Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735186
Identifier: 187735186
GI number: 187735186
Start: 798804
End: 799688
Strand: Direct
Name: 187735186
Synonym: Amuc_0680
Alternate gene names: NA
Gene position: 798804-799688 (Clockwise)
Preceding gene: 187735185
Following gene: 187735187
Centisome position: 29.98
GC content: 55.93
Gene sequence:
>885_bases ATGTCCTCCCCGCAGAATACGATCGCCCTGGTTTTCGACTACGACCAGACCCTGAGTCCCTTCTACATGCAGGATCAGGC CATCTTCCCGGAATTCGGCATTTCTCCGCAGGAATTCTGGACCAGGTGCAACGCCACCGGAGAAAGAGAAGGCTGGGACG GAGAACTGATTTACATGAAAAGCCTGCTGGACGCCCTTTCCCTGGACCGCGTCAGCAACGCCCGGCTTACCCAGCTTGGA GAGCGCCTCACCTTTTACCCCGGTTTGCCGGACTTTTTTAACGCGTTCCCGTCCATGACCCTCTCCTCCCTTCATACGGA TCTGGGCATCAGCATTGAATACTATATCATCTCCTCCGGTTTGAAAGCCCTGATTGACGGTTCCGCCCTGCGCCCTTATT TCAAGGCCGTATTCGGATGCGAATTCAGCGAGGAGAACGGCTACATCAATTTTCCCAAGAGAGTCATTTCCCACACCACG AAAACCCAGTACCTTTTCCGCATCAACAAGGGAATGCTGGATTACGACCAGGACGTAAACGACCACATGCCGGAAGACAT GCGCCCCATTCCTTTCGCCAACATGATTTACATCGGCGACGGCCCTACGGACGTTCCCTGCTTCACCGTCATGCGCCGGA ACGGAGGCCACGCCGTAGCCGTATATAATCCGGAAGATGAAACCGGCCGCAGTTTCCGCAAATGCTATAATCTGGCCTCC AATTCCGACCGCGTGAATTTCATCGCCCCGGCGGATTACACGCCCGGCAGCCATCTCACCCGCCTGCTGTCCGGCATGGT CACGGATATCGCCAACGGCATTGTGCGCCGCCGGGACCGGGCTCTGGCGGATTCCTGTATTGCGGCTCCTTCCTTTTCCA AATAA
Upstream 100 bases:
>100_bases TCAAGCACGGTACTTCCGAGGAAATCGCCAACGACCCCATCGCCCGCAAGCAGTATCTGGGCGACCAGTTCCGCATGTAA TTTTATTTTCCGTCTTTCCC
Downstream 100 bases:
>100_bases AACCCGCTCCATTCCTCTCCCCGTCATGAACAGCCATTTCCACTTTCTCGGCATCTGCGGCACCGCCATGGGCGCAGTAG CCGCCGCCATGGCCCGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSSPQNTIALVFDYDQTLSPFYMQDQAIFPEFGISPQEFWTRCNATGEREGWDGELIYMKSLLDALSLDRVSNARLTQLG ERLTFYPGLPDFFNAFPSMTLSSLHTDLGISIEYYIISSGLKALIDGSALRPYFKAVFGCEFSEENGYINFPKRVISHTT KTQYLFRINKGMLDYDQDVNDHMPEDMRPIPFANMIYIGDGPTDVPCFTVMRRNGGHAVAVYNPEDETGRSFRKCYNLAS NSDRVNFIAPADYTPGSHLTRLLSGMVTDIANGIVRRRDRALADSCIAAPSFSK
Sequences:
>Translated_294_residues MSSPQNTIALVFDYDQTLSPFYMQDQAIFPEFGISPQEFWTRCNATGEREGWDGELIYMKSLLDALSLDRVSNARLTQLG ERLTFYPGLPDFFNAFPSMTLSSLHTDLGISIEYYIISSGLKALIDGSALRPYFKAVFGCEFSEENGYINFPKRVISHTT KTQYLFRINKGMLDYDQDVNDHMPEDMRPIPFANMIYIGDGPTDVPCFTVMRRNGGHAVAVYNPEDETGRSFRKCYNLAS NSDRVNFIAPADYTPGSHLTRLLSGMVTDIANGIVRRRDRALADSCIAAPSFSK >Mature_293_residues SSPQNTIALVFDYDQTLSPFYMQDQAIFPEFGISPQEFWTRCNATGEREGWDGELIYMKSLLDALSLDRVSNARLTQLGE RLTFYPGLPDFFNAFPSMTLSSLHTDLGISIEYYIISSGLKALIDGSALRPYFKAVFGCEFSEENGYINFPKRVISHTTK TQYLFRINKGMLDYDQDVNDHMPEDMRPIPFANMIYIGDGPTDVPCFTVMRRNGGHAVAVYNPEDETGRSFRKCYNLASN SDRVNFIAPADYTPGSHLTRLLSGMVTDIANGIVRRRDRALADSCIAAPSFSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33100; Mature: 32969
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPQNTIALVFDYDQTLSPFYMQDQAIFPEFGISPQEFWTRCNATGEREGWDGELIYMK CCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH SLLDALSLDRVSNARLTQLGERLTFYPGLPDFFNAFPSMTLSSLHTDLGISIEYYIISSG HHHHHHHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC LKALIDGSALRPYFKAVFGCEFSEENGYINFPKRVISHTTKTQYLFRINKGMLDYDQDVN HHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCHHHHEEEEECCCCCCCCCCCH DHMPEDMRPIPFANMIYIGDGPTDVPCFTVMRRNGGHAVAVYNPEDETGRSFRKCYNLAS HCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCC NSDRVNFIAPADYTPGSHLTRLLSGMVTDIANGIVRRRDRALADSCIAAPSFSK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSPQNTIALVFDYDQTLSPFYMQDQAIFPEFGISPQEFWTRCNATGEREGWDGELIYMK CCCCCEEEEEEECCCCCCCCEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHH SLLDALSLDRVSNARLTQLGERLTFYPGLPDFFNAFPSMTLSSLHTDLGISIEYYIISSG HHHHHHHHHHCCCHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC LKALIDGSALRPYFKAVFGCEFSEENGYINFPKRVISHTTKTQYLFRINKGMLDYDQDVN HHHHHCCCHHHHHHHHHHCCCCCCCCCEEECCHHHHHHCHHHHEEEEECCCCCCCCCCCH DHMPEDMRPIPFANMIYIGDGPTDVPCFTVMRRNGGHAVAVYNPEDETGRSFRKCYNLAS HCCCCCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHHHHHCC NSDRVNFIAPADYTPGSHLTRLLSGMVTDIANGIVRRRDRALADSCIAAPSFSK CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9403685 [H]