Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186476886
Identifier: 186476886
GI number: 186476886
Start: 2399394
End: 2399747
Strand: Direct
Name: 186476886
Synonym: Bphy_2135
Alternate gene names: NA
Gene position: 2399394-2399747 (Clockwise)
Preceding gene: 186476880
Following gene: 186476887
Centisome position: 68.96
GC content: 58.47
Gene sequence:
>354_bases ATGAGAAAAGTTATCGCCGCGTTGCTGGCGGCTGGGCTGGCAGCGGGGTGCACGACAGAGCTGCAAAGGGAAGCCAAAGA GGACCGTGCGGCATTCTTGCGATGCAAACAGGCCAACCCCACGACCTGGGGCGACAAGTGTAATGCGGAATTGAACATGT ACTACACAACCGCAGGAGCTGCCCAAGCTGATTCCGCCCACCGCGCACAAACAGCGAATGCAATAGCATCGGGTCTTCTA GCAGGTGCGGCAGCAGCAGCAGCCGGGGCAGCGGCAGCGGAGGCAGCACGACCTGTTTATGTTCAGCCCGTCTATGTTCA ACCAGTTGTCATCTGTCGCTGGAATTGCTGGTGA
Upstream 100 bases:
>100_bases TCACAGCCTACGGGTTATTACCGATACGCTAGGGGGCATACGCGTCCGTTAGCCGCTCTGAGAGGGCAAAACGAATTCCC CGAAGAACGGCGGACGAATT
Downstream 100 bases:
>100_bases TCTAGCAGGACACCTTCACGTATAAGGTTCGTCGGTAGAATTGGCGTCCAACAAAAACGACGTAATGGAAATTCACGATG GGCGAGATATGGCAAACGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MRKVIAALLAAGLAAGCTTELQREAKEDRAAFLRCKQANPTTWGDKCNAELNMYYTTAGAAQADSAHRAQTANAIASGLL AGAAAAAAGAAAAEAARPVYVQPVYVQPVVICRWNCW
Sequences:
>Translated_117_residues MRKVIAALLAAGLAAGCTTELQREAKEDRAAFLRCKQANPTTWGDKCNAELNMYYTTAGAAQADSAHRAQTANAIASGLL AGAAAAAAGAAAAEAARPVYVQPVYVQPVVICRWNCW >Mature_117_residues MRKVIAALLAAGLAAGCTTELQREAKEDRAAFLRCKQANPTTWGDKCNAELNMYYTTAGAAQADSAHRAQTANAIASGLL AGAAAAAAGAAAAEAARPVYVQPVYVQPVVICRWNCW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12182; Mature: 12182
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKVIAALLAAGLAAGCTTELQREAKEDRAAFLRCKQANPTTWGDKCNAELNMYYTTAGA CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCC AQADSAHRAQTANAIASGLLAGAAAAAAGAAAAEAARPVYVQPVYVQPVVICRWNCW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEEEEEEECCC >Mature Secondary Structure MRKVIAALLAAGLAAGCTTELQREAKEDRAAFLRCKQANPTTWGDKCNAELNMYYTTAGA CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCEEEEEEEECCC AQADSAHRAQTANAIASGLLAGAAAAAAGAAAAEAARPVYVQPVYVQPVVICRWNCW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA