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The map label for this gene is yrdA [C]

Identifier: 187735272

GI number: 187735272

Start: 902506

End: 903042

Strand: Reverse

Name: yrdA [C]

Synonym: Amuc_0768

Alternate gene names: 187735272

Gene position: 903042-902506 (Counterclockwise)

Preceding gene: 187735273

Following gene: 187735271

Centisome position: 33.9

GC content: 53.26

Gene sequence:

>537_bases
ATGACTTATATGGCAAGAGAACCTTACGCGAACTTCTGGCCCAAAGTGGCGGATACCGCTTTTGTGGCGGAAAGCGCTGA
TTTGATTGGAGATGTTACCATTGGGGAATATGCCAGCGTCTGGTACCATACCACGCTGCGCGCAGATATCAATAAGATCG
TAATTGGTGATTACTCCAATATCCAGGACAACAGCTGCATCCACCTGGCAGACGATTTCGGCTGCTATGTAGGCAAGTAC
GTAACCGTGGGGCACGGCGTGATTCTGCACGCCTGCACGGTGGAGGATAATTGCCTGATAGGCATGGGGTCCATTATTCT
GGATGGAGCGGTCATCGGCCAGGGGTCTGTGGTGGGAGCGGGCGCGCTCATTACCAAAGGTACCGTCATTCCCCCCAATT
CCCTGGTGCTGGGTTCTCCTGCCAAGGTGGTGAAGGACCTGGGGCCGGAATCCGCGGATAATAACCACAAATGGGCGGAA
AAATACGTCAAGGTGGCTGCCCGCTATACGGAACGGGTTATTAATCCCGGTTTTTAA

Upstream 100 bases:

>100_bases
TTCATTTTCGGGTGGGTTCGGCCGTGTTCGTTTCCGGCTGCGGCATACCCGCGGAATGAACGTTTTTAGACTGGAATGCT
GTCTTATCTTCAATTAATAC

Downstream 100 bases:

>100_bases
CATGTGATTTCCGCCCGCCATGCCGGATGAAAATTTGATTGCTCTGGAACCTTATGCCCTGCTTTACACCCGGGCCGGGG
CGGGTGTGTGTCTGCGTGAT

Product: ferripyochelin binding protein (fbp)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 178; Mature: 177

Protein sequence:

>178_residues
MTYMAREPYANFWPKVADTAFVAESADLIGDVTIGEYASVWYHTTLRADINKIVIGDYSNIQDNSCIHLADDFGCYVGKY
VTVGHGVILHACTVEDNCLIGMGSIILDGAVIGQGSVVGAGALITKGTVIPPNSLVLGSPAKVVKDLGPESADNNHKWAE
KYVKVAARYTERVINPGF

Sequences:

>Translated_178_residues
MTYMAREPYANFWPKVADTAFVAESADLIGDVTIGEYASVWYHTTLRADINKIVIGDYSNIQDNSCIHLADDFGCYVGKY
VTVGHGVILHACTVEDNCLIGMGSIILDGAVIGQGSVVGAGALITKGTVIPPNSLVLGSPAKVVKDLGPESADNNHKWAE
KYVKVAARYTERVINPGF
>Mature_177_residues
TYMAREPYANFWPKVADTAFVAESADLIGDVTIGEYASVWYHTTLRADINKIVIGDYSNIQDNSCIHLADDFGCYVGKYV
TVGHGVILHACTVEDNCLIGMGSIILDGAVIGQGSVVGAGALITKGTVIPPNSLVLGSPAKVVKDLGPESADNNHKWAEK
YVKVAARYTERVINPGF

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=171, Percent_Identity=34.5029239766082, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI1787667, Length=174, Percent_Identity=35.632183908046, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI87081681, Length=164, Percent_Identity=35.3658536585366, Blast_Score=99, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001451
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00132 Hexapep [H]

EC number: NA

Molecular weight: Translated: 19065; Mature: 18934

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTYMAREPYANFWPKVADTAFVAESADLIGDVTIGEYASVWYHTTLRADINKIVIGDYSN
CCCCCCCCCHHHCCHHHHHHHHHCCCHHHCCCCCCHHHHHHEEEEEECCCCEEEECCCCC
IQDNSCIHLADDFGCYVGKYVTVGHGVILHACTVEDNCLIGMGSIILDGAVIGQGSVVGA
CCCCCEEEEECCCCHHHCCEEEECCCEEEEEEECCCCEEEEECHHHCCCEEECCCCEEEC
GALITKGTVIPPNSLVLGSPAKVVKDLGPESADNNHKWAEKYVKVAARYTERVINPGF
CEEEECCEECCCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TYMAREPYANFWPKVADTAFVAESADLIGDVTIGEYASVWYHTTLRADINKIVIGDYSN
CCCCCCCCHHHCCHHHHHHHHHCCCHHHCCCCCCHHHHHHEEEEEECCCCEEEECCCCC
IQDNSCIHLADDFGCYVGKYVTVGHGVILHACTVEDNCLIGMGSIILDGAVIGQGSVVGA
CCCCCEEEEECCCCHHHCCEEEECCCEEEEEEECCCCEEEEECHHHCCCEEECCCCEEEC
GALITKGTVIPPNSLVLGSPAKVVKDLGPESADNNHKWAEKYVKVAARYTERVINPGF
CEEEECCEECCCCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]