGGTCTCGCGCTTATGCCGTTTACGGAGACATGATGGCGGAAGACAACCTTTGCCCTTATCAGCCCAG
GCTTTCACAACACCATGATTAA

Upstream 100 bases:

>100_bases
AAAAAATCCGTGAAGAGGCGGCTAAGTGAACTTTTTAAAGGATGCGTCCTTTTGGGCTGGTCAAAAAATTATAATTGTTC
TAAATTGGCTGTCCTGAAAA

Downstream 100 bases:

>100_bases
TATTACCAGACTTTGGACAGGGGCGGAACAGCCCGCGGACCATTTGAGATACGGACAGGGCCACGGGCACGGTCGTTTTG
CAGGGGGCGCCGTGGAATCC

Product: Radical SAM domain protein

Products: NA

Alternate protein names: Pyrroloquinoline quinone biosynthesis protein E [H]

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MRPVFSETDLNERPFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAELRPPMLVLTGGDPVMRPDILE
LVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQSMSLSLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQIN
TTITRSTLGEFDDFVELVKKMKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRISHEVSFGVKTTEGHHYRRVALQ
EARAQGSKPARRAIPTRDGKGIMFISHTGEIQPSGFLPITAGNVRTDDPGEIYRTHPLFLKLRDDNALQGKCGRCEYRTI
CGGSRSRAYAVYGDMMAEDNLCPYQPRLSQHHD

Sequences:

>Translated_353_residues
MRPVFSETDLNERPFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAELRPPMLVLTGGDPVMRPDILE
LVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQSMSLSLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQIN
TTITRSTLGEFDDFVELVKKMKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRISHEVSFGVKTTEGHHYRRVALQ
EARAQGSKPARRAIPTRDGKGIMFISHTGEIQPSGFLPITAGNVRTDDPGEIYRTHPLFLKLRDDNALQGKCGRCEYRTI
CGGSRSRAYAVYGDMMAEDNLCPYQPRLSQHHD
>Mature_353_residues
MRPVFSETDLNERPFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAELRPPMLVLTGGDPVMRPDILE
LVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQSMSLSLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQIN
TTITRSTLGEFDDFVELVKKMKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRISHEVSFGVKTTEGHHYRRVALQ
EARAQGSKPARRAIPTRDGKGIMFISHTGEIQPSGFLPITAGNVRTDDPGEIYRTHPLFLKLRDDNALQGKCGRCEYRTI
CGGSRSRAYAVYGDMMAEDNLCPYQPRLSQHHD

Specific function: Unknown

COG id: COG0535

COG function: function code R; Predicted Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. PqqE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR017200
- InterPro:   IPR011843
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 39334; Mature: 39334

Theoretical pI: Translated: 7.46; Mature: 7.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPVFSETDLNERPFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAEL
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHC
RPPMLVLTGGDPVMRPDILELVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQSMSL
CCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
SLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQINTTITRSTLGEFDDFVELVKK
EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECEEHHHHHHHHHHHHHHHHH
MKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRISHEVSFGVKTTEGHHYRRVALQ
HCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
EARAQGSKPARRAIPTRDGKGIMFISHTGEIQPSGFLPITAGNVRTDDPGEIYRTHPLFL
HHHHCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCEEEE
KLRDDNALQGKCGRCEYRTICGGSRSRAYAVYGDMMAEDNLCPYQPRLSQHHD
EECCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRPVFSETDLNERPFLVFWEVTRACALACRHCRAVAQPRPHPDELTHEEALRLIDQLAEL
CCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHC
RPPMLVLTGGDPVMRPDILELVRAASGKGLHVALSPAATARLLHTDFHALKEAGVQSMSL
CCCEEEEECCCCCCCHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEE
SLDGAHESTHDAFRGVPHTYERTLRAAEMAKEAGMHLQINTTITRSTLGEFDDFVELVKK
EECCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEEEECEEHHHHHHHHHHHHHHHHH
MKPGMWSVFLLVPTGRAAMDEMPAAEDVEAVWKKLSRISHEVSFGVKTTEGHHYRRVALQ
HCCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH
EARAQGSKPARRAIPTRDGKGIMFISHTGEIQPSGFLPITAGNVRTDDPGEIYRTHPLFL
HHHHCCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCEEEE
KLRDDNALQGKCGRCEYRTICGGSRSRAYAVYGDMMAEDNLCPYQPRLSQHHD
EECCCCCCCCCCCCCCCCEECCCCCCCEEEEECCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]