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The map label for this gene is rng [H]

Identifier: 186476825

GI number: 186476825

Start: 2321802

End: 2323271

Strand: Direct

Name: rng [H]

Synonym: Bphy_2071

Alternate gene names: 186476825

Gene position: 2321802-2323271 (Clockwise)

Preceding gene: 186476824

Following gene: 186476826

Centisome position: 66.73

GC content: 59.86

Gene sequence:

>1470_bases
ATGAACGAAGAAATCCTGATTAACGTTACGCCACAGGAGACGCGCGTAGCGTTGGTCCAGCAGGGCGCAGTGCAGGAGCT
TCACGTCGAACGCACGCTGTCGCGCGGGCGGGTCGGCAATGTCTACCTCGGCAAGGTTGTGCGCGTGCTGCCCGGCATGC
AGTCCGCGTTTATCGATATCGGTTTGGAACGGGCTGCGTTTCTGCACGTCGCCGATATCTGGCATCCGCGGCTTGCGGGC
GAACCGCAGCAACAGGTGCCGCATCAGCCCATCGAAAAAATCGTCTTCGAAGGGCAAACCTTGATGGTTCAGGTCGTCAA
GGATCCAATCGGCACGAAAGGCGCGCGGCTCTCGACGCAGGTGAGCATCGCCGGGCGCACGCTCGTTTACCTGCCGCAGG
AACCGCATATCGGCATCTCGCAGAAGATCGAAAGCGAAGCCGAGCGCGAAGCCGTGCGTGCACGGCTCACGTCGGTGCTG
CCCGTCGACGAGAAAGGCGGCTACATCGTTCGCACCATCGCTGAAGACGCAACGAGCGAAGAACTGGCCGCCGACGTCGC
GTATCTCCGCAAGACGTGGGCGACCATACTCTCGCAGGCGCAGCGCATGCCGCCCACCAGCTTGCTCTATCAGGATCTGA
ATCTCGCGCAGCGCGTGCTGCGCGACTTTGTCAACGACGAGACCACGCGCATTCAGGTGGATTCACGCGAGACATTCCAG
ATGCTCACGGAGTTCGCCGCCGAGTTCACACCAGCTGTTTCGTCGAAGCTGCATCATTACACGGGCGAGCGTCCCCTCTT
CGATCTCTACAACATCGAGACGGAGATCCAGCGTGCATTATCGCGGCGGGTAGATCTGAAGTCGGGCGGCTATCTGGTGA
TCGACCAGACGGAAGCGATGACGACCATCGACGTCAACACGGGCGGCTATGTCGGCGCACGCAATTTCGACGATACGATT
TTCAAGACCAATCTCGAAGCGGCGCATACGATCGCGCGGCAATTGCGGCTGCGCAACCTGGGCGGCGTGATCATCATCGA
CTTCATCGACATGGAGAACTCCGAGCATCGGGATCAGGTGCTCGGAGAACTGAAGAAGGCGCTCGCACGCGACCGCACGC
GTGTGACCGTCAACGGGTTCTCGCAGTTGGGCCTCGTCGAAATGACGCGAAAGCGCACGCGTGAATCGCTTGCGCATGTG
CTGTGCGAGCCTTGCCCGGTTTGTCAGGGCAAGGGGCAGGTGAAGACGGCGCGCACTGTCTGCTATGACGTGCTGCGTGA
AATTCTGAGGGAGTCCCGTCAATTCAATCCGCGCGAGTTTCGCGTGGTGGCTTCGCAGCAGGTGATCGATCTGTTCCTGG
AGGAAGAATCCCAGCATTTGGCGATGTTGATCGACTTCATCGGCAAGCCGGTGTCGCTGCAGGTCGAGTCCAATTTGAGC
CAGGAGCAATACGACATCGTGCTGATGTGA

Upstream 100 bases:

>100_bases
CGAACATATTGACGGGTCCTATTCAGGTATTATGGGTTTGCCATTGTTTGAAACCGCTGCCCTTCTACGTGCGGCGCGCA
TCGACTTTTAGAACAACACC

Downstream 100 bases:

>100_bases
TCCCATCGCTCCGCACACGTTACCTCTGGGCACAGGGCTTGCTTAACCGCATTCGACACTGCCGCCGGGAGGCCACATGC
GCTCCGAACGCTACGACTAC

Product: ribonuclease

Products: NA

Alternate protein names: RNase G; Cytoplasmic axial filament protein [H]

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVL
PVDEKGGYIVRTIAEDATSEELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETFQ
MLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEHRDQVLGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPVCQGKGQVKTARTVCYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Sequences:

>Translated_489_residues
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVL
PVDEKGGYIVRTIAEDATSEELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETFQ
MLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEHRDQVLGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPVCQGKGQVKTARTVCYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM
>Mature_489_residues
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDIGLERAAFLHVADIWHPRLAG
EPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQVSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVL
PVDEKGGYIVRTIAEDATSEELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETFQ
MLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAMTTIDVNTGGYVGARNFDDTI
FKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEHRDQVLGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHV
LCEPCPVCQGKGQVKTARTVCYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
QEQYDIVLM

Specific function: Involved in the processing of the 5'-end of 16S rRNA. Could be involved in chromosome segregation and cell division. It may be one of the components of the cytoplasmic axial filaments bundles or merely regulate the formation of this structure [H]

COG id: COG1530

COG function: function code J; Ribonucleases G and E

Gene ontology:

Cell location: Cytoplasm, cytoskeleton [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Escherichia coli, GI87082235, Length=493, Percent_Identity=56.3894523326572, Blast_Score=550, Evalue=1e-158,
Organism=Escherichia coli, GI1787325, Length=461, Percent_Identity=37.3101952277657, Blast_Score=282, Evalue=3e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR019307
- InterPro:   IPR022967
- InterPro:   IPR004659 [H]

Pfam domain/function: PF10150 RNase_E_G; PF00575 S1 [H]

EC number: 3.1.4.- [C]

Molecular weight: Translated: 55167; Mature: 55167

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ
HHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVLPVDEKGGYIVRTIAEDATSE
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
ELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETFQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
MLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAM
HHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEHRDQV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
LGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTARTV
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC
>Mature Secondary Structure
MNEEILINVTPQETRVALVQQGAVQELHVERTLSRGRVGNVYLGKVVRVLPGMQSAFIDI
CCCCEEEEECCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHH
GLERAAFLHVADIWHPRLAGEPQQQVPHQPIEKIVFEGQTLMVQVVKDPIGTKGARLSTQ
HHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHHHHHHCCCCEEEEEHHCCCCCCCCCEEEE
VSIAGRTLVYLPQEPHIGISQKIESEAEREAVRARLTSVLPVDEKGGYIVRTIAEDATSE
EEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHH
ELAADVAYLRKTWATILSQAQRMPPTSLLYQDLNLAQRVLRDFVNDETTRIQVDSRETFQ
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHH
MLTEFAAEFTPAVSSKLHHYTGERPLFDLYNIETEIQRALSRRVDLKSGGYLVIDQTEAM
HHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCE
TTIDVNTGGYVGARNFDDTIFKTNLEAAHTIARQLRLRNLGGVIIIDFIDMENSEHRDQV
EEEEECCCCEECCCCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHH
LGELKKALARDRTRVTVNGFSQLGLVEMTRKRTRESLAHVLCEPCPVCQGKGQVKTARTV
HHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
CYDVLREILRESRQFNPREFRVVASQQVIDLFLEEESQHLAMLIDFIGKPVSLQVESNLS
HHHHHHHHHHHHHCCCCHHEEEEHHHHHHHHHHHCCHHHHHHHHHHHCCCEEEEECCCCC
QEQYDIVLM
CCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]