Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is fba [H]
Identifier: 187735227
GI number: 187735227
Start: 850692
End: 851723
Strand: Direct
Name: fba [H]
Synonym: Amuc_0721
Alternate gene names: 187735227
Gene position: 850692-851723 (Clockwise)
Preceding gene: 187735226
Following gene: 187735229
Centisome position: 31.93
GC content: 57.36
Gene sequence:
>1032_bases ATGCCAATAGCCACACCAGAACAATACATTACCATGCTTGAAACGGCCAAAAAGGAAGGCTACGCCTATCCGGCCGTTAA CGTGACCACGATCGAAGTCATCAACGGCGCTCTCCGCGCTTTTTCCGAAGCCAAAAGCGACGGTATCATTCAGGTTTCCA TCGGTGGCGGCAAATTCGCCTCCGGCAGCTCCGTAGGCAATTCCGCCCTTGGCGCCATTGTTCTGGCGGAAGCAACGCGT CGTCTGGCTGAAAAGCACAACGTTCTCGTAGCCCTTCACACGGACCACTGCCAGCCCGAACACGTGGATACTTTCCTGCG TCCTCTGATTGCCGAATCCCGCCGCCGCGTGGAACGCGGTGAAGCCCCCCTCTTCAATTCCCACATGCTGGATGCCTCCA CGCTTCCCATGGCGGAAAACCTCAAGCTTTCCCGGGAACTGCTGAAGGAATGCGCCGAACTGGGCATCGTTCTTGAAATC GAAATCGGCGTTGTGGGCGGAGAAGAAGACGGAGTGGACAACTCCGGCCATCCCGCCGACAAGCTTTACACTTCTCCGGA AGATATGCTGATGACGTATGAAGCCCTCGCGCCCCTCGGCAAATTCATGCTGGCCGCCACTTTCGGCAACGTGCACGGCG TGTACAAGCCCGGCCACGTCAAACTGAAACCCAGCATCCTGCGGGACGGTCAGGAAGCCGTGGTAGCCAAACACGGAGAA GCGGCTCGCATGCCCCTCGTCTTCCATGGCGGTTCCGGTTCCGAACTTTCCGATATCCGCGAAGCCGTTTCCTACGGCGT CGTCAAGATGAACATCGACACCGACACGCAATACGCCTTCACCCGCCCGATCGTCTCCCACATGTGCGAACACATCAACG GAGTGCTCAAGATTGATGGCGAAGTGGGCAACAAGAAGGATTACGATCCCCGTTCCTATCTTGCCAAGGGTGAAAAGGGA GTCGCCGCCCGCCTTCAGGAAGCCGCCGACAACCTTATGTCCGCCGGCAAGACCCTCTTTGGCAAAATCTAA
Upstream 100 bases:
>100_bases GATTCGAACATGAACATGTCCCGCAAGAGCGCTGCAACCCCGGCGTGCGCCTGAGTTCAGCCTTGCCCTCCTGAAAAAAA ACACCTATCATATCCCCGTT
Downstream 100 bases:
>100_bases AAAGAGTTCCCTCAACGAGTTTAATGCCATGCCCGGTTTCTTAAAAGAAACCGGGCATTTTTTCTGGAAAAACCCGCCAA CAGGGTAAGGCGGGAAACGC
Product: fructose-bisphosphate aldolase
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 343; Mature: 342
Protein sequence:
>343_residues MPIATPEQYITMLETAKKEGYAYPAVNVTTIEVINGALRAFSEAKSDGIIQVSIGGGKFASGSSVGNSALGAIVLAEATR RLAEKHNVLVALHTDHCQPEHVDTFLRPLIAESRRRVERGEAPLFNSHMLDASTLPMAENLKLSRELLKECAELGIVLEI EIGVVGGEEDGVDNSGHPADKLYTSPEDMLMTYEALAPLGKFMLAATFGNVHGVYKPGHVKLKPSILRDGQEAVVAKHGE AARMPLVFHGGSGSELSDIREAVSYGVVKMNIDTDTQYAFTRPIVSHMCEHINGVLKIDGEVGNKKDYDPRSYLAKGEKG VAARLQEAADNLMSAGKTLFGKI
Sequences:
>Translated_343_residues MPIATPEQYITMLETAKKEGYAYPAVNVTTIEVINGALRAFSEAKSDGIIQVSIGGGKFASGSSVGNSALGAIVLAEATR RLAEKHNVLVALHTDHCQPEHVDTFLRPLIAESRRRVERGEAPLFNSHMLDASTLPMAENLKLSRELLKECAELGIVLEI EIGVVGGEEDGVDNSGHPADKLYTSPEDMLMTYEALAPLGKFMLAATFGNVHGVYKPGHVKLKPSILRDGQEAVVAKHGE AARMPLVFHGGSGSELSDIREAVSYGVVKMNIDTDTQYAFTRPIVSHMCEHINGVLKIDGEVGNKKDYDPRSYLAKGEKG VAARLQEAADNLMSAGKTLFGKI >Mature_342_residues PIATPEQYITMLETAKKEGYAYPAVNVTTIEVINGALRAFSEAKSDGIIQVSIGGGKFASGSSVGNSALGAIVLAEATRR LAEKHNVLVALHTDHCQPEHVDTFLRPLIAESRRRVERGEAPLFNSHMLDASTLPMAENLKLSRELLKECAELGIVLEIE IGVVGGEEDGVDNSGHPADKLYTSPEDMLMTYEALAPLGKFMLAATFGNVHGVYKPGHVKLKPSILRDGQEAVVAKHGEA ARMPLVFHGGSGSELSDIREAVSYGVVKMNIDTDTQYAFTRPIVSHMCEHINGVLKIDGEVGNKKDYDPRSYLAKGEKGV AARLQEAADNLMSAGKTLFGKI
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI1789293, Length=337, Percent_Identity=41.2462908011869, Blast_Score=244, Evalue=7e-66, Organism=Escherichia coli, GI87082041, Length=310, Percent_Identity=27.4193548387097, Blast_Score=102, Evalue=4e-23, Organism=Escherichia coli, GI1789526, Length=306, Percent_Identity=29.0849673202614, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1788072, Length=263, Percent_Identity=31.1787072243346, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6322790, Length=337, Percent_Identity=36.7952522255193, Blast_Score=201, Evalue=1e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006411 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 36924; Mature: 36792
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: PS00806 ALDOLASE_CLASS_II_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIATPEQYITMLETAKKEGYAYPAVNVTTIEVINGALRAFSEAKSDGIIQVSIGGGKFA CCCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SGSSVGNSALGAIVLAEATRRLAEKHNVLVALHTDHCQPEHVDTFLRPLIAESRRRVERG CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC EAPLFNSHMLDASTLPMAENLKLSRELLKECAELGIVLEIEIGVVGGEEDGVDNSGHPAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCHH KLYTSPEDMLMTYEALAPLGKFMLAATFGNVHGVYKPGHVKLKPSILRDGQEAVVAKHGE HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHCCCCHHHHCCCCC AARMPLVFHGGSGSELSDIREAVSYGVVKMNIDTDTQYAFTRPIVSHMCEHINGVLKIDG CCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECC EVGNKKDYDPRSYLAKGEKGVAARLQEAADNLMSAGKTLFGKI CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCC >Mature Secondary Structure PIATPEQYITMLETAKKEGYAYPAVNVTTIEVINGALRAFSEAKSDGIIQVSIGGGKFA CCCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCC SGSSVGNSALGAIVLAEATRRLAEKHNVLVALHTDHCQPEHVDTFLRPLIAESRRRVERG CCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHC EAPLFNSHMLDASTLPMAENLKLSRELLKECAELGIVLEIEIGVVGGEEDGVDNSGHPAD CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCCCCCCCCHH KLYTSPEDMLMTYEALAPLGKFMLAATFGNVHGVYKPGHVKLKPSILRDGQEAVVAKHGE HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECHHHHCCCCHHHHCCCCC AARMPLVFHGGSGSELSDIREAVSYGVVKMNIDTDTQYAFTRPIVSHMCEHINGVLKIDG CCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEECC EVGNKKDYDPRSYLAKGEKGVAARLQEAADNLMSAGKTLFGKI CCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2615658; 12948626 [H]