Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735146
Identifier: 187735146
GI number: 187735146
Start: 753071
End: 754174
Strand: Direct
Name: 187735146
Synonym: Amuc_0640
Alternate gene names: NA
Gene position: 753071-754174 (Clockwise)
Preceding gene: 187735145
Following gene: 187735147
Centisome position: 28.27
GC content: 48.64
Gene sequence:
>1104_bases ATGACACCGCAAAATCCTACAATTTTATTACCCTCATCCCGGGAACATTGGATTGACATATCCCGATTCCTCGCGGCATG CCTGATTGTATGCGTCCACGCGCCGGCCTTCTCTTTCGCCAGCCTGTTCCAGCTTCCGGTTTTCAACGGCCGCGTGGCAT TTTTCCTGATTCTGGCAGGCTATTTCATGGGCCGGAATAATTCCTGGAACAAAGCGTTCAAACGGGGTTATACGCTTCTC ATTCCCTTTCTGTTCTGGAATATAGTCATCTCTTTCCTCCATCCGGGAATCATGAATATGGGACTGCCGGAATACTTATG CAACCTTGCAGGCTTCCGCTCCCTTTTCACTCCCGATTTTATTCCTCTTTCCATCAATGGATTGACGGGAGAACCCTTTT CCCCTCCCACATGGTTTTTGAGGGATATCATTCTCTGTTCCCTCATTTCCCCCATCCTGCTGAAATTGAAATATCCGGTT TTTGTCCTGATCCTGATCTGCTTCAGCACGGACTGGCTCCAATACCCCGTGCCGGCCAACAAGATTACCCTTGCTCCATC CACCGTCTCCCTGTTCAGTCTGGGCCTTTTCCTGTCTTCCATCAAACTGGCTGAAGTAAAACACGTTTACAAAAATTCCT TTACTCCCCTCGTTCTGCTCGCCGTAGGAACCGGGTTTCTGCTCAGCATCACCAATTACTTGAGCGTTTGCCAGAATAAC CCGGAATGGAACATGCACAAAATACTGGCATCCTATGGAGTATGGAATATCTCCTGGCCGGCTGTCCGTTTGAATTCCCT CTGCCCAGTCTTCGGGGCGCTTCTTCTCATGACCCTTGGAATCTGGCTGGAAAAGAAAATTCCCGTTGCCAGAAAGCTGT CCAACTATGCTCCCGCCTGTTTCCTGATATTCGTTCTTCATTATCCTTTGATCATGCTGATCCCCTCCCACATCTGGAAA CAATCCTTTTTCGCTCCCTTTGTATTAATACCGGCCATCATTTTCCTGATCGTCGCATTCTATCTTTTCCTGAGAAAATT CTTCCCGGCCTGCCTGCCCTACGTCGCCAACGACCGCATCACCCATGTTCCCAAAAAAAATTAA
Upstream 100 bases:
>100_bases CTCCCCGAACGTCTCAAACATCCCCGGGAAACACAAAAAGCCATCTGCCCTTGAGCATTTCCCCTGCCTGCCTCAGGGGG CTCCAAAGGCAGACTCTTTC
Downstream 100 bases:
>100_bases GGCCTGTATCCTCTTTCTTCTTTTAACCGTTCCGGCCGCATTAGGCGCCGTCTGGTGCGCCAAACACGCCTACCGCTACC ATTTGGCTGTCCATCCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 367; Mature: 366
Protein sequence:
>367_residues MTPQNPTILLPSSREHWIDISRFLAACLIVCVHAPAFSFASLFQLPVFNGRVAFFLILAGYFMGRNNSWNKAFKRGYTLL IPFLFWNIVISFLHPGIMNMGLPEYLCNLAGFRSLFTPDFIPLSINGLTGEPFSPPTWFLRDIILCSLISPILLKLKYPV FVLILICFSTDWLQYPVPANKITLAPSTVSLFSLGLFLSSIKLAEVKHVYKNSFTPLVLLAVGTGFLLSITNYLSVCQNN PEWNMHKILASYGVWNISWPAVRLNSLCPVFGALLLMTLGIWLEKKIPVARKLSNYAPACFLIFVLHYPLIMLIPSHIWK QSFFAPFVLIPAIIFLIVAFYLFLRKFFPACLPYVANDRITHVPKKN
Sequences:
