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The map label for this gene is yhbQ [C]

Identifier: 186476922

GI number: 186476922

Start: 2434304

End: 2434636

Strand: Direct

Name: yhbQ [C]

Synonym: Bphy_2171

Alternate gene names: 186476922

Gene position: 2434304-2434636 (Clockwise)

Preceding gene: 186476921

Following gene: 186476923

Centisome position: 69.97

GC content: 65.17

Gene sequence:

>333_bases
ATGCCGTGGTTTCTGTATCTGATCGAATGCTCGGACGGCAGCGTCTACACGGGCATTGCCACTGACGTGCAAGCCCGCTA
CGACAAGCACGCGAGCGGCATGGGCGCACGCTACACGCGCTCGCGCAAGCCGGTGCGTCTGTTGGCGTCCTTCGAACTGG
CCGACCGGTCCAGCGCGTCGCGCGCCGAGTATCGCGTGAAACAACTGGCGCCCGCGCAGAAGTGGGAACTGGCGTCGGGC
ACACGGACGCTCGAGTCCGTGCTGCCGGCTTCGGAACACGCCGCGCAAGAAGCTGCGGAAATAGCCGCCTCGATGGACAG
CACACAAGCCTGA

Upstream 100 bases:

>100_bases
TGCGCACTTCCTCGACAACGAGAAAAATCACATTCACGCGTACGTCGACGAACTGCGCGAACACAATCCGTTCAGGGAAT
AACCGGGGAATTCGCGCGCC

Downstream 100 bases:

>100_bases
CGCGCTGCAGCGCGTCATCCGCTTTCACTCGCACTGGCAGCAACAGTGTTTTCACGATTCGCCTCTCGACGCGCATCCGG
CGCGATCGGATACTTTCGTC

Product: excinuclease ABC subunit C

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MPWFLYLIECSDGSVYTGIATDVQARYDKHASGMGARYTRSRKPVRLLASFELADRSSASRAEYRVKQLAPAQKWELASG
TRTLESVLPASEHAAQEAAEIAASMDSTQA

Sequences:

>Translated_110_residues
MPWFLYLIECSDGSVYTGIATDVQARYDKHASGMGARYTRSRKPVRLLASFELADRSSASRAEYRVKQLAPAQKWELASG
TRTLESVLPASEHAAQEAAEIAASMDSTQA
>Mature_109_residues
PWFLYLIECSDGSVYTGIATDVQARYDKHASGMGARYTRSRKPVRLLASFELADRSSASRAEYRVKQLAPAQKWELASGT
RTLESVLPASEHAAQEAAEIAASMDSTQA

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0213 family [H]

Homologues:

Organism=Escherichia coli, GI1789545, Length=78, Percent_Identity=52.5641025641026, Blast_Score=85, Evalue=9e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000305 [H]

Pfam domain/function: PF01541 GIY-YIG [H]

EC number: NA

Molecular weight: Translated: 12056; Mature: 11924

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPWFLYLIECSDGSVYTGIATDVQARYDKHASGMGARYTRSRKPVRLLASFELADRSSAS
CCEEEEEEECCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
RAEYRVKQLAPAQKWELASGTRTLESVLPASEHAAQEAAEIAASMDSTQA
HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PWFLYLIECSDGSVYTGIATDVQARYDKHASGMGARYTRSRKPVRLLASFELADRSSAS
CEEEEEEECCCCCEEECHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCH
RAEYRVKQLAPAQKWELASGTRTLESVLPASEHAAQEAAEIAASMDSTQA
HHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA