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The map label for this gene is panD [H]

Identifier: 187735252

GI number: 187735252

Start: 881929

End: 882267

Strand: Reverse

Name: panD [H]

Synonym: Amuc_0747

Alternate gene names: 187735252

Gene position: 882267-881929 (Counterclockwise)

Preceding gene: 187735253

Following gene: 187735251

Centisome position: 33.12

GC content: 51.33

Gene sequence:

>339_bases
ATGTTGGTTGAGCAGTTAAAATCAAAAATTCATCGCGCCATGATTACCCGTGGCGATGTTCAATATGAAGGCAGTATTGA
AATTCCTGCCGATTTGATGGCCGCCGTGGATTTGTGGCCCGGGGAAAAAGTTCTCGTGGCGTCCGTCACGTCCGGGAACC
GTCTGGAAACATATGCTCTCCAGGGGCCTGCCGGCACGGGGAACATCATCATGAACGGCGGTGCGGCCCATTTAATCAAG
ACGGGCGAACGGGTGGTCATTATGAGTTTTGCCTTGTCGGACAAGCCCATCATCCCCAAGAAAATCGTCTGCAACGAGCA
TAACGAAATCATTTCCTAG

Upstream 100 bases:

>100_bases
GCGGAAGCGCTGGAGGAGGGGGAGTAAGACACAGAAAACCGTAAAATGGAGGATGACGGCTTGACCGGAGGGGCGATCGG
GGGTTTGTTGTTCGAACGTC

Downstream 100 bases:

>100_bases
ACTTTACAAACCGTTCGAATTCACACATACTCCCCGCGCTCATGAACCTTTTTTTAGCAGATTCACTCAATATCAGCATT
CAGTTACTTTTTGCCGTTTT

Product: aspartate decarboxylase

Products: NA

Alternate protein names: Aspartate alpha-decarboxylase [H]

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MLVEQLKSKIHRAMITRGDVQYEGSIEIPADLMAAVDLWPGEKVLVASVTSGNRLETYALQGPAGTGNIIMNGGAAHLIK
TGERVVIMSFALSDKPIIPKKIVCNEHNEIIS

Sequences:

>Translated_112_residues
MLVEQLKSKIHRAMITRGDVQYEGSIEIPADLMAAVDLWPGEKVLVASVTSGNRLETYALQGPAGTGNIIMNGGAAHLIK
TGERVVIMSFALSDKPIIPKKIVCNEHNEIIS
>Mature_112_residues
MLVEQLKSKIHRAMITRGDVQYEGSIEIPADLMAAVDLWPGEKVLVASVTSGNRLETYALQGPAGTGNIIMNGGAAHLIK
TGERVVIMSFALSDKPIIPKKIVCNEHNEIIS

Specific function: Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine [H]

COG id: COG0853

COG function: function code H; Aspartate 1-decarboxylase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the panD family [H]

Homologues:

Organism=Escherichia coli, GI1786323, Length=90, Percent_Identity=37.7777777777778, Blast_Score=70, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR003190
- ProDom:   PD009294 [H]

Pfam domain/function: PF02261 Asp_decarbox [H]

EC number: =4.1.1.11 [H]

Molecular weight: Translated: 12082; Mature: 12082

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVEQLKSKIHRAMITRGDVQYEGSIEIPADLMAAVDLWPGEKVLVASVTSGNRLETYAL
CCHHHHHHHHHHHHHCCCCEEECCCEECCHHHHEEEECCCCCEEEEEEECCCCEEEEEEE
QGPAGTGNIIMNGGAAHLIKTGERVVIMSFALSDKPIIPKKIVCNEHNEIIS
ECCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCEEEECCCCCCCC
>Mature Secondary Structure
MLVEQLKSKIHRAMITRGDVQYEGSIEIPADLMAAVDLWPGEKVLVASVTSGNRLETYAL
CCHHHHHHHHHHHHHCCCCEEECCCEECCHHHHEEEECCCCCEEEEEEECCCCEEEEEEE
QGPAGTGNIIMNGGAAHLIKTGERVVIMSFALSDKPIIPKKIVCNEHNEIIS
ECCCCCCCEEEECCCEEEEECCCEEEEEEEECCCCCCCCCEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA