| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is aroG [H]
Identifier: 187735249
GI number: 187735249
Start: 879379
End: 880446
Strand: Reverse
Name: aroG [H]
Synonym: Amuc_0744
Alternate gene names: 187735249
Gene position: 880446-879379 (Counterclockwise)
Preceding gene: 187735250
Following gene: 187735241
Centisome position: 33.05
GC content: 56.84
Gene sequence:
>1068_bases ATGAACTGGTTCAAAACAGACGACATACGCATTCAAGACATTGAGCCCCTGATTTCCCCCGCCATTTTAATCAAGGATTA TCCGGCAACCACCGAAATCGCCAAAATGGTGGCTACGACCCGCAAGAATGCGGAGAACATCATTTCCGGCCACGACGACC GCCTGCTGGTGGTGGTGGGGCCATGCTCCATCCATGATCCCCAGGCTGCCGTGGACTATGCCTCCCGCCTGAAGGAACAA ATGGCGCGCTTTGAAAAGGATCTGGTGATCATCATGCGCGTGTATTTTGAAAAGCCCCGCACCACCGTTGGCTGGAAGGG CCTCATCAACGACCCGTTCATGAACCATACCTTTGACATCAACCGCGGCCTCCATATGGCCCGCGGGCTGCTGCTGCGCC TGGGGGATATGGGAGTGCCCGCAGCTACCGAGTTCCTGGACACCATCACGCCGCAGTACATTGCGGACCTGATCACGTGG GGCGCCATCGGCGCGCGCACCACGGAAAGCCAGGTACACCGTGAACTGGCTTCCGGGCTTTCCATGCCTGTGGGATTCAA GAATGGCACCAGCGGCAGCCTGCAAATCGCTGTAGACGCCATTGTTTCCTCCTCCTGTCCGCACTGCTTCCTTTCCGTGA CCAAGCAGGGAGTTTCCGCCATTGTTTCCACTACGGGCAATAAATCCTGCCACCTGATCCTGCGCGGTTCCTCCCTGGGG CCGAACTTTGATGAAGATCATGTAAAAGAAGCGGAAGAAGCCTTGCAGAAGGCCGGCATCAACAACCGCATCATGATAGA CTGTTCCCACGGAAACAGTTGCAAGGATTATCGCAAACAGCCGGCTGTGGCCGCCAATATCGCGGAACAGATATCCAGCG GGTCCGAACAGGTTGTTGCCGTGATGATTGAAAGCAACATTGTGGAAGGGGCCCAGCCGTTGAGTTCCGACCTGGTGTAC GGCAAGAGCATCACGGACCAGTGCATTGGGTGGGAGACGACAGTGGAAGTGCTGGAAACCCTTGCCGCCGCTGTCCGCAA ACGCCGTGCCAAACGGCAGGAAGCGTAA
Upstream 100 bases:
>100_bases TTATGGCCGTGAGGCCCCGCGGTATATTCAGGCATAAAGCCCGCAAACCGTATTTTTTTCTTTTCAACTTCTCTCAAAAA CCTCTCAATAAGCCCCAGAC
Downstream 100 bases:
>100_bases GCGTGCCCATATTCCGGAGGATTATTAACAGAGTTGAAAGCTGGCGCGGCCATGTCTTGGCCGGCGAGACTGCCGGATAT GCAGGTTTCATCCTGCATAT
Product: phospho-2-dehydro-3-deoxyheptonate aldolase
Products: NA
Alternate protein names: 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase; DAHP synthase; Phospho-2-keto-3-deoxyheptonate aldolase [H]
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MNWFKTDDIRIQDIEPLISPAILIKDYPATTEIAKMVATTRKNAENIISGHDDRLLVVVGPCSIHDPQAAVDYASRLKEQ MARFEKDLVIIMRVYFEKPRTTVGWKGLINDPFMNHTFDINRGLHMARGLLLRLGDMGVPAATEFLDTITPQYIADLITW GAIGARTTESQVHRELASGLSMPVGFKNGTSGSLQIAVDAIVSSSCPHCFLSVTKQGVSAIVSTTGNKSCHLILRGSSLG PNFDEDHVKEAEEALQKAGINNRIMIDCSHGNSCKDYRKQPAVAANIAEQISSGSEQVVAVMIESNIVEGAQPLSSDLVY GKSITDQCIGWETTVEVLETLAAAVRKRRAKRQEA
Sequences:
>Translated_355_residues MNWFKTDDIRIQDIEPLISPAILIKDYPATTEIAKMVATTRKNAENIISGHDDRLLVVVGPCSIHDPQAAVDYASRLKEQ MARFEKDLVIIMRVYFEKPRTTVGWKGLINDPFMNHTFDINRGLHMARGLLLRLGDMGVPAATEFLDTITPQYIADLITW GAIGARTTESQVHRELASGLSMPVGFKNGTSGSLQIAVDAIVSSSCPHCFLSVTKQGVSAIVSTTGNKSCHLILRGSSLG PNFDEDHVKEAEEALQKAGINNRIMIDCSHGNSCKDYRKQPAVAANIAEQISSGSEQVVAVMIESNIVEGAQPLSSDLVY GKSITDQCIGWETTVEVLETLAAAVRKRRAKRQEA >Mature_355_residues MNWFKTDDIRIQDIEPLISPAILIKDYPATTEIAKMVATTRKNAENIISGHDDRLLVVVGPCSIHDPQAAVDYASRLKEQ MARFEKDLVIIMRVYFEKPRTTVGWKGLINDPFMNHTFDINRGLHMARGLLLRLGDMGVPAATEFLDTITPQYIADLITW GAIGARTTESQVHRELASGLSMPVGFKNGTSGSLQIAVDAIVSSSCPHCFLSVTKQGVSAIVSTTGNKSCHLILRGSSLG PNFDEDHVKEAEEALQKAGINNRIMIDCSHGNSCKDYRKQPAVAANIAEQISSGSEQVVAVMIESNIVEGAQPLSSDLVY GKSITDQCIGWETTVEVLETLAAAVRKRRAKRQEA
Specific function: Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP) [H]
COG id: COG0722
COG function: function code E; 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I DAHP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786969, Length=349, Percent_Identity=58.4527220630373, Blast_Score=426, Evalue=1e-120, Organism=Escherichia coli, GI1788953, Length=338, Percent_Identity=50.5917159763314, Blast_Score=360, Evalue=1e-101, Organism=Escherichia coli, GI1787996, Length=346, Percent_Identity=50, Blast_Score=354, Evalue=5e-99, Organism=Saccharomyces cerevisiae, GI6319726, Length=353, Percent_Identity=55.5240793201133, Blast_Score=390, Evalue=1e-109, Organism=Saccharomyces cerevisiae, GI6320240, Length=354, Percent_Identity=52.8248587570621, Blast_Score=386, Evalue=1e-108,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006218 - InterPro: IPR006219 [H]
Pfam domain/function: PF00793 DAHP_synth_1 [H]
EC number: =2.5.1.54 [H]
Molecular weight: Translated: 38807; Mature: 38807
Theoretical pI: Translated: 6.42; Mature: 6.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWFKTDDIRIQDIEPLISPAILIKDYPATTEIAKMVATTRKNAENIISGHDDRLLVVVG CCCCCCCCEEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEC PCSIHDPQAAVDYASRLKEQMARFEKDLVIIMRVYFEKPRTTVGWKGLINDPFMNHTFDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC NRGLHMARGLLLRLGDMGVPAATEFLDTITPQYIADLITWGAIGARTTESQVHRELASGL CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC SMPVGFKNGTSGSLQIAVDAIVSSSCPHCFLSVTKQGVSAIVSTTGNKSCHLILRGSSLG CCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC PNFDEDHVKEAEEALQKAGINNRIMIDCSHGNSCKDYRKQPAVAANIAEQISSGSEQVVA CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEE VMIESNIVEGAQPLSSDLVYGKSITDQCIGWETTVEVLETLAAAVRKRRAKRQEA EEEHHHHHCCCCCHHHHCEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNWFKTDDIRIQDIEPLISPAILIKDYPATTEIAKMVATTRKNAENIISGHDDRLLVVVG CCCCCCCCEEEECCHHHHCCEEEEECCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEEEEC PCSIHDPQAAVDYASRLKEQMARFEKDLVIIMRVYFEKPRTTVGWKGLINDPFMNHTFDI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEC NRGLHMARGLLLRLGDMGVPAATEFLDTITPQYIADLITWGAIGARTTESQVHRELASGL CCCHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC SMPVGFKNGTSGSLQIAVDAIVSSSCPHCFLSVTKQGVSAIVSTTGNKSCHLILRGSSLG CCCCCCCCCCCCEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCC PNFDEDHVKEAEEALQKAGINNRIMIDCSHGNSCKDYRKQPAVAANIAEQISSGSEQVVA CCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHCCCCCCEEE VMIESNIVEGAQPLSSDLVYGKSITDQCIGWETTVEVLETLAAAVRKRRAKRQEA EEEHHHHHCCCCCHHHHCEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]