>Translated_367_residues MTPQNPTILLPSSREHWIDISRFLAACLIVCVHAPAFSFASLFQLPVFNGRVAFFLILAGYFMGRNNSWNKAFKRGYTLL IPFLFWNIVISFLHPGIMNMGLPEYLCNLAGFRSLFTPDFIPLSINGLTGEPFSPPTWFLRDIILCSLISPILLKLKYPV FVLILICFSTDWLQYPVPANKITLAPSTVSLFSLGLFLSSIKLAEVKHVYKNSFTPLVLLAVGTGFLLSITNYLSVCQNN PEWNMHKILASYGVWNISWPAVRLNSLCPVFGALLLMTLGIWLEKKIPVARKLSNYAPACFLIFVLHYPLIMLIPSHIWK QSFFAPFVLIPAIIFLIVAFYLFLRKFFPACLPYVANDRITHVPKKN >Mature_366_residues TPQNPTILLPSSREHWIDISRFLAACLIVCVHAPAFSFASLFQLPVFNGRVAFFLILAGYFMGRNNSWNKAFKRGYTLLI PFLFWNIVISFLHPGIMNMGLPEYLCNLAGFRSLFTPDFIPLSINGLTGEPFSPPTWFLRDIILCSLISPILLKLKYPVF VLILICFSTDWLQYPVPANKITLAPSTVSLFSLGLFLSSIKLAEVKHVYKNSFTPLVLLAVGTGFLLSITNYLSVCQNNP EWNMHKILASYGVWNISWPAVRLNSLCPVFGALLLMTLGIWLEKKIPVARKLSNYAPACFLIFVLHYPLIMLIPSHIWKQ SFFAPFVLIPAIIFLIVAFYLFLRKFFPACLPYVANDRITHVPKKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41631; Mature: 41500
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPQNPTILLPSSREHWIDISRFLAACLIVCVHAPAFSFASLFQLPVFNGRVAFFLILAG CCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH YFMGRNNSWNKAFKRGYTLLIPFLFWNIVISFLHPGIMNMGLPEYLCNLAGFRSLFTPDF HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCC IPLSINGLTGEPFSPPTWFLRDIILCSLISPILLKLKYPVFVLILICFSTDWLQYPVPAN EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KITLAPSTVSLFSLGLFLSSIKLAEVKHVYKNSFTPLVLLAVGTGFLLSITNYLSVCQNN CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC PEWNMHKILASYGVWNISWPAVRLNSLCPVFGALLLMTLGIWLEKKIPVARKLSNYAPAC CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHH FLIFVLHYPLIMLIPSHIWKQSFFAPFVLIPAIIFLIVAFYLFLRKFFPACLPYVANDRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC THVPKKN CCCCCCC >Mature Secondary Structure TPQNPTILLPSSREHWIDISRFLAACLIVCVHAPAFSFASLFQLPVFNGRVAFFLILAG CCCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCHHHHHHHHHH YFMGRNNSWNKAFKRGYTLLIPFLFWNIVISFLHPGIMNMGLPEYLCNLAGFRSLFTPDF HHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHCCCCC IPLSINGLTGEPFSPPTWFLRDIILCSLISPILLKLKYPVFVLILICFSTDWLQYPVPAN EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC KITLAPSTVSLFSLGLFLSSIKLAEVKHVYKNSFTPLVLLAVGTGFLLSITNYLSVCQNN CEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHHCCC PEWNMHKILASYGVWNISWPAVRLNSLCPVFGALLLMTLGIWLEKKIPVARKLSNYAPAC CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHH FLIFVLHYPLIMLIPSHIWKQSFFAPFVLIPAIIFLIVAFYLFLRKFFPACLPYVANDRI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC THVPKKN CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA