Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735267
Identifier: 187735267
GI number: 187735267
Start: 897888
End: 898919
Strand: Direct
Name: 187735267
Synonym: Amuc_0762
Alternate gene names: NA
Gene position: 897888-898919 (Clockwise)
Preceding gene: 187735266
Following gene: 187735274
Centisome position: 33.7
GC content: 55.23
Gene sequence:
>1032_bases ATGACGGATTCCTCCCGCCCCACACGCATCAAGGTCATCAGAAAATCCATGAAGGCCTCTCCGGATCAAACGGAATCCCT GTTGTGGGGCGACTGCCTGTTCTGCACGGACGCCGCCATGACGGATTACGACTGGGTTCTGGTATACGACGAATTTCCCA GAACTCCCGTGGGCACCATCAGGAATGAAACGGAACCCCTTCTCTGTCCTCCGGACCAGACTATCCTGATTACGGTGGAG CCCCCCTCCATCAAAATCTACAGCAGGGCATACACCAGCCAATTCGGCACCGTTCTCACCACCCACTCCATCCGGGACCT TCCGCACCCCGGGCACACCTTGGGCCGCGGATGTCTTGAATGGCTGTACATCAAGCCCATGCAGGAAATTCTGGACCAGA AGGAATTCCCGAAGACAAAAATGCTCTCCACCATCTGCTCCGCCAAGCAGCATACGCATACCATGCATAAAAAGCGCTAT GATCTTACGCGTTACCTGGCGGACCGTCTGCCGGAACTGGACTGGTTCGGACACGGCATCCGGGAAATAGAAAATAAAAC CGTCGCCATGGATGACTACAAATATCATCTATGCGTGGAAAACCATCTGGAACCCCACCATTGGACGGAAAAACTGTCTG ATGCCTTTGTTGCCATGACCCTTCCCTTTTACGCCGGGGATCCGTTGGCAACGGAATGCTTCCCGCAGGAAAGCTTCATC CCCATCCCGCTGGACAACCCGCAAAAAGCCCTTGAAATCATCCGCAAGGCCATGGAGGACGGAGAATATGAAAAACGGCT CCCCGCCATCCGTGAGGCAAGGCGCCTGGTGCTGGAAAAATACAACATGTTCGCTCAAACAGCGGCAGTCATTCACAACC ACAGGGAAACGGGAACCATACGCCCCGGAGCCATGCTGAAAGGACGCCACGTTCTGCGGAAAAATCCGCTCCATGCCCTT CGGGAATTGACGGACACGCTGGCCTATAAAATCAGGTCGCGCGGCAGGCGCGGAACCGGAACCGGAGCATAA
Upstream 100 bases:
>100_bases CTACACTGGCGCCAGGCAGTAAAGCCTTCGCGATGGTCCCGGATAAAAGCCCGGAATATGAAGGCCATACCGCGTCCCCC TATTCAACGCCTGTACTCCC
Downstream 100 bases:
>100_bases CCTGAATTCCGGGCGCGCGGCAGCGGGGGGGGGGGGCAGGCCTTCCCTGCCAGTAAAGAAAATGGGCGTCCGATCTTCTG CCGATGGCCGCGCGGCTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Protein; Methyltransferase FkbM Family; Glycosyl Transferase Family Protein; Glycosyl Transferase
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MTDSSRPTRIKVIRKSMKASPDQTESLLWGDCLFCTDAAMTDYDWVLVYDEFPRTPVGTIRNETEPLLCPPDQTILITVE PPSIKIYSRAYTSQFGTVLTTHSIRDLPHPGHTLGRGCLEWLYIKPMQEILDQKEFPKTKMLSTICSAKQHTHTMHKKRY DLTRYLADRLPELDWFGHGIREIENKTVAMDDYKYHLCVENHLEPHHWTEKLSDAFVAMTLPFYAGDPLATECFPQESFI PIPLDNPQKALEIIRKAMEDGEYEKRLPAIREARRLVLEKYNMFAQTAAVIHNHRETGTIRPGAMLKGRHVLRKNPLHAL RELTDTLAYKIRSRGRRGTGTGA
Sequences:
>Translated_343_residues MTDSSRPTRIKVIRKSMKASPDQTESLLWGDCLFCTDAAMTDYDWVLVYDEFPRTPVGTIRNETEPLLCPPDQTILITVE PPSIKIYSRAYTSQFGTVLTTHSIRDLPHPGHTLGRGCLEWLYIKPMQEILDQKEFPKTKMLSTICSAKQHTHTMHKKRY DLTRYLADRLPELDWFGHGIREIENKTVAMDDYKYHLCVENHLEPHHWTEKLSDAFVAMTLPFYAGDPLATECFPQESFI PIPLDNPQKALEIIRKAMEDGEYEKRLPAIREARRLVLEKYNMFAQTAAVIHNHRETGTIRPGAMLKGRHVLRKNPLHAL RELTDTLAYKIRSRGRRGTGTGA >Mature_342_residues TDSSRPTRIKVIRKSMKASPDQTESLLWGDCLFCTDAAMTDYDWVLVYDEFPRTPVGTIRNETEPLLCPPDQTILITVEP PSIKIYSRAYTSQFGTVLTTHSIRDLPHPGHTLGRGCLEWLYIKPMQEILDQKEFPKTKMLSTICSAKQHTHTMHKKRYD LTRYLADRLPELDWFGHGIREIENKTVAMDDYKYHLCVENHLEPHHWTEKLSDAFVAMTLPFYAGDPLATECFPQESFIP IPLDNPQKALEIIRKAMEDGEYEKRLPAIREARRLVLEKYNMFAQTAAVIHNHRETGTIRPGAMLKGRHVLRKNPLHALR ELTDTLAYKIRSRGRRGTGTGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39501; Mature: 39370
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSSRPTRIKVIRKSMKASPDQTESLLWGDCLFCTDAAMTDYDWVLVYDEFPRTPVGTI CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC RNETEPLLCPPDQTILITVEPPSIKIYSRAYTSQFGTVLTTHSIRDLPHPGHTLGRGCLE CCCCCCEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH WLYIKPMQEILDQKEFPKTKMLSTICSAKQHTHTMHKKRYDLTRYLADRLPELDWFGHGI HHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH REIENKTVAMDDYKYHLCVENHLEPHHWTEKLSDAFVAMTLPFYAGDPLATECFPQESFI HHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEEEECHHCCCCCCHHCCCCCCEE PIPLDNPQKALEIIRKAMEDGEYEKRLPAIREARRLVLEKYNMFAQTAAVIHNHRETGTI ECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPGAMLKGRHVLRKNPLHALRELTDTLAYKIRSRGRRGTGTGA CCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TDSSRPTRIKVIRKSMKASPDQTESLLWGDCLFCTDAAMTDYDWVLVYDEFPRTPVGTI CCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCC RNETEPLLCPPDQTILITVEPPSIKIYSRAYTSQFGTVLTTHSIRDLPHPGHTLGRGCLE CCCCCCEECCCCCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH WLYIKPMQEILDQKEFPKTKMLSTICSAKQHTHTMHKKRYDLTRYLADRLPELDWFGHGI HHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH REIENKTVAMDDYKYHLCVENHLEPHHWTEKLSDAFVAMTLPFYAGDPLATECFPQESFI HHHCCCEEEECCCEEEEEECCCCCHHHHHHHHHHHHEEEEECHHCCCCCCHHCCCCCCEE PIPLDNPQKALEIIRKAMEDGEYEKRLPAIREARRLVLEKYNMFAQTAAVIHNHRETGTI ECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC RPGAMLKGRHVLRKNPLHALRELTDTLAYKIRSRGRRGTGTGA CCCCHHCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